FFCP PHASE1:Mm9::chr11:107289635..107289667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENSMUST00000136927,uc007maq.1_5end | |association_with_transcript=45bp_to_ENSMUST00000136927,uc007maq.1_5end | ||
|cluster_id=chr11:107289635..107289667,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000136927_5end,CAGE_peak_1_at_uc007maq.1_5end | |description=CAGE_peak_1_at_ENSMUST00000136927_5end,CAGE_peak_1_at_uc007maq.1_5end | ||
|id=chr11:107289635..107289667,+ | |id=chr11:107289635..107289667,+ | ||
|ontology_enrichment_celltype=CL:0000893!1.90e-12!6;CL:0002489!1.90e-12!6;CL:0000898!1.90e-12!6;CL:0000809!1.90e-12!6;CL:0000810!1.90e-12!6;CL:0000895!1.90e-12!6;CL:0000808!1.90e-12!6;CL:0000894!1.90e-12!6;CL:0000806!1.90e-12!6;CL:0000807!1.90e-12!6;CL:0000805!1.90e-12!6;CL:0002425!1.90e-12!6;CL:0002436!1.90e-12!6;CL:0002427!1.90e-12!6;CL:0002428!1.90e-12!6;CL:0002429!1.90e-12!6;CL:0002433!1.90e-12!6;CL:0002431!1.90e-12!6;CL:0002432!1.90e-12!6;CL:0000624!3.61e-09!8;CL:0000068!3.48e-08!3;CL:0002202!3.48e-08!3;CL:0000069!3.48e-08!3;CL:0002632!3.48e-08!3;CL:0002368!3.48e-08!3;CL:0000307!3.48e-08!3;CL:0000377!3.48e-08!3;CL:0000791!4.48e-08!9;CL:0000789!4.48e-08!9;CL:0002420!4.48e-08!9;CL:0002419!4.48e-08!9;CL:0000790!4.48e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.05e-24,3;CL:0002202,7.05e-24,3;CL:0000069,7.05e-24,3;CL:0002632,7.05e-24,3;CL:0002368,7.05e-24,3;CL:0000307,7.05e-24,3;CL:0000377,7.05e-24,3;CL:0000355,1.05e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.81e-08!3;DOID:4045!1.81e-08!3 | |ontology_enrichment_disease=DOID:0060100!1.81e-08!3;DOID:4045!1.81e-08!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.81e-25,3;DOID:4045,7.81e-25,3;DOID:0050686,9.15e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0000981!1.81e-09!4;UBERON:0002495!1.81e-09!4;UBERON:0003608!1.81e-09!4;UBERON:0003826!1.81e-09!4;UBERON:0008202!1.81e-09!4;UBERON:0004375!1.81e-09!4;UBERON:0002428!1.81e-09!4;UBERON:0003464!1.81e-09!4;UBERON:0003606!1.81e-09!4;UBERON:0009749!1.81e-09!4;UBERON:0003860!1.81e-09!4;UBERON:0005856!1.81e-09!4;UBERON:0005866!1.81e-09!4;UBERON:0007828!1.81e-09!4;UBERON:0005254!1.81e-09!4;UBERON:0001271!1.81e-09!4;UBERON:0002091!1.81e-09!4;UBERON:0001464!1.81e-09!4;UBERON:0003285!1.81e-09!4;UBERON:0010129!1.81e-09!4;UBERON:0006234!1.81e-09!4;UBERON:0003126!3.48e-08!3;UBERON:0001005!3.48e-08!3;UBERON:0007196!3.48e-08!3;UBERON:0001558!3.48e-08!3;UBERON:0005418!1.45e-07!5;UBERON:0002472!1.45e-07!5;UBERON:0008784!1.45e-07!5;UBERON:0006058!1.45e-07!5;UBERON:0007823!1.45e-07!5;UBERON:0004709!1.45e-07!5;UBERON:0005420!1.45e-07!5;UBERON:0006057!1.45e-07!5;UBERON:0000978!1.45e-07!5;UBERON:0002103!1.45e-07!5;UBERON:0000376!1.45e-07!5;UBERON:0000154!1.45e-07!5;UBERON:0005730!1.45e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.05e-24,3;UBERON:0001005,7.05e-24,3;UBERON:0007196,7.05e-24,3;UBERON:0001558,7.05e-24,3;UBERON:0001134,1.05e-08,9;UBERON:0002036,1.05e-08,9;UBERON:0002385,1.05e-08,9;UBERON:0000486,1.05e-08,9;UBERON:0007503,1.05e-08,9;UBERON:0001015,1.05e-08,9;UBERON:0002329,1.05e-08,9;UBERON:0003082,1.05e-08,9;UBERON:0003059,1.05e-08,9;UBERON:0007282,1.05e-08,9;UBERON:0004290,1.05e-08,9;UBERON:0009618,1.05e-08,9;UBERON:0000383,6.86e-08,10;UBERON:0007524,3.21e-07,11;UBERON:0003077,3.21e-07,11;UBERON:0007285,3.21e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,1.71217968225505,0.478632953972018,0.171200729931206,0.0874204024189974,0.666219523631325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,34.7381253511633,32.0347491254758,28.7938059185589,71.1760100517527,45.0810020072574,41.2683800076481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.73192832808971,1.77351905832569,1.51657333504435,0,0,0.29688427812965,0,0,0,0,0,0,0,0,1.76922110389975,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.239630249011841,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,1.71217968225505,0.478632953972018,0.171200729931206,0.0874204024189974,0.666219523631325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,34.7381253511633,32.0347491254758,28.7938059185589,71.1760100517527,45.0810020072574,41.2683800076481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,1.73192832808971,1.77351905832569,1.51657333504435,0,0,0.29688427812965,0,0,0,0,0,0,0,0,1.76922110389975,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0.239630249011841,0,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000136927,p1@uc007maq.1 | |short_description=p1@ENSMUST00000136927,p1@uc007maq.1 | ||
}} | }} |
Latest revision as of 08:26, 5 August 2015
Short description: | p1@ENSMUST00000136927, p1@uc007maq.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000136927_5end, CAGE_peak_1_at_uc007maq.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 45bp_to_ENSMUST00000136927, uc007maq.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.05e-24 | 3 |
epithelial cell of tracheobronchial tree | 7.05e-24 | 3 |
branched duct epithelial cell | 7.05e-24 | 3 |
epithelial cell of lower respiratory tract | 7.05e-24 | 3 |
respiratory epithelial cell | 7.05e-24 | 3 |
tracheal epithelial cell | 7.05e-24 | 3 |
tracheoblast | 7.05e-24 | 3 |
multi-potent skeletal muscle stem cell | 1.05e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.05e-24 | 3 |
respiratory airway | 7.05e-24 | 3 |
tracheobronchial tree | 7.05e-24 | 3 |
lower respiratory tract | 7.05e-24 | 3 |
skeletal muscle tissue | 1.05e-08 | 9 |
striated muscle tissue | 1.05e-08 | 9 |
muscle tissue | 1.05e-08 | 9 |
multilaminar epithelium | 1.05e-08 | 9 |
epithelial vesicle | 1.05e-08 | 9 |
musculature | 1.05e-08 | 9 |
somite | 1.05e-08 | 9 |
myotome | 1.05e-08 | 9 |
presomitic mesoderm | 1.05e-08 | 9 |
presumptive segmental plate | 1.05e-08 | 9 |
dermomyotome | 1.05e-08 | 9 |
trunk paraxial mesoderm | 1.05e-08 | 9 |
musculature of body | 6.86e-08 | 10 |
dense mesenchyme tissue | 3.21e-07 | 11 |
paraxial mesoderm | 3.21e-07 | 11 |
presumptive paraxial mesoderm | 3.21e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.81e-25 | 3 |
muscle cancer | 7.81e-25 | 3 |
organ system cancer | 9.15e-13 | 6 |