FFCP PHASE1:Mm9::chr1:179726768..179726779,-: Difference between revisions
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{{FFCP|EntrezGene=11566|HGNC=|UniProt=P46664|association_with_transcript=-126bp_to_ENSMUST00000016105_5end|description=CAGE_peak_3_at_Adss_5end|id=chr1:179726768..179726779,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-10,23;CL:0000337,4.14e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.41e-10!34;UBERON:0001049!9.92e-09!52;UBERON:0005068!9.92e-09!52;UBERON:0006241!9.92e-09!52;UBERON:0007135!9.92e-09!52;UBERON:0007811!2.20e-08!86;UBERON:0000153!9.43e-08!94;UBERON:0002791!1.13e-07!29;UBERON:0003528!1.13e-07!29;UBERON:0001893!1.13e-07!29;UBERON:0000064!3.98e-07!99;UBERON:0003056!4.08e-07!49;UBERON:0002346!6.78e-07!71;UBERON:0003075!6.78e-07!71;UBERON:0007284!6.78e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.86e-14,34;UBERON:0001049,6.22e-12,52;UBERON:0005068,6.22e-12,52;UBERON:0006241,6.22e-12,52;UBERON:0007135,6.22e-12,52;UBERON:0000073,7.04e-12,54;UBERON:0002346,1.16e-11,64;UBERON:0003075,1.16e-11,64;UBERON:0007284,1.16e-11,64;UBERON:0003528,2.25e-10,29;UBERON:0002791,2.25e-10,29;UBERON:0001893,2.25e-10,29;UBERON:0010371,6.76e-09,73;UBERON:0000956,1.62e-08,21;UBERON:0001869,1.62e-08,21;UBERON:0000203,1.62e-08,21;UBERON:0003056,2.79e-08,49;UBERON:0001017,3.29e-08,73;UBERON:0002616,4.25e-08,46;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000955,9.06e-08,47;UBERON:0006238,9.06e-08,47;UBERON:0001016,9.98e-08,75;UBERON:0003080,1.90e-07,40|phase1_expression=0.640595388419176,3.48975407639361,7.73498706962211,0.60492842261366,1.00179145989269,0.839396359559449,1.86890112476421,0.903863264091034,1.54867594366833,1.40438715793196,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.404950534779652,0,0,0,0.84877930359606,3.14660173558958,0.297872853602656,0,1.59992422793407,1.37645568640302,2.8711598205751,2.58457197695445,3.44753972297422,0,0.252030129759931,1.55211357458713,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.377690453926732,0.304130793658544,0.734187008646726,0,0,0,0.388859798148567,0.419959264876088,0,1.00669563634642,1.45072428402269,0.336093799142464,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.17748185847803,1.62007125998029,1.68259969081106,1.71390590642282,2.20868540951614,1.5923803897944,1.91690942036473,0,0,1.14918604276669,1.68967186581868,1.58263545276233,2.37867873366265,3.12548022334056,0.558365998002762,0.56276261003168,1.5279824777681,1.76777151284201,2.13557521198654,3.35519002485541,0.151452386666368,0.529000920747499,0,0.860423876981386,2.03991400112325,0,0,0,0.140444420131752,0.681721290312231,0,0.70667914902068,0.422530259330042,0,0,0,3.24736561516821,5.82727690592727,3.0331466700887,0.22836775943812,0,0,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.251333182659351,0.247194967734374,0,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0.878342391034642,2.09446706813455,0.255457055208591,1.1981512450592,1.79970819298022,2.1601938602421,0.599162557619291,0.915001205637253,3.39266750704734,1.56441888173049,1.79000820131231,0.41557608911912,2.59586020908412,1.73126918545538,0.248813941220186,0,0.210441855886474,0.650602214813519,1.14951052216736,1.26043490863744,0.60281927134286,1.76894897793452,1.2811372028485,1.59292931751539,0.517406741478031,0.862271971731369,0,1.93546236580344,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,0.772043721344145,3.9782889915383,0.414251545071004,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0.658650345873152,0,1.47202963994889,5.24813523134351,0.330418782983798,0.528901133327089,0.213288250535234,0,0,0,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0.795825888164603,0,0,0.432276099749388,0.398282546508734,0.948339504765408,0.228497025219458,0,0.610953983535943,0.193952487167626,0.911765658574141,0.505892296994058,0.295220295959204,0.31399745568275,1.1105744752962,0,0,0.589676985339609,0.449724224769707,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.37898282354097,0,0,0.704070744865506,0.670025029767263,0,0.585400943573396,0.315270288212382,0.8858587585951,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,1.87538698547525,0.491804836130026,0,0.631016438832513,0.780877488593277,0,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.963963949265421,0.709700426041343,0.534196811001766,2.11753047159649,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11566 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P46664 | |||
|association_with_transcript=-126bp_to_ENSMUST00000016105_5end | |||
|cluster_id=chr1:179726768..179726779,- | |||
|description=CAGE_peak_3_at_Adss_5end | |||
|id=chr1:179726768..179726779,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-10,23;CL:0000337,4.14e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.41e-10!34;UBERON:0001049!9.92e-09!52;UBERON:0005068!9.92e-09!52;UBERON:0006241!9.92e-09!52;UBERON:0007135!9.92e-09!52;UBERON:0007811!2.20e-08!86;UBERON:0000153!9.43e-08!94;UBERON:0002791!1.13e-07!29;UBERON:0003528!1.13e-07!29;UBERON:0001893!1.13e-07!29;UBERON:0000064!3.98e-07!99;UBERON:0003056!4.08e-07!49;UBERON:0002346!6.78e-07!71;UBERON:0003075!6.78e-07!71;UBERON:0007284!6.78e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.86e-14,34;UBERON:0001049,6.22e-12,52;UBERON:0005068,6.22e-12,52;UBERON:0006241,6.22e-12,52;UBERON:0007135,6.22e-12,52;UBERON:0000073,7.04e-12,54;UBERON:0002346,1.16e-11,64;UBERON:0003075,1.16e-11,64;UBERON:0007284,1.16e-11,64;UBERON:0003528,2.25e-10,29;UBERON:0002791,2.25e-10,29;UBERON:0001893,2.25e-10,29;UBERON:0010371,6.76e-09,73;UBERON:0000956,1.62e-08,21;UBERON:0001869,1.62e-08,21;UBERON:0000203,1.62e-08,21;UBERON:0003056,2.79e-08,49;UBERON:0001017,3.29e-08,73;UBERON:0002616,4.25e-08,46;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000955,9.06e-08,47;UBERON:0006238,9.06e-08,47;UBERON:0001016,9.98e-08,75;UBERON:0003080,1.90e-07,40 | |||
|phase1_expression=0.640595388419176,3.48975407639361,7.73498706962211,0.60492842261366,1.00179145989269,0.839396359559449,1.86890112476421,0.903863264091034,1.54867594366833,1.40438715793196,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.404950534779652,0,0,0,0.84877930359606,3.14660173558958,0.297872853602656,0,1.59992422793407,1.37645568640302,2.8711598205751,2.58457197695445,3.44753972297422,0,0.252030129759931,1.55211357458713,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.377690453926732,0.304130793658544,0.734187008646726,0,0,0,0.388859798148567,0.419959264876088,0,1.00669563634642,1.45072428402269,0.336093799142464,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.17748185847803,1.62007125998029,1.68259969081106,1.71390590642282,2.20868540951614,1.5923803897944,1.91690942036473,0,0,1.14918604276669,1.68967186581868,1.58263545276233,2.37867873366265,3.12548022334056,0.558365998002762,0.56276261003168,1.5279824777681,1.76777151284201,2.13557521198654,3.35519002485541,0.151452386666368,0.529000920747499,0,0.860423876981386,2.03991400112325,0,0,0,0.140444420131752,0.681721290312231,0,0.70667914902068,0.422530259330042,0,0,0,3.24736561516821,5.82727690592727,3.0331466700887,0.22836775943812,0,0,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.251333182659351,0.247194967734374,0,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0.878342391034642,2.09446706813455,0.255457055208591,1.1981512450592,1.79970819298022,2.1601938602421,0.599162557619291,0.915001205637253,3.39266750704734,1.56441888173049,1.79000820131231,0.41557608911912,2.59586020908412,1.73126918545538,0.248813941220186,0,0.210441855886474,0.650602214813519,1.14951052216736,1.26043490863744,0.60281927134286,1.76894897793452,1.2811372028485,1.59292931751539,0.517406741478031,0.862271971731369,0,1.93546236580344,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,0.772043721344145,3.9782889915383,0.414251545071004,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0.658650345873152,0,1.47202963994889,5.24813523134351,0.330418782983798,0.528901133327089,0.213288250535234,0,0,0,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0.795825888164603,0,0,0.432276099749388,0.398282546508734,0.948339504765408,0.228497025219458,0,0.610953983535943,0.193952487167626,0.911765658574141,0.505892296994058,0.295220295959204,0.31399745568275,1.1105744752962,0,0,0.589676985339609,0.449724224769707,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.37898282354097,0,0,0.704070744865506,0.670025029767263,0,0.585400943573396,0.315270288212382,0.8858587585951,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,1.87538698547525,0.491804836130026,0,0.631016438832513,0.780877488593277,0,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.963963949265421,0.709700426041343,0.534196811001766,2.11753047159649,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0.680879211507576,0.900305470156551,0.646793418913773,0.214337035031592,0,1.07021290561242,0,0.304464949114599,0.23467170806371,0.42366414172764,0.441056796109924,0.65954501176592,0.484393280087717,0.663442174209714,0.477489376012546,0.820704498725306,0.582961673259701,1.8542530201051,0,0.206386867963223,0.555583582109135,0.753473828018764,0.27338845544205,0,1.5298058699447,0.559805809294632,1.65839968565309,0,0.632671987162271,0.203319467126849,0.324016022465404,0.209088296014469,0,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,9.01908701894705,1.04661582230785,0.66183396182839,0.583353565032143,0.904118764344118,0.506868376472335,0.821500670520278,0.781226309063701,4.71867049915699,10.6297013163443,10.0810502190253,1.89606672376907,1.21635129174099,0.821687657318618,0.909445760844565,1.43221356533985,0.993406773906324,1.32214994471966,1.18151621739662,1.9183625490148,2.209997392995,0.705783295957884,1.36441033035653,1.05833025804362,1.5193997283604,0.226730383615211,0.665957860122194,0.717710852875806,0.671538465456314,0.19318959403219,0.375364950902364,0,0.214368379079066,0,1.6942555278512,1.38097570952153,1.71868654031819,2.57779773515531,2.05524755931193,3.0215755895588,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,1.03787347584177,0.399024873401031,1.53660245178721,0.972426868273176,0.209613162627982,1.10306105070008,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.760437899670719,0.377252682772152,0.6554905522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| |||
|short_description=p3@Adss | |||
}} |
Revision as of 09:16, 5 August 2015
Short description: | p3@Adss |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Adss_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_ENSMUST00000016105_5end |
EntrezGene: | 11566 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.14e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.14e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.86e-14 | 34 |
neural tube | 6.22e-12 | 52 |
neural rod | 6.22e-12 | 52 |
future spinal cord | 6.22e-12 | 52 |
neural keel | 6.22e-12 | 52 |
regional part of nervous system | 7.04e-12 | 54 |
neurectoderm | 1.16e-11 | 64 |
neural plate | 1.16e-11 | 64 |
presumptive neural plate | 1.16e-11 | 64 |
brain grey matter | 2.25e-10 | 29 |
regional part of telencephalon | 2.25e-10 | 29 |
telencephalon | 2.25e-10 | 29 |
ecto-epithelium | 6.76e-09 | 73 |
cerebral cortex | 1.62e-08 | 21 |
cerebral hemisphere | 1.62e-08 | 21 |
pallium | 1.62e-08 | 21 |
pre-chordal neural plate | 2.79e-08 | 49 |
central nervous system | 3.29e-08 | 73 |
regional part of brain | 4.25e-08 | 46 |
regional part of forebrain | 8.35e-08 | 39 |
forebrain | 8.35e-08 | 39 |
future forebrain | 8.35e-08 | 39 |
brain | 9.06e-08 | 47 |
future brain | 9.06e-08 | 47 |
nervous system | 9.98e-08 | 75 |
anterior neural tube | 1.90e-07 | 40 |