FFCP PHASE1:Mm9::chr1:45984844..45984854,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=259 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:45984844..45984854,- | |||
|description=CAGE_peak_at_chr1:45984844..45984854,- | |description=CAGE_peak_at_chr1:45984844..45984854,- | ||
|id=chr1:45984844..45984854,- | |id=chr1:45984844..45984854,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000215,3.18e-07,3;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.09e-32!22;UBERON:0007499!2.09e-32!22;UBERON:0006925!2.09e-32!22;UBERON:0009497!2.09e-32!22;UBERON:0000015!2.09e-32!22;UBERON:0002423!2.09e-32!22;UBERON:0006235!2.09e-32!22;UBERON:0008835!2.09e-32!22;UBERON:0003894!2.09e-32!22;UBERON:0004161!2.09e-32!22;UBERON:0008836!2.09e-32!22;UBERON:0009854!6.93e-31!23;UBERON:0009856!6.93e-31!23;UBERON:0002365!3.29e-28!25;UBERON:0002330!3.29e-28!25;UBERON:0005172!1.24e-19!49;UBERON:0005173!1.24e-19!49;UBERON:0002417!1.24e-19!49;UBERON:0000916!1.24e-19!49;UBERON:0005256!4.06e-18!47;UBERON:0005057!1.88e-14!51;UBERON:0003914!8.95e-14!47;UBERON:0009569!9.25e-14!66;UBERON:0002368!1.53e-13!60;UBERON:0002530!2.88e-12!65;UBERON:0003929!2.20e-11!55;UBERON:0000466!5.41e-11!79;UBERON:0000949!8.85e-11!72;UBERON:0005177!5.72e-10!85;UBERON:0002405!9.37e-10!70;UBERON:0000490!4.81e-09!66;UBERON:0005911!1.55e-08!69;UBERON:0002100!3.22e-08!98;UBERON:0001041!9.69e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-20,22;UBERON:0007499,2.26e-20,22;UBERON:0006925,2.26e-20,22;UBERON:0009497,2.26e-20,22;UBERON:0000015,2.26e-20,22;UBERON:0002423,2.26e-20,22;UBERON:0006235,2.26e-20,22;UBERON:0008835,2.26e-20,22;UBERON:0003894,2.26e-20,22;UBERON:0004161,2.26e-20,22;UBERON:0008836,2.26e-20,22;UBERON:0009854,1.61e-19,23;UBERON:0009856,1.61e-19,23;UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0002365,5.10e-18,25;UBERON:0002330,5.10e-18,25;UBERON:0005256,2.64e-10,45;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0009569,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,10.1452571045587,7.74381489283248,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0.196558995113203,0,0,0.241177159752417,0,0,0.648540907100142,0.823684239564244,5.75072826109418,0.744281895337007,0.312037673114561,1.26289438973556,0.358794827043824,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,10.1452571045587,7.74381489283248,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0.196558995113203,0,0,0.241177159752417,0,0,0.648540907100142,0.823684239564244,5.75072826109418,0.744281895337007,0.312037673114561,1.26289438973556,0.358794827043824,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:45984844..45984854,- | |short_description=p@chr1:45984844..45984854,- | ||
}} | }} |
Latest revision as of 17:07, 5 August 2015
Short description: | p@chr1:45984844..45984854, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:45984844..45984854, - |
Coexpression cluster: | MCL_coexpression_mm9:259 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
fibroblast | 7.74e-19 | 1 |
hepatic stellate cell | 7.74e-19 | 1 |
barrier cell | 3.18e-07 | 3 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |