FFCP PHASE1:Mm9::chr11:114927966..114927983,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:114927966..114927983,-|id=chr11:114927966..114927983,-|ontology_enrichment_celltype=CL:0000553!6.01e-15!6;CL:0000556!6.01e-15!6;CL:0000414!2.23e-10!11;CL:0000050!1.09e-09!9;CL:0000839!8.37e-09!13;CL:0002027!2.49e-08!3;CL:0002006!2.49e-08!3;CL:0002024!2.49e-08!3;CL:0000763!6.23e-07!16|ontology_enrichment_celltype_v019_2=CL:0000553,1.64e-23,6;CL:0000556,1.64e-23,6;CL:0000839,4.98e-17,13;CL:0000050,7.89e-16,9;CL:0000763,7.22e-14,16;CL:0002027,1.24e-12,3;CL:0002006,1.24e-12,3;CL:0002024,1.24e-12,3;CL:0000049,1.07e-11,19;CL:0002031,6.56e-09,25;CL:0000988,5.75e-07,32;CL:0002032,5.75e-07,32;CL:0000037,5.75e-07,32;CL:0000837,5.75e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.21e-19!70;UBERON:0005057!5.17e-12!51;UBERON:0002193!1.63e-10!48;UBERON:0002106!4.70e-10!6;UBERON:0004457!4.70e-10!6;UBERON:0000042!4.70e-10!6;UBERON:0004854!4.70e-10!6;UBERON:0009034!4.70e-10!6;UBERON:0002095!4.70e-10!6;UBERON:0004782!4.70e-10!6;UBERON:0003281!4.70e-10!6;UBERON:0009664!4.70e-10!6;UBERON:0002296!4.70e-10!6;UBERON:0005602!4.70e-10!6;UBERON:0001179!4.70e-10!6;UBERON:0006293!4.70e-10!6;UBERON:0002390!6.39e-10!45;UBERON:0003061!6.39e-10!45;UBERON:0002365!2.81e-09!25;UBERON:0002330!2.81e-09!25;UBERON:0002107!5.94e-09!22;UBERON:0007499!5.94e-09!22;UBERON:0006925!5.94e-09!22;UBERON:0009497!5.94e-09!22;UBERON:0000015!5.94e-09!22;UBERON:0002423!5.94e-09!22;UBERON:0006235!5.94e-09!22;UBERON:0008835!5.94e-09!22;UBERON:0003894!5.94e-09!22;UBERON:0004161!5.94e-09!22;UBERON:0008836!5.94e-09!22;UBERON:0005172!9.88e-09!49;UBERON:0005173!9.88e-09!49;UBERON:0002417!9.88e-09!49;UBERON:0000916!9.88e-09!49;UBERON:0009854!1.78e-08!23;UBERON:0009856!1.78e-08!23;UBERON:0009569!2.04e-08!66;UBERON:0000926!1.73e-07!193;UBERON:0004120!1.73e-07!193;UBERON:0006603!1.73e-07!193;UBERON:0000077!3.02e-07!97;UBERON:0001041!4.82e-07!92;UBERON:0002371!6.23e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.10e-14,48;UBERON:0002405,2.10e-14,48;UBERON:0002106,6.10e-14,6;UBERON:0004457,6.10e-14,6;UBERON:0000042,6.10e-14,6;UBERON:0004854,6.10e-14,6;UBERON:0009034,6.10e-14,6;UBERON:0002095,6.10e-14,6;UBERON:0004782,6.10e-14,6;UBERON:0003281,6.10e-14,6;UBERON:0009664,6.10e-14,6;UBERON:0002296,6.10e-14,6;UBERON:0005602,6.10e-14,6;UBERON:0001179,6.10e-14,6;UBERON:0006293,6.10e-14,6;UBERON:0002371,7.22e-14,16;UBERON:0002390,3.50e-12,45;UBERON:0003061,3.50e-12,45;UBERON:0001474,4.08e-10,22;UBERON:0004765,4.08e-10,22;UBERON:0001434,4.08e-10,22;UBERON:0000029,6.88e-10,1;UBERON:0001097,6.88e-10,1;UBERON:0003968,6.88e-10,1;UBERON:0001467,6.88e-10,1;UBERON:0003887,1.31e-08,10;UBERON:0002204,5.75e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.61980213911861,0.699561878128147,1.10411757875383,0.548457734422955,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,6.52686820582452,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0.185194527369712,0.188368457004691,1.23024804948923,3.88922894451088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr11:114927966..114927983,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:114927966..114927983,- | |||
|description=CAGE_peak_at_chr11:114927966..114927983,- | |||
|id=chr11:114927966..114927983,- | |||
|ontology_enrichment_celltype=CL:0000553!6.01e-15!6;CL:0000556!6.01e-15!6;CL:0000414!2.23e-10!11;CL:0000050!1.09e-09!9;CL:0000839!8.37e-09!13;CL:0002027!2.49e-08!3;CL:0002006!2.49e-08!3;CL:0002024!2.49e-08!3;CL:0000763!6.23e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.64e-23,6;CL:0000556,1.64e-23,6;CL:0000839,4.98e-17,13;CL:0000050,7.89e-16,9;CL:0000763,7.22e-14,16;CL:0002027,1.24e-12,3;CL:0002006,1.24e-12,3;CL:0002024,1.24e-12,3;CL:0000049,1.07e-11,19;CL:0002031,6.56e-09,25;CL:0000988,5.75e-07,32;CL:0002032,5.75e-07,32;CL:0000037,5.75e-07,32;CL:0000837,5.75e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.21e-19!70;UBERON:0005057!5.17e-12!51;UBERON:0002193!1.63e-10!48;UBERON:0002106!4.70e-10!6;UBERON:0004457!4.70e-10!6;UBERON:0000042!4.70e-10!6;UBERON:0004854!4.70e-10!6;UBERON:0009034!4.70e-10!6;UBERON:0002095!4.70e-10!6;UBERON:0004782!4.70e-10!6;UBERON:0003281!4.70e-10!6;UBERON:0009664!4.70e-10!6;UBERON:0002296!4.70e-10!6;UBERON:0005602!4.70e-10!6;UBERON:0001179!4.70e-10!6;UBERON:0006293!4.70e-10!6;UBERON:0002390!6.39e-10!45;UBERON:0003061!6.39e-10!45;UBERON:0002365!2.81e-09!25;UBERON:0002330!2.81e-09!25;UBERON:0002107!5.94e-09!22;UBERON:0007499!5.94e-09!22;UBERON:0006925!5.94e-09!22;UBERON:0009497!5.94e-09!22;UBERON:0000015!5.94e-09!22;UBERON:0002423!5.94e-09!22;UBERON:0006235!5.94e-09!22;UBERON:0008835!5.94e-09!22;UBERON:0003894!5.94e-09!22;UBERON:0004161!5.94e-09!22;UBERON:0008836!5.94e-09!22;UBERON:0005172!9.88e-09!49;UBERON:0005173!9.88e-09!49;UBERON:0002417!9.88e-09!49;UBERON:0000916!9.88e-09!49;UBERON:0009854!1.78e-08!23;UBERON:0009856!1.78e-08!23;UBERON:0009569!2.04e-08!66;UBERON:0000926!1.73e-07!193;UBERON:0004120!1.73e-07!193;UBERON:0006603!1.73e-07!193;UBERON:0000077!3.02e-07!97;UBERON:0001041!4.82e-07!92;UBERON:0002371!6.23e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.10e-14,48;UBERON:0002405,2.10e-14,48;UBERON:0002106,6.10e-14,6;UBERON:0004457,6.10e-14,6;UBERON:0000042,6.10e-14,6;UBERON:0004854,6.10e-14,6;UBERON:0009034,6.10e-14,6;UBERON:0002095,6.10e-14,6;UBERON:0004782,6.10e-14,6;UBERON:0003281,6.10e-14,6;UBERON:0009664,6.10e-14,6;UBERON:0002296,6.10e-14,6;UBERON:0005602,6.10e-14,6;UBERON:0001179,6.10e-14,6;UBERON:0006293,6.10e-14,6;UBERON:0002371,7.22e-14,16;UBERON:0002390,3.50e-12,45;UBERON:0003061,3.50e-12,45;UBERON:0001474,4.08e-10,22;UBERON:0004765,4.08e-10,22;UBERON:0001434,4.08e-10,22;UBERON:0000029,6.88e-10,1;UBERON:0001097,6.88e-10,1;UBERON:0003968,6.88e-10,1;UBERON:0001467,6.88e-10,1;UBERON:0003887,1.31e-08,10;UBERON:0002204,5.75e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.61980213911861,0.699561878128147,1.10411757875383,0.548457734422955,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,6.52686820582452,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0.185194527369712,0.188368457004691,1.23024804948923,3.88922894451088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:114927966..114927983,- | |||
}} |
Latest revision as of 10:34, 5 August 2015
Short description: | p@chr11:114927966..114927983, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:114927966..114927983, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.64e-23 | 6 |
megakaryocyte | 1.64e-23 | 6 |
myeloid lineage restricted progenitor cell | 4.98e-17 | 13 |
megakaryocyte-erythroid progenitor cell | 7.89e-16 | 9 |
myeloid cell | 7.22e-14 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.24e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.24e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.24e-12 | 3 |
common myeloid progenitor | 1.07e-11 | 19 |
hematopoietic lineage restricted progenitor cell | 6.56e-09 | 25 |
hematopoietic cell | 5.75e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.75e-07 | 32 |
hematopoietic stem cell | 5.75e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.75e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.10e-14 | 48 |
immune system | 2.10e-14 | 48 |
spleen | 6.10e-14 | 6 |
cavity lining | 6.10e-14 | 6 |
serous membrane | 6.10e-14 | 6 |
gastrointestinal system mesentery | 6.10e-14 | 6 |
stomach region | 6.10e-14 | 6 |
mesentery | 6.10e-14 | 6 |
gastrointestinal system serosa | 6.10e-14 | 6 |
mesentery of stomach | 6.10e-14 | 6 |
gut mesentery | 6.10e-14 | 6 |
dorsal mesentery | 6.10e-14 | 6 |
dorsal mesogastrium | 6.10e-14 | 6 |
peritoneal cavity | 6.10e-14 | 6 |
spleen primordium | 6.10e-14 | 6 |
bone marrow | 7.22e-14 | 16 |
hematopoietic system | 3.50e-12 | 45 |
blood island | 3.50e-12 | 45 |
bone element | 4.08e-10 | 22 |
skeletal element | 4.08e-10 | 22 |
skeletal system | 4.08e-10 | 22 |
lymph node | 6.88e-10 | 1 |
axillary lymph node | 6.88e-10 | 1 |
peripheral lymph node | 6.88e-10 | 1 |
shoulder | 6.88e-10 | 1 |
intraembryonic coelom | 1.31e-08 | 10 |
musculoskeletal system | 5.75e-07 | 32 |