FFCP PHASE1:Mm9::chr1:183750776..183750778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=411 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183750776..183750778,- | |||
|description=CAGE_peak_at_chr1:183750776..183750778,- | |description=CAGE_peak_at_chr1:183750776..183750778,- | ||
|id=chr1:183750776..183750778,- | |id=chr1:183750776..183750778,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-08,32;CL:0002032,1.17e-08,32;CL:0000037,1.17e-08,32;CL:0000837,1.17e-08,32;CL:0000049,4.23e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.84e-08!51;UBERON:0002405!3.71e-08!70;UBERON:0004177!5.93e-08!29;UBERON:0002390!1.62e-07!45;UBERON:0003061!1.62e-07!45;UBERON:0002193!5.74e-07!48;UBERON:0000926!9.58e-07!193;UBERON:0004120!9.58e-07!193;UBERON:0006603!9.58e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.16e-17,45;UBERON:0003061,6.16e-17,45;UBERON:0002193,2.14e-15,48;UBERON:0002405,2.14e-15,48;UBERON:0004177,1.71e-13,29;UBERON:0005057,1.71e-13,29;UBERON:0000077,2.71e-10,35;UBERON:0002370,4.03e-10,23;UBERON:0000974,4.03e-10,23;UBERON:0004807,4.03e-10,23;UBERON:0005058,4.03e-10,23;UBERON:0003351,4.03e-10,23;UBERON:0009113,4.03e-10,23;UBERON:0003295,4.03e-10,23;UBERON:0009722,4.03e-10,23;UBERON:0005562,4.03e-10,23;UBERON:0007690,4.03e-10,23;UBERON:0006562,1.53e-09,24;UBERON:0003408,1.53e-09,24;UBERON:0001557,1.53e-09,24;UBERON:0001042,1.53e-09,24;UBERON:0008814,1.53e-09,24;UBERON:0009145,1.53e-09,24;UBERON:0001041,3.88e-09,80;UBERON:0000072,4.48e-08,27;UBERON:0000490,2.14e-07,66;UBERON:0003081,2.96e-07,87;UBERON:0003929,6.79e-07,55;UBERON:0007811,7.20e-07,36 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,1.29123323441576,2.25261955442667,0.936258105287974,0.171217968225505,0.239316476986009,0.856003649656029,1.57356724354195,3.66420737997229,2.02475267389826,3.49780939064073,0.946386496074713,1.37114433605739,1.27316895539409,0.340173160604279,1.39007331681239,1.04479915655574,0.47997726838022,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,6.27797446105362,4.6880120671428,6.80580867165938,13.5293242247133,6.83045484958446,5.82612423637384,0.503587271902309,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.00828139742739,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0,0.372798891650601,0.151452386666368,0.151143120213571,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.173485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.161766849947409,1.98757366614354,0,0,0,1.46612694769419,0.510914110417183,2.03685711660064,1.79970819298022,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0.407357455401265,1.11966273549084,0,0.210441855886474,0.260240885925407,0.229902104433473,0,1.20563854268572,1.08858398642125,0.768682321709099,0.843315521037559,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,0,1.40442637462647,1.28673953557358,2.27330799516474,0.414251545071004,0.938104239924385,0.36012412292203,0.473489471170421,1.18058539048442,0.154267112887378,0.465067889500816,0.804820204198858,0.350296027101508,0,0.492502392237286,0.405344047729279,0.292399974850665,0,0.402619256281115,0.630869845692382,0.308713837137853,0,0,0.639864751605702,1.16118335930219,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.164698954724011,1.00534083520108,0.795825888164603,0.58489226135736,0,1.29682829924817,0.398282546508734,0.379335801906163,0.685491075658373,0,0.814605311381257,0.193952487167626,0.420814919341911,0.252946148497029,0,0.784993639206874,0.370191491765402,0,0.83422552858047,1.37591296579242,0.674586337154561,0.608580364165509,1.20588579876208,0.763877555344259,1.72617682470486,2.43202840162553,3.56929837144506,1.43768206527355,1.86070473834252,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0.923765950833023,0,0.162964976442026,1.18821560042632,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.8858587585951,0.478364305972461,0.655453258862952,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.321101179975584,0.35163505977661,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0.651547837414304,0.329940245945071,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,1.13025098687134,0.422190474497091,0.954978752025092,0.984845398470368,0,0,2.22132145037209,0,0.740778109478847,8.85331747922048,3.55404992074665,3.66045077130436,0.849892149969277,2.23922323717853,1.10559979043539,0,0.316335993581135,0.406638934253697,1.40406943068342,0.627264888043406,0.436725127492355,1.07891477107857,1.23980183588004,0.523511883968059,0.388844919875379,0,0,0.598066184175915,0.165458490457098,0.194451188344048,1.03327858782185,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,1.58005560314089,1.21635129174099,0.924398614483445,1.55904987573354,1.25318686967237,0.39736270956253,3.4856680360791,3.54454865218985,2.72609414859999,3.04827226619999,3.02478555410522,1.75424185331554,3.55983814069219,4.20756847853648,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.972426868273176,0,0.183843508450014,0.222246727801615,1.03017528619447,0.320919209591815,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.0574354689556133,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.376437521661322,0.761531471025089,0.365855945745545,0,0.679020569229309,0,0.474540072496697,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 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|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,1.29123323441576,2.25261955442667,0.936258105287974,0.171217968225505,0.239316476986009,0.856003649656029,1.57356724354195,3.66420737997229,2.02475267389826,3.49780939064073,0.946386496074713,1.37114433605739,1.27316895539409,0.340173160604279,1.39007331681239,1.04479915655574,0.47997726838022,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,6.27797446105362,4.6880120671428,6.80580867165938,13.5293242247133,6.83045484958446,5.82612423637384,0.503587271902309,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.00828139742739,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,0,0.220868540951614,0.367472397644862,0.287536413054709,0,0,0,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0,0.372798891650601,0.151452386666368,0.151143120213571,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0.258937883647172,0,0.173485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0.161766849947409,1.98757366614354,0,0,0,1.46612694769419,0.510914110417183,2.03685711660064,1.79970819298022,1.01656181658452,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0,0.407357455401265,1.11966273549084,0,0.210441855886474,0.260240885925407,0.229902104433473,0,1.20563854268572,1.08858398642125,0.768682321709099,0.843315521037559,0.258703370739016,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,0,1.40442637462647,1.28673953557358,2.27330799516474,0.414251545071004,0.938104239924385,0.36012412292203,0.473489471170421,1.18058539048442,0.154267112887378,0.465067889500816,0.804820204198858,0.350296027101508,0,0.492502392237286,0.405344047729279,0.292399974850665,0,0.402619256281115,0.630869845692382,0.308713837137853,0,0,0.639864751605702,1.16118335930219,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0.164698954724011,1.00534083520108,0.795825888164603,0.58489226135736,0,1.29682829924817,0.398282546508734,0.379335801906163,0.685491075658373,0,0.814605311381257,0.193952487167626,0.420814919341911,0.252946148497029,0,0.784993639206874,0.370191491765402,0,0.83422552858047,1.37591296579242,0.674586337154561,0.608580364165509,1.20588579876208,0.763877555344259,1.72617682470486,2.43202840162553,3.56929837144506,1.43768206527355,1.86070473834252,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0.923765950833023,0,0.162964976442026,1.18821560042632,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.8858587585951,0.478364305972461,0.655453258862952,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.321101179975584,0.35163505977661,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0.651547837414304,0.329940245945071,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,1.13025098687134,0.422190474497091,0.954978752025092,0.984845398470368,0,0,2.22132145037209,0,0.740778109478847,8.85331747922048,3.55404992074665,3.66045077130436,0.849892149969277,2.23922323717853,1.10559979043539,0,0.316335993581135,0.406638934253697,1.40406943068342,0.627264888043406,0.436725127492355,1.07891477107857,1.23980183588004,0.523511883968059,0.388844919875379,0,0,0.598066184175915,0.165458490457098,0.194451188344048,1.03327858782185,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0.724752362478018,0.576060012515731,1.58005560314089,1.21635129174099,0.924398614483445,1.55904987573354,1.25318686967237,0.39736270956253,3.4856680360791,3.54454865218985,2.72609414859999,3.04827226619999,3.02478555410522,1.75424185331554,3.55983814069219,4.20756847853648,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.972426868273176,0,0.183843508450014,0.222246727801615,1.03017528619447,0.320919209591815,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.0574354689556133,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.376437521661322,0.761531471025089,0.365855945745545,0,0.679020569229309,0,0.474540072496697,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr1:183750776..183750778,- | |short_description=p@chr1:183750776..183750778,- | ||
}} | }} |
Latest revision as of 10:26, 5 August 2015
Short description: | p@chr1:183750776..183750778, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183750776..183750778, - |
Coexpression cluster: | MCL_coexpression_mm9:411 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.17e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.17e-08 | 32 |
hematopoietic stem cell | 1.17e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.17e-08 | 32 |
common myeloid progenitor | 4.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.16e-17 | 45 |
blood island | 6.16e-17 | 45 |
hemolymphoid system | 2.14e-15 | 48 |
immune system | 2.14e-15 | 48 |
hemopoietic organ | 1.71e-13 | 29 |
immune organ | 1.71e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 2.71e-10 | 35 |
thymus | 4.03e-10 | 23 |
neck | 4.03e-10 | 23 |
respiratory system epithelium | 4.03e-10 | 23 |
hemolymphoid system gland | 4.03e-10 | 23 |
pharyngeal epithelium | 4.03e-10 | 23 |
thymic region | 4.03e-10 | 23 |
pharyngeal gland | 4.03e-10 | 23 |
entire pharyngeal arch endoderm | 4.03e-10 | 23 |
thymus primordium | 4.03e-10 | 23 |
early pharyngeal endoderm | 4.03e-10 | 23 |
pharynx | 1.53e-09 | 24 |
gland of gut | 1.53e-09 | 24 |
upper respiratory tract | 1.53e-09 | 24 |
chordate pharynx | 1.53e-09 | 24 |
pharyngeal arch system | 1.53e-09 | 24 |
pharyngeal region of foregut | 1.53e-09 | 24 |
foregut | 3.88e-09 | 80 |
segment of respiratory tract | 4.48e-08 | 27 |
unilaminar epithelium | 2.14e-07 | 66 |
lateral plate mesoderm | 2.96e-07 | 87 |
gut epithelium | 6.79e-07 | 55 |
craniocervical region | 7.20e-07 | 36 |