FFCP PHASE1:Mm9::chr1:37356727..37356782,+: Difference between revisions
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{{FFCP|EntrezGene=269180|HGNC=|MCL_coexpression_id=1585|UniProt=D3YUD3,D3YUL8,E9Q9A0,Q3UEQ1|association_with_transcript=0bp_to_ENSMUST00000027287,ENSMUST00000132401,ENSMUST00000136846,ENSMUST00000168546,NM_030266,uc007arj.1,uc007ark.1,uc007arl.2_5end|description=CAGE_peak_1_at_Inpp4a_5end|id=chr1:37356727..37356782,+|ontology_enrichment_celltype=CL:0000117!1.39e-11!23;CL:0000337!1.39e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.76e-16!52;UBERON:0005068!8.76e-16!52;UBERON:0006241!8.76e-16!52;UBERON:0007135!8.76e-16!52;UBERON:0000955!2.44e-15!50;UBERON:0006238!2.44e-15!50;UBERON:0002616!8.72e-15!49;UBERON:0002020!2.56e-14!34;UBERON:0003080!8.14e-13!40;UBERON:0000033!1.14e-12!63;UBERON:0002780!2.75e-12!39;UBERON:0001890!2.75e-12!39;UBERON:0006240!2.75e-12!39;UBERON:0002791!5.20e-12!29;UBERON:0003528!5.20e-12!29;UBERON:0001893!5.20e-12!29;UBERON:0001017!1.35e-11!73;UBERON:0005743!1.35e-11!73;UBERON:0000073!1.27e-10!75;UBERON:0001016!1.27e-10!75;UBERON:0003056!2.15e-10!49;UBERON:0002346!1.53e-09!71;UBERON:0003075!1.53e-09!71;UBERON:0007284!1.53e-09!71;UBERON:0000956!5.40e-08!21;UBERON:0001869!5.40e-08!21;UBERON:0000203!5.40e-08!21;UBERON:0007811!5.32e-07!86;UBERON:0002021!9.03e-07!10;UBERON:0000411!9.03e-07!10;UBERON:0001950!9.03e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.65e-17,54;UBERON:0001049,8.76e-16,52;UBERON:0005068,8.76e-16,52;UBERON:0006241,8.76e-16,52;UBERON:0007135,8.76e-16,52;UBERON:0002020,2.56e-14,34;UBERON:0000955,1.53e-13,47;UBERON:0006238,1.53e-13,47;UBERON:0002616,5.24e-13,46;UBERON:0003080,8.14e-13,40;UBERON:0002780,2.75e-12,39;UBERON:0001890,2.75e-12,39;UBERON:0006240,2.75e-12,39;UBERON:0003528,5.20e-12,29;UBERON:0002791,5.20e-12,29;UBERON:0001893,5.20e-12,29;UBERON:0002346,8.40e-12,64;UBERON:0003075,8.40e-12,64;UBERON:0007284,8.40e-12,64;UBERON:0001017,1.35e-11,73;UBERON:0001016,1.27e-10,75;UBERON:0003056,2.15e-10,49;UBERON:0010371,4.53e-09,73;UBERON:0004121,4.79e-08,95;UBERON:0000924,4.79e-08,95;UBERON:0006601,4.79e-08,95;UBERON:0000956,5.40e-08,21;UBERON:0001869,5.40e-08,21;UBERON:0000203,5.40e-08,21;UBERON:0002021,9.03e-07,10;UBERON:0000411,9.03e-07,10;UBERON:0001950,9.03e-07,10|phase1_expression=12.3314612270691,47.4606554389531,47.3199208965117,95.8811549842651,108.694373398357,21.9921846204576,14.7175963575181,49.97072617189,55.8931226942117,65.7721318964802,9.24577028417727,11.8860516903051,39.8897700739709,43.8850420143367,8.99396356902289,7.69406016081339,3.49780939064073,17.8236123427404,17.6877619351403,21.2194825899015,32.911753288464,10.1276770224903,7.57479388502913,8.31960598525715,9.86459908588831,27.563134277521,24.9841957772263,17.8841123129288,11.0213583284697,18.9022597319948,9.09095093686749,0,0,0,16.7533939455739,10.140313366868,14.7001936508906,143.974880973496,84.3842172085704,109.939986234498,158.822501768374,156.417416055484,144.196574850253,13.5968563413623,12.5707394712198,12.114085642671,5.47673941043627,7.19483016055474,9.88587822305123,8.36048566019419,9.09911740564856,7.18762821824858,15.268217151254,39.1695556686126,21.1739093459752,5.91696702882678,10.0286703978565,12.8918023069361,54.2208115103722,59.2469896784677,46.2696924559511,7.45457970552091,5.33576877666684,9.89889689009539,8.89979726310277,12.7886420690298,10.4860038681442,8.06858441175265,34.0101928371807,35.2365499045713,28.604194743788,58.5584518027797,56.3214779426615,29.0303194139441,39.1049521754404,34.0110951045708,84.7892283695293,89.764198673887,87.2485108895463,52.0950836534266,61.1137459264096,47.4031167206652,80.6838867113991,66.9687505937699,80.9830713217094,49.4976023595762,53.5317519804627,50.1414509270059,9.69295274664756,9.97544593409569,13.6236309689789,15.487629785665,2.03991400112325,22.1278308571505,16.8941868536394,11.6486990645307,15.308441794361,9.20323741921512,9.61208217030615,9.18682893726885,11.9716906810178,12.8326477414318,30.5766287647975,28.4426681261332,1.94841936910093,4.05375784760158,1.01104889002957,14.9580882431969,19.4203412735379,16.3286352971307,10.0621489524359,12.7875500891099,11.3001593655469,11.6056433225519,11.6412820064348,10.1789938977037,15.3260879995312,20.0993106118677,30.9613693182456,18.7649545938995,18.1090045137523,23.7588874036259,14.9113408974498,90.7620470735796,103.67611987266,22.7356779135646,10.4239158320151,11.3981518888747,10.4197586199913,68.6041128474088,75.4875994650734,59.8114716057235,88.9980519384456,110.213362109372,71.6868753730482,77.0645999571849,12.4244023897386,20.9003710624956,6.82351447770922,11.7847439296425,7.41686524887411,9.65588838620586,13.1445354757905,16.7282347797644,16.4648327946213,19.4732854832972,18.0844328400277,19.4027528054262,7.32931175971664,12.2918952109083,14.0760899331159,10.302199424096,14.4584569597311,13.9300866608867,12.9642745937004,15.9227413454795,13.3420505589515,6.94839349209731,9.94572247884574,9.94203708170409,12.8989332989603,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269180 | |||
|HGNC= | |||
|MCL_coexpression_id=1585 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YUD3,uniprot:D3YUL8,uniprot:E9Q9A0,uniprot:Q3UEQ1 | |||
|association_with_transcript=0bp_to_ENSMUST00000027287,ENSMUST00000132401,ENSMUST00000136846,ENSMUST00000168546,NM_030266,uc007arj.1,uc007ark.1,uc007arl.2_5end | |||
|cluster_id=chr1:37356727..37356782,+ | |||
|description=CAGE_peak_1_at_Inpp4a_5end | |||
|id=chr1:37356727..37356782,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.39e-11!23;CL:0000337!1.39e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.76e-16!52;UBERON:0005068!8.76e-16!52;UBERON:0006241!8.76e-16!52;UBERON:0007135!8.76e-16!52;UBERON:0000955!2.44e-15!50;UBERON:0006238!2.44e-15!50;UBERON:0002616!8.72e-15!49;UBERON:0002020!2.56e-14!34;UBERON:0003080!8.14e-13!40;UBERON:0000033!1.14e-12!63;UBERON:0002780!2.75e-12!39;UBERON:0001890!2.75e-12!39;UBERON:0006240!2.75e-12!39;UBERON:0002791!5.20e-12!29;UBERON:0003528!5.20e-12!29;UBERON:0001893!5.20e-12!29;UBERON:0001017!1.35e-11!73;UBERON:0005743!1.35e-11!73;UBERON:0000073!1.27e-10!75;UBERON:0001016!1.27e-10!75;UBERON:0003056!2.15e-10!49;UBERON:0002346!1.53e-09!71;UBERON:0003075!1.53e-09!71;UBERON:0007284!1.53e-09!71;UBERON:0000956!5.40e-08!21;UBERON:0001869!5.40e-08!21;UBERON:0000203!5.40e-08!21;UBERON:0007811!5.32e-07!86;UBERON:0002021!9.03e-07!10;UBERON:0000411!9.03e-07!10;UBERON:0001950!9.03e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.65e-17,54;UBERON:0001049,8.76e-16,52;UBERON:0005068,8.76e-16,52;UBERON:0006241,8.76e-16,52;UBERON:0007135,8.76e-16,52;UBERON:0002020,2.56e-14,34;UBERON:0000955,1.53e-13,47;UBERON:0006238,1.53e-13,47;UBERON:0002616,5.24e-13,46;UBERON:0003080,8.14e-13,40;UBERON:0002780,2.75e-12,39;UBERON:0001890,2.75e-12,39;UBERON:0006240,2.75e-12,39;UBERON:0003528,5.20e-12,29;UBERON:0002791,5.20e-12,29;UBERON:0001893,5.20e-12,29;UBERON:0002346,8.40e-12,64;UBERON:0003075,8.40e-12,64;UBERON:0007284,8.40e-12,64;UBERON:0001017,1.35e-11,73;UBERON:0001016,1.27e-10,75;UBERON:0003056,2.15e-10,49;UBERON:0010371,4.53e-09,73;UBERON:0004121,4.79e-08,95;UBERON:0000924,4.79e-08,95;UBERON:0006601,4.79e-08,95;UBERON:0000956,5.40e-08,21;UBERON:0001869,5.40e-08,21;UBERON:0000203,5.40e-08,21;UBERON:0002021,9.03e-07,10;UBERON:0000411,9.03e-07,10;UBERON:0001950,9.03e-07,10 | |||
|phase1_expression=12.3314612270691,47.4606554389531,47.3199208965117,95.8811549842651,108.694373398357,21.9921846204576,14.7175963575181,49.97072617189,55.8931226942117,65.7721318964802,9.24577028417727,11.8860516903051,39.8897700739709,43.8850420143367,8.99396356902289,7.69406016081339,3.49780939064073,17.8236123427404,17.6877619351403,21.2194825899015,32.911753288464,10.1276770224903,7.57479388502913,8.31960598525715,9.86459908588831,27.563134277521,24.9841957772263,17.8841123129288,11.0213583284697,18.9022597319948,9.09095093686749,0,0,0,16.7533939455739,10.140313366868,14.7001936508906,143.974880973496,84.3842172085704,109.939986234498,158.822501768374,156.417416055484,144.196574850253,13.5968563413623,12.5707394712198,12.114085642671,5.47673941043627,7.19483016055474,9.88587822305123,8.36048566019419,9.09911740564856,7.18762821824858,15.268217151254,39.1695556686126,21.1739093459752,5.91696702882678,10.0286703978565,12.8918023069361,54.2208115103722,59.2469896784677,46.2696924559511,7.45457970552091,5.33576877666684,9.89889689009539,8.89979726310277,12.7886420690298,10.4860038681442,8.06858441175265,34.0101928371807,35.2365499045713,28.604194743788,58.5584518027797,56.3214779426615,29.0303194139441,39.1049521754404,34.0110951045708,84.7892283695293,89.764198673887,87.2485108895463,52.0950836534266,61.1137459264096,47.4031167206652,80.6838867113991,66.9687505937699,80.9830713217094,49.4976023595762,53.5317519804627,50.1414509270059,9.69295274664756,9.97544593409569,13.6236309689789,15.487629785665,2.03991400112325,22.1278308571505,16.8941868536394,11.6486990645307,15.308441794361,9.20323741921512,9.61208217030615,9.18682893726885,11.9716906810178,12.8326477414318,30.5766287647975,28.4426681261332,1.94841936910093,4.05375784760158,1.01104889002957,14.9580882431969,19.4203412735379,16.3286352971307,10.0621489524359,12.7875500891099,11.3001593655469,11.6056433225519,11.6412820064348,10.1789938977037,15.3260879995312,20.0993106118677,30.9613693182456,18.7649545938995,18.1090045137523,23.7588874036259,14.9113408974498,90.7620470735796,103.67611987266,22.7356779135646,10.4239158320151,11.3981518888747,10.4197586199913,68.6041128474088,75.4875994650734,59.8114716057235,88.9980519384456,110.213362109372,71.6868753730482,77.0645999571849,12.4244023897386,20.9003710624956,6.82351447770922,11.7847439296425,7.41686524887411,9.65588838620586,13.1445354757905,16.7282347797644,16.4648327946213,19.4732854832972,18.0844328400277,19.4027528054262,7.32931175971664,12.2918952109083,14.0760899331159,10.302199424096,14.4584569597311,13.9300866608867,12.9642745937004,15.9227413454795,13.3420505589515,6.94839349209731,9.94572247884574,9.94203708170409,12.8989332989603,9.7233513188948,13.9679393995274,10.4285042826124,13.884040159864,10.4640275137684,12.3405764643825,11.5597688943498,13.8230273927324,16.5809138719886,18.4836885764551,19.7369983024199,22.1745616443961,19.4599307202539,65.6104639520077,37.7659927431974,37.3373224771692,13.4869788998408,9.81125952462076,13.7019636397659,10.3093969057675,11.2942773789072,12.6755484991576,11.0330863145284,25.6245693234036,7.74085087202851,14.3261069016154,14.1259095149217,16.7669114922443,20.6728463990471,20.3169766882213,29.4729084416463,7.39704813717019,13.0243304375091,14.6520056375005,11.6081256871829,13.5766741017338,12.6244475802573,12.7105439619757,9.29943932271494,10.2049173096894,8.02081565491703,9.78293669387591,5.00535317148282,3.53806191203765,5.8464149220062,7.50582449137461,11.3353265083636,9.93040821947537,17.8371605219503,17.3484692649288,13.1789478330279,24.4405951096503,16.0020607497456,19.0342980599882,12.6289438973556,13.0960111870996,27.4992807177119,22.909395580659,7.95863929436036,10.1038285394056,8.65699937453459,9.85699042811709,13.7355131102289,15.4728366575909,19.1230974900643,19.3891227250615,21.7035395855799,26.7884011344578,29.6592599635486,23.6578425156277,27.6279701890687,54.284862218138,20.1245103012923,8.35999264132362,9.93372286697037,64.2202359951168,65.5213328050416,6.72133276044369,19.9452032491455,8.83423014365519,8.19921363022941,14.0025208526319,8.36390792833932,10.4715376818725,8.49229592366497,9.71545684019746,14.9050487534769,16.2067988958075,71.3333322456412,15.7553494581178,12.2865266530406,13.3567306669932,24.9104885688529,11.9470624505967,11.1679092631291,7.55808892411878,10.3732793865744,10.335566250827,15.0643222492524,19.3821219876166,17.8131527443978,17.1118741624666,19.2782422340848,15.8127912862498,20.6271086496374,46.640225988269,11.1637878299412,9.83125996748934,12.4315480318324,18.6207245324387,22.831208653065,28.4669805641669,30.1420299623453,10.3255551548033,16.0992373856503,7.05690873775878,20.610781617685,10.333723308538,12.364149610272,12.4147237763262,12.4747083806247,18.3632927076806,53.0316363750058,16.0618627949982,15.4790150972417,12.5932278611404,9.04168593622517,11.072232445403,13.7266903923914,10.0287273696375,11.8958734475109,11.1941978781583,7.63736494412091,9.64824780422463,14.4356821660063,13.7166782843688,15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| |||
|short_description=p1@Inpp4a | |||
}} |
Revision as of 15:02, 5 August 2015
Short description: | p1@Inpp4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Inpp4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1585 |
Association with transcript: | 0bp_to_ENSMUST00000027287, ENSMUST00000132401, ENSMUST00000136846, ENSMUST00000168546, NM_030266, uc007arj.1, uc007ark.1, uc007arl.2_5end |
EntrezGene: | 269180 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.65e-17 | 54 |
neural tube | 8.76e-16 | 52 |
neural rod | 8.76e-16 | 52 |
future spinal cord | 8.76e-16 | 52 |
neural keel | 8.76e-16 | 52 |
gray matter | 2.56e-14 | 34 |
brain | 1.53e-13 | 47 |
future brain | 1.53e-13 | 47 |
regional part of brain | 5.24e-13 | 46 |
anterior neural tube | 8.14e-13 | 40 |
regional part of forebrain | 2.75e-12 | 39 |
forebrain | 2.75e-12 | 39 |
future forebrain | 2.75e-12 | 39 |
brain grey matter | 5.20e-12 | 29 |
regional part of telencephalon | 5.20e-12 | 29 |
telencephalon | 5.20e-12 | 29 |
neurectoderm | 8.40e-12 | 64 |
neural plate | 8.40e-12 | 64 |
presumptive neural plate | 8.40e-12 | 64 |
central nervous system | 1.35e-11 | 73 |
nervous system | 1.27e-10 | 75 |
pre-chordal neural plate | 2.15e-10 | 49 |
ecto-epithelium | 4.53e-09 | 73 |
ectoderm-derived structure | 4.79e-08 | 95 |
ectoderm | 4.79e-08 | 95 |
presumptive ectoderm | 4.79e-08 | 95 |
cerebral cortex | 5.40e-08 | 21 |
cerebral hemisphere | 5.40e-08 | 21 |
pallium | 5.40e-08 | 21 |
occipital lobe | 9.03e-07 | 10 |
visual cortex | 9.03e-07 | 10 |
neocortex | 9.03e-07 | 10 |