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FFCP PHASE1:Mm9::chr15:79722866..79722912,+: Difference between revisions

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{{FFCP|EntrezGene=80287|HGNC=|MCL_coexpression_id=18|UniProt=Q99J72,E9QMH1,Q3U5C5|association_with_transcript=28bp_to_ENSMUST00000100424,ENSMUST00000109620,ENSMUST00000165537,NM_001160415,NM_030255,uc007wur.2,uc007wus.2,uc007wut.2,uc011zwd.1_5end|description=CAGE_peak_1_at_Apobec3_5end|id=chr15:79722866..79722912,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.87e-15!193;UBERON:0004120!1.87e-15!193;UBERON:0006603!1.87e-15!193;UBERON:0002390!1.00e-13!45;UBERON:0003061!1.00e-13!45;UBERON:0003104!2.08e-13!131;UBERON:0009142!2.08e-13!131;UBERON:0002193!2.11e-13!48;UBERON:0002405!5.31e-11!70;UBERON:0003081!7.42e-11!88;UBERON:0000077!5.28e-09!97;UBERON:0001041!6.53e-09!92;UBERON:0002204!2.14e-08!32;UBERON:0001004!5.35e-08!42;UBERON:0004177!1.04e-07!29;UBERON:0000065!1.08e-07!41;UBERON:0001474!2.66e-07!22;UBERON:0004765!2.66e-07!22;UBERON:0001434!2.66e-07!22;UBERON:0002371!3.40e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.97e-14,45;UBERON:0003061,9.97e-14,45;UBERON:0002193,2.11e-13,48;UBERON:0002405,2.11e-13,48;UBERON:0003081,2.43e-10,87;UBERON:0000926,4.72e-09,120;UBERON:0004120,4.72e-09,120;UBERON:0006603,4.72e-09,120;UBERON:0002204,2.14e-08,32;UBERON:0001041,2.30e-08,80;UBERON:0002100,3.74e-08,90;UBERON:0001004,5.34e-08,42;UBERON:0000077,9.72e-08,35;UBERON:0004177,1.04e-07,29;UBERON:0005057,1.04e-07,29;UBERON:0000065,1.08e-07,41;UBERON:0001474,2.66e-07,22;UBERON:0004765,2.66e-07,22;UBERON:0001434,2.66e-07,22;UBERON:0002371,3.40e-07,16|phase1_expression=7.52699581392532,0.697950815278722,1.36499771816861,0.60492842261366,1.00179145989269,2.85394762250213,3.73780224952841,7.10178278928669,8.72890077340334,1.87251621057595,14.2110913627169,4.06838010876216,52.5586240888802,4.19617931611188,91.2720747374916,141.732687172878,138.513251869373,395.747286441909,384.331757396886,304.287380339188,8.92954546586233,100.184569761693,114.405507642854,6.71968175732308,7.11168771308227,2.29692785646008,4.30761996159075,3.66301095566011,2.66032787238923,2.77233142735924,5.09980174507201,2.54012269383853,2.46025915033828,0,46.5051107799552,38.8989070138872,39.4046857586372,27.204555997899,55.4748094611898,39.7878045420087,11.1763982725893,14.3439551841274,12.62326917881,19.6399036041901,23.4180711117079,35.0574296628812,16.4302182313088,16.133861572153,10.3252505885202,9.91592485278845,12.1788186814065,17.2503077237966,184.56086666351,23.211588544363,71.5879792173448,11.0621557495457,8.30946975822394,9.28209766099396,0.606949382578793,1.5869729378161,0,7.79342423759004,22.2323699027785,17.997994345628,21.7550599764734,17.0515227587064,14.6804054154018,18.8266969607562,4.45865332926454,3.10513658162888,2.94454945891935,1.71390590642282,2.42955395046775,2.69479758272899,3.64212789869298,5.51531271966013,3.30347642998166,1.40456071893706,1.84327839907492,1.05509030184155,1.46380229763855,1.04182674111352,0.837548997004143,0.56276261003168,1.68078072554491,3.53554302568401,3.41692033917847,1.4911955666024,4.39211921332468,5.97015324843606,56.8134397855288,8.60423876981386,1.3599426674155,0,0.649776417447669,0.448026887097336,4.49422144421606,13.8048561288227,12.7295142255406,9.54016851177919,2.95771181531029,8.98285341900225,12.7402619853323,7.11066703153331,37.8859321769625,37.7506199557897,34.88118670602,5.709193985953,759.464812737155,20.6334573300106,9.36820764537134,9.13396434936424,7.84092690670599,8.59119051149949,14.6985883919631,8.16832843642891,3.70792451601561,37.0174353714974,85.8072235391378,21.6767578929528,69.7859198334844,61.094281895038,16.775258509631,1.75668478206928,1.8850203613211,31.6766748458653,138.266653679832,92.9849233039782,141.556232959394,1.9472783122627,5.03250663100489,1.25654352112864,4.51943232499919,2.81287003063364,3.1168206683934,1.94689515681309,14.8685471221462,79.9936821022898,59.8952937487809,6.73413938836717,2.34216797332867,1.14951052216736,1.26043490863744,4.82255417074288,5.44291993210623,6.02134485338794,3.74806898238915,8.2785078636485,3.88022387279116,4.72765200419548,4.57472922826267,6.79506770525482,5.83899223373756,9.4028084960985,6.99659263787008,6.56813080501028,101.118698973106,108.08612098818,111.392091763072,3.31401236056803,5.39409937956521,5.04173772090842,5.91861838963026,8.46086196513836,5.86215028972037,7.20855228726264,6.17028823219124,7.82327793860036,3.62031669809657,13.9542344467231,14.7545233373457,14.6199987425332,24.3700627973066,18.788898626452,3.36463917702604,3.39585220851639,12.8863325363681,11.6358249331959,2.98603550749328,6.50262681209228,7.08771037271513,7.86565746031036,8.00560957841533,9.89173255785308,12.8122846617018,3.62337700392824,10.304743560811,13.5290400987983,10.9179888786707,17.9763881730844,10.3746263939853,17.922714592893,10.8110703543257,10.2823661348756,22.5415471346161,17.1067115390064,18.0375813065892,20.9004743273149,15.6826612068158,11.6612016903886,11.9319033159445,9.25478729413504,5.3361472875686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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:80287
|HGNC=
|MCL_coexpression_id=18
|TSSclassifier=NA
|UniProt=uniprot:Q99J72,uniprot:E9QMH1,uniprot:Q3U5C5
|association_with_transcript=28bp_to_ENSMUST00000100424,ENSMUST00000109620,ENSMUST00000165537,NM_001160415,NM_030255,uc007wur.2,uc007wus.2,uc007wut.2,uc011zwd.1_5end
|cluster_id=chr15:79722866..79722912,+
|description=CAGE_peak_1_at_Apobec3_5end
|id=chr15:79722866..79722912,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.87e-15!193;UBERON:0004120!1.87e-15!193;UBERON:0006603!1.87e-15!193;UBERON:0002390!1.00e-13!45;UBERON:0003061!1.00e-13!45;UBERON:0003104!2.08e-13!131;UBERON:0009142!2.08e-13!131;UBERON:0002193!2.11e-13!48;UBERON:0002405!5.31e-11!70;UBERON:0003081!7.42e-11!88;UBERON:0000077!5.28e-09!97;UBERON:0001041!6.53e-09!92;UBERON:0002204!2.14e-08!32;UBERON:0001004!5.35e-08!42;UBERON:0004177!1.04e-07!29;UBERON:0000065!1.08e-07!41;UBERON:0001474!2.66e-07!22;UBERON:0004765!2.66e-07!22;UBERON:0001434!2.66e-07!22;UBERON:0002371!3.40e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.97e-14,45;UBERON:0003061,9.97e-14,45;UBERON:0002193,2.11e-13,48;UBERON:0002405,2.11e-13,48;UBERON:0003081,2.43e-10,87;UBERON:0000926,4.72e-09,120;UBERON:0004120,4.72e-09,120;UBERON:0006603,4.72e-09,120;UBERON:0002204,2.14e-08,32;UBERON:0001041,2.30e-08,80;UBERON:0002100,3.74e-08,90;UBERON:0001004,5.34e-08,42;UBERON:0000077,9.72e-08,35;UBERON:0004177,1.04e-07,29;UBERON:0005057,1.04e-07,29;UBERON:0000065,1.08e-07,41;UBERON:0001474,2.66e-07,22;UBERON:0004765,2.66e-07,22;UBERON:0001434,2.66e-07,22;UBERON:0002371,3.40e-07,16
|phase1_expression=7.52699581392532,0.697950815278722,1.36499771816861,0.60492842261366,1.00179145989269,2.85394762250213,3.73780224952841,7.10178278928669,8.72890077340334,1.87251621057595,14.2110913627169,4.06838010876216,52.5586240888802,4.19617931611188,91.2720747374916,141.732687172878,138.513251869373,395.747286441909,384.331757396886,304.287380339188,8.92954546586233,100.184569761693,114.405507642854,6.71968175732308,7.11168771308227,2.29692785646008,4.30761996159075,3.66301095566011,2.66032787238923,2.77233142735924,5.09980174507201,2.54012269383853,2.46025915033828,0,46.5051107799552,38.8989070138872,39.4046857586372,27.204555997899,55.4748094611898,39.7878045420087,11.1763982725893,14.3439551841274,12.62326917881,19.6399036041901,23.4180711117079,35.0574296628812,16.4302182313088,16.133861572153,10.3252505885202,9.91592485278845,12.1788186814065,17.2503077237966,184.56086666351,23.211588544363,71.5879792173448,11.0621557495457,8.30946975822394,9.28209766099396,0.606949382578793,1.5869729378161,0,7.79342423759004,22.2323699027785,17.997994345628,21.7550599764734,17.0515227587064,14.6804054154018,18.8266969607562,4.45865332926454,3.10513658162888,2.94454945891935,1.71390590642282,2.42955395046775,2.69479758272899,3.64212789869298,5.51531271966013,3.30347642998166,1.40456071893706,1.84327839907492,1.05509030184155,1.46380229763855,1.04182674111352,0.837548997004143,0.56276261003168,1.68078072554491,3.53554302568401,3.41692033917847,1.4911955666024,4.39211921332468,5.97015324843606,56.8134397855288,8.60423876981386,1.3599426674155,0,0.649776417447669,0.448026887097336,4.49422144421606,13.8048561288227,12.7295142255406,9.54016851177919,2.95771181531029,8.98285341900225,12.7402619853323,7.11066703153331,37.8859321769625,37.7506199557897,34.88118670602,5.709193985953,759.464812737155,20.6334573300106,9.36820764537134,9.13396434936424,7.84092690670599,8.59119051149949,14.6985883919631,8.16832843642891,3.70792451601561,37.0174353714974,85.8072235391378,21.6767578929528,69.7859198334844,61.094281895038,16.775258509631,1.75668478206928,1.8850203613211,31.6766748458653,138.266653679832,92.9849233039782,141.556232959394,1.9472783122627,5.03250663100489,1.25654352112864,4.51943232499919,2.81287003063364,3.1168206683934,1.94689515681309,14.8685471221462,79.9936821022898,59.8952937487809,6.73413938836717,2.34216797332867,1.14951052216736,1.26043490863744,4.82255417074288,5.44291993210623,6.02134485338794,3.74806898238915,8.2785078636485,3.88022387279116,4.72765200419548,4.57472922826267,6.79506770525482,5.83899223373756,9.4028084960985,6.99659263787008,6.56813080501028,101.118698973106,108.08612098818,111.392091763072,3.31401236056803,5.39409937956521,5.04173772090842,5.91861838963026,8.46086196513836,5.86215028972037,7.20855228726264,6.17028823219124,7.82327793860036,3.62031669809657,13.9542344467231,14.7545233373457,14.6199987425332,24.3700627973066,18.788898626452,3.36463917702604,3.39585220851639,12.8863325363681,11.6358249331959,2.98603550749328,6.50262681209228,7.08771037271513,7.86565746031036,8.00560957841533,9.89173255785308,12.8122846617018,3.62337700392824,10.304743560811,13.5290400987983,10.9179888786707,17.9763881730844,10.3746263939853,17.922714592893,10.8110703543257,10.2823661348756,22.5415471346161,17.1067115390064,18.0375813065892,20.9004743273149,15.6826612068158,11.6612016903886,11.9319033159445,9.25478729413504,5.33614728756868,25.6941462802785,23.193961423358,32.6050062958038,22.9231937169008,31.835385087319,23.9348300674535,36.537409456253,48.6405680325106,26.3578956660558,10.0637744569148,22.3284568601102,12.793544597697,6.31447194867779,4.66433275156972,4.82443521363367,68.9129399321435,2.84237117655727,9.28900365719548,7.29903868833309,17.1323881250607,28.3085575076669,38.5630698235342,19.1230974900643,24.1181770482472,30.7835918611797,21.5263937687608,49.8144476735844,55.7772491426843,55.2559403781374,12.0633027151418,27.1952841909355,79.6658122290839,93.2666202509996,4.33486592967038,3.7507739709505,12.9508606847574,19.4402613947367,6.31016438832513,12.8844785617891,7.32439552291516,10.5146271099123,10.2487390077901,6.79383673893198,10.9298889452221,9.05993159525067,7.90575555893047,3.85585579706168,17.1747503102005,16.025904330053,14.985600260529,38.6030087755733,14.6019652173959,5.09839335925461,4.53485335447127,16.2200368590072,13.5838870725155,19.9832846163553,24.0338312646446,27.2650297108129,24.241821730161,24.018793603122,12.6502330289999,5.15677716240934,17.0219802876894,2.88097750450096,4.2688365648309,6.43011105094777,5.67488747655275,7.31312152168489,10.6956863391379,15.8321773539592,11.4989136951218,4.2366414172764,9.2621927183084,11.0473789470792,10.9795810153216,5.79004079310296,4.29740438411291,3.77524069413641,19.5292160542,5.37733375830478,167.453463181896,22.4961686079913,60.7438049772654,110.572284261754,193.422332225251,145.045361812935,88.3887835968048,90.4086382010831,79.6031849113481,12.4107180341965,2.37251995185852,10.5726122905961,8.2084059024569,13.381650944926,16.3771922809633,8.63131816862852,14.6296616633845,8.63794608547298,16.5907165813495,36.0376801590417,2.25477175473676,5.23307911153926,3.14371131868485,4.4723773319131,6.07051170345336,6.58928889414035,7.86293498926552,6.64042362704146,5.7672639434141,7.24752362478018,9.50499020650956,81.8468802426982,127.716885632803,155.504389147548,107.054758133703,86.8279473987285,87.4197961037566,72.1172697119813,75.7647274405581,73.7055084621478,66.0713013698849,66.0411512646305,71.5340844629783,69.2725259810372,76.7881247332908,10.2028672626845,0.887943813496259,0.0897138566094757,0,23.5691304719272,47.483666289149,61.1726425052665,40.3012552668644,30.5958983461572,2.82375921308533,1.84130094602871,1.71868654031819,4.46818274093588,4.11049511862385,0,2.70009000092722,0.900642406448441,0.453142408984205,0.51776031175182,1.66059756134683,5.58634822761443,7.34154504742777,12.1553358534147,7.96530017986333,7.16989682955055,14.0015438515018,9.68364769022803,10.2694147069381,8.84440241173291,10.8996098952803,12.6379648728671,12.4543204934944,14.2776089862858,14.3588672389033,13.8125170472091,10.7772423128716,10.6100071255038,10.3021475200827,9.71512872887022,10.6289468239479,8.69631450180754,8.34526664815623,12.7904846636449,11.1990162694243,11.5922012811597,9.3293266165114,9.73357932320019,11.1359373353607,12.3451299764702,8.66035632306471,8.56988996667402,13.5046244245997,9.29621047115796,11.5743966588685,5.49583271463481,11.9305120307158,18.9086527562503,13.390183244819,18.9708620442783,26.8966689319689
|short_description=p1@Apobec3
}}

Revision as of 15:40, 5 August 2015

Short description:p1@Apobec3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apobec3_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: 28bp_to_ENSMUST00000100424, ENSMUST00000109620, ENSMUST00000165537, NM_001160415, NM_030255, uc007wur.2, uc007wus.2, uc007wut.2, uc011zwd.1_5end
EntrezGene:80287
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apobec3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E452.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A191.27
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3141.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5138.51
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2395.75
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4384.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6304.29
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2100.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9114.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F546.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F739.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G827.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H155.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H339.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2184.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A171.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.05
Mouse Microglia, donor1.CNhs12629.11718-123C814.68
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D94.39
Mouse Schwann, donor2.CNhs12573.11746-123F95.97
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G356.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G237.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G334.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H9759.46
adrenal gland, adult.CNhs10508.49-24D720.63
adrenal gland, embryo E14.CNhs11038.406-44C59.37
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C114.70
adrenal gland, neonate N25.CNhs11223.1377-27I38.17
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H137.02
bone (os femoris), adult.CNhs10483.56-12G285.81
bone (os femoris), neonate N02.CNhs11227.1985-43F521.68
bone (os femoris), neonate N16.CNhs11225.1525-43A669.79
bone (os femoris), neonate N20.CNhs11195.1350-25C361.09
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H731.68
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7138.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D192.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4141.56
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A279.99
epididymis, adult.CNhs10490.58-23B259.90
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8101.12
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2108.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5111.39
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G113.95
heart, neonate N16.CNhs11209.782-15G114.75
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D324.37
heart, neonate N30.CNhs11202.1390-42D218.79
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A311.64
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D87.09
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A510.92
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G117.92
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F810.28
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G720.90
kidney, neonate N10.CNhs11206.758-6D515.68
kidney, neonate N20.CNhs11113.832-19I111.66
kidney, neonate N25.CNhs11122.1353-25F311.93
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F825.69
liver, embryo E13.CNhs10524.378-3H623.19
liver, embryo E14.CNhs10594.409-16E132.61
liver, embryo E15.CNhs10520.433-16D722.92
liver, embryo E16.CNhs10523.462-17F531.84
liver, embryo E17.CNhs10510.481-18A323.93
liver, embryo E18.CNhs10579.499-43G436.54
liver, neonate N00.CNhs11117.641-24F448.64
liver, neonate N03.CNhs11123.1345-25G226.36
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B168.91
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F89.29
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B617.13
lung, embryo E17.CNhs10605.480-44A628.31
lung, embryo E18.CNhs10583.1287-20I638.56
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E524.12
lung, neonate N07.CNhs11111.715-19A330.78
lung, neonate N10.CNhs11219.750-23E621.53
lung, neonate N20.CNhs11109.822-18A449.81
lung, neonate N25.CNhs11119.1359-25C755.78
lung, neonate N30.CNhs11133.1394-42H255.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.20
mammary gland, adult lactating day02.CNhs10480.595-22B679.67
mammary gland, adult pregnant day19.CNhs10476.588-5H293.27
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H716.03
ovary, neonate N00.CNhs11217.1299-22I414.99
oviduct, adult pregnant day01.CNhs10500.988-6G638.60
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I719.98
pancreas, neonate N00.CNhs11105.645-26G924.03
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D824.24
pancreas, neonate N16.CNhs11136.787-43B624.02
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I711.50
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G410.98
skin, neonate N03.CNhs11215.662-22H35.79
skin, neonate N06.CNhs11097.693-20I54.30
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G2167.45
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F260.74
spleen, neonate N10.CNhs11116.752-24D1110.57
spleen, neonate N20.CNhs11112.824-19H1193.42
spleen, neonate N25.CNhs11099.1354-25G3145.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C688.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C990.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D379.60
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D48.21
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B88.63
stomach, neonate N07.CNhs11210.718-18A914.63
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I116.59
submandibular gland, adult.CNhs10469.59-29C136.04
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B77.86
testis, neonate N07.CNhs11222.726-26I46.64
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B581.85
thymus, embryo E14.CNhs11041.402-44I4127.72
thymus, embryo E15.CNhs11005.430-45I2155.50
thymus, embryo E16.CNhs11002.456-26C5107.05
thymus, embryo E17.CNhs10581.478-18C186.83
thymus, embryo E18.CNhs10595.1273-19G487.42
thymus, neonate N02.CNhs11181.1541-43F872.12
thymus, neonate N03.CNhs11137.2104-43C775.76
thymus, neonate N06.CNhs11197.681-26C473.71
thymus, neonate N07.CNhs11211.713-19D366.07
thymus, neonate N10.CNhs11194.748-24E466.04
thymus, neonate N20.CNhs11186.820-7A271.53
thymus, neonate N25.CNhs11125.1362-25G769.27
thymus, neonate N30.CNhs11132.1393-42G276.79
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E423.57
uterus, adult pregnant day19.CNhs10497.590-15F547.48
uterus, adult.CNhs10509.92-27E561.17
vagina, adult.CNhs10502.89-27D540.30
vesicular gland, adult.CNhs10491.51-27F830.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.36
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.30
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B311.93
whole body, neonate N00.CNhs10525.657-19C218.91
whole body, neonate N01.CNhs10576.659-23C613.39
whole body, neonate N06.CNhs10515.692-21D118.97
whole body, neonate N10.CNhs10518.761-6B426.90





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system9.97e-1445
blood island9.97e-1445
hemolymphoid system2.11e-1348
immune system2.11e-1348
lateral plate mesoderm2.43e-1087
mesoderm4.72e-09120
mesoderm-derived structure4.72e-09120
presumptive mesoderm4.72e-09120
musculoskeletal system2.14e-0832
foregut2.30e-0880
trunk3.74e-0890
respiratory system5.34e-0842
mixed endoderm/mesoderm-derived structure9.72e-0835
hemopoietic organ1.04e-0729
immune organ1.04e-0729
respiratory tract1.08e-0741
bone element2.66e-0722
skeletal element2.66e-0722
skeletal system2.66e-0722
bone marrow3.40e-0716
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