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FFCP PHASE1:Mm9::chr1:53833485..53833506,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=276
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:53833485..53833506,-
|description=CAGE_peak_at_chr1:53833485..53833506,-
|description=CAGE_peak_at_chr1:53833485..53833506,-
|id=chr1:53833485..53833506,-
|id=chr1:53833485..53833506,-
|ontology_enrichment_celltype=CL:0000838!8.92e-10!12;CL:0000791!3.44e-09!9;CL:0000789!3.44e-09!9;CL:0002420!3.44e-09!9;CL:0002419!3.44e-09!9;CL:0000790!3.44e-09!9;CL:0000084!5.26e-09!11;CL:0000827!5.26e-09!11;CL:0000542!1.29e-08!13;CL:0000051!1.29e-08!13;CL:0000624!2.40e-08!8;CL:0002031!1.74e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-16,9;CL:0000789,1.77e-16,9;CL:0002420,1.77e-16,9;CL:0002419,1.77e-16,9;CL:0000790,1.77e-16,9;CL:0000624,7.87e-15,8;CL:0000838,1.63e-14,12;CL:0000542,3.50e-13,13;CL:0000051,3.50e-13,13;CL:0002031,4.47e-13,25;CL:0000084,4.84e-13,11;CL:0000827,4.84e-13,11;CL:0000893,1.84e-11,6;CL:0002489,1.84e-11,6;CL:0000898,1.84e-11,6;CL:0000809,1.84e-11,6;CL:0000810,1.84e-11,6;CL:0000895,1.84e-11,6;CL:0000808,1.84e-11,6;CL:0000894,1.84e-11,6;CL:0000806,1.84e-11,6;CL:0000807,1.84e-11,6;CL:0000805,1.84e-11,6;CL:0002425,1.84e-11,6;CL:0002436,1.84e-11,6;CL:0002427,1.84e-11,6;CL:0002428,1.84e-11,6;CL:0002429,1.84e-11,6;CL:0002433,1.84e-11,6;CL:0002431,1.84e-11,6;CL:0002432,1.84e-11,6;CL:0000738,1.92e-09,17;CL:0002087,1.92e-09,17;CL:0000988,2.78e-09,32;CL:0002032,2.78e-09,32;CL:0000037,2.78e-09,32;CL:0000837,2.78e-09,32;CL:0000553,8.16e-07,6;CL:0000556,8.16e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!7.53e-15!29;UBERON:0002193!3.96e-14!48;UBERON:0003408!2.70e-13!24;UBERON:0002370!1.27e-12!23;UBERON:0000974!1.27e-12!23;UBERON:0004807!1.27e-12!23;UBERON:0005058!1.27e-12!23;UBERON:0003351!1.27e-12!23;UBERON:0009113!1.27e-12!23;UBERON:0003295!1.27e-12!23;UBERON:0009722!1.27e-12!23;UBERON:0005562!1.27e-12!23;UBERON:0007690!1.27e-12!23;UBERON:0002390!2.43e-12!45;UBERON:0003061!2.43e-12!45;UBERON:0006562!1.05e-11!24;UBERON:0001557!1.05e-11!24;UBERON:0001042!1.05e-11!24;UBERON:0008814!1.05e-11!24;UBERON:0009145!1.05e-11!24;UBERON:0001004!7.47e-11!42;UBERON:0000065!2.85e-10!41;UBERON:0002405!1.27e-09!70;UBERON:0000072!2.11e-09!27;UBERON:0004119!2.65e-09!130;UBERON:0000925!2.65e-09!130;UBERON:0006595!2.65e-09!130;UBERON:0001007!2.84e-09!128;UBERON:0001555!2.84e-09!128;UBERON:0007026!2.84e-09!128;UBERON:0004921!1.66e-08!126;UBERON:0004185!1.66e-08!126;UBERON:0005057!2.08e-08!51;UBERON:0000063!5.45e-08!35;UBERON:0001041!6.63e-08!92;UBERON:0003081!1.05e-07!88;UBERON:0000077!1.28e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.28e-26,48;UBERON:0002405,1.28e-26,48;UBERON:0004177,3.01e-26,29;UBERON:0005057,3.01e-26,29;UBERON:0002390,4.34e-23,45;UBERON:0003061,4.34e-23,45;UBERON:0003408,1.48e-22,24;UBERON:0002370,2.95e-21,23;UBERON:0000974,2.95e-21,23;UBERON:0004807,2.95e-21,23;UBERON:0005058,2.95e-21,23;UBERON:0003351,2.95e-21,23;UBERON:0009113,2.95e-21,23;UBERON:0003295,2.95e-21,23;UBERON:0009722,2.95e-21,23;UBERON:0005562,2.95e-21,23;UBERON:0007690,2.95e-21,23;UBERON:0000077,1.51e-20,35;UBERON:0006562,3.86e-20,24;UBERON:0001557,3.86e-20,24;UBERON:0001042,3.86e-20,24;UBERON:0008814,3.86e-20,24;UBERON:0009145,3.86e-20,24;UBERON:0001004,5.68e-19,42;UBERON:0000065,7.51e-18,41;UBERON:0000072,2.71e-17,27;UBERON:0007811,3.93e-13,36;UBERON:0001041,7.68e-12,80;UBERON:0001007,2.87e-10,116;UBERON:0001555,2.87e-10,116;UBERON:0007026,2.87e-10,116;UBERON:0000153,4.12e-10,43;UBERON:0004119,6.26e-10,118;UBERON:0000925,6.26e-10,118;UBERON:0006595,6.26e-10,118;UBERON:0003081,1.09e-09,87;UBERON:0004921,4.27e-09,114;UBERON:0005911,1.04e-08,69;UBERON:0002530,7.40e-08,65
|phase1_expression=0,0,0,0,0,0.16787927191189,0,282.392708366727,169.368832748455,407.740404852913,53.0775701499065,95.567046476413,227.18336861871,346.447054786487,3.66420737997229,6.88415909125408,0,33.4389895279732,39.351842444847,28.434106670468,3.99703463710028,0.198581902401771,0.261199789138935,1.59992422793407,1.83527424853736,0,0,0,1.52018735565099,2.26827116783938,1.10865255327652,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,39.9322602417413,264.031819692129,210.730812062325,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.605809546665472,0,0,0,0,0,0,0,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.1382745873577,70.948980119325,1.1875371125186,0,0,0,0,0.117588707135705,0,0,1.15679485535929,3.5384422077995,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,1.27728527604296,0.239630249011841,0,0.381210681219194,0,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0.101839363850316,0.622034853050465,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.56748166682099,0.877199924551994,0.878200461164203,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0.754005626400808,0.198956472041151,1.55971269695296,0.898819408654221,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0,0.482443521363367,5.54259570499814,0,0,0,0,0.167506257441816,0,0.390267295715598,1.26108115284953,0.44292937929755,1.59454768657487,3.4411296090305,4.31712454664739,2.4590339958857,0,0,1.96705709207614,2.75936746304733,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.484393280087717,0,0.119372344003136,0,0.874442509889552,0,9.22702756308404,0,1.11116716421827,2.82552685507037,7.92826520781946,9.60868327467395,0,0.279902904647316,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,6.21339313086926,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,50.5617793005085,0.405450430580328,0.924398614483445,4.02754551231165,5.90788095702689,22.2523117355017,30.1690578295122,32.1963169240578,29.2802704849628,22.40480115657,34.9866862424837,50.6780979846713,49.356674761489,52.8283597860692,0,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0,0.501572104035363,0,1.38097570952153,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0,0.0846146078916765,0.548783918618318,0.263069711437843,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0,0.695603506861264
|phase1_expression=0,0,0,0,0,0.16787927191189,0,282.392708366727,169.368832748455,407.740404852913,53.0775701499065,95.567046476413,227.18336861871,346.447054786487,3.66420737997229,6.88415909125408,0,33.4389895279732,39.351842444847,28.434106670468,3.99703463710028,0.198581902401771,0.261199789138935,1.59992422793407,1.83527424853736,0,0,0,1.52018735565099,2.26827116783938,1.10865255327652,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,39.9322602417413,264.031819692129,210.730812062325,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.605809546665472,0,0,0,0,0,0,0,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.1382745873577,70.948980119325,1.1875371125186,0,0,0,0,0.117588707135705,0,0,1.15679485535929,3.5384422077995,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,1.27728527604296,0.239630249011841,0,0.381210681219194,0,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0.101839363850316,0.622034853050465,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.56748166682099,0.877199924551994,0.878200461164203,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0.754005626400808,0.198956472041151,1.55971269695296,0.898819408654221,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0,0.482443521363367,5.54259570499814,0,0,0,0,0.167506257441816,0,0.390267295715598,1.26108115284953,0.44292937929755,1.59454768657487,3.4411296090305,4.31712454664739,2.4590339958857,0,0,1.96705709207614,2.75936746304733,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.484393280087717,0,0.119372344003136,0,0.874442509889552,0,9.22702756308404,0,1.11116716421827,2.82552685507037,7.92826520781946,9.60868327467395,0,0.279902904647316,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,6.21339313086926,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,50.5617793005085,0.405450430580328,0.924398614483445,4.02754551231165,5.90788095702689,22.2523117355017,30.1690578295122,32.1963169240578,29.2802704849628,22.40480115657,34.9866862424837,50.6780979846713,49.356674761489,52.8283597860692,0,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0,0.501572104035363,0,1.38097570952153,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0,0.0846146078916765,0.548783918618318,0.263069711437843,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0,0.695603506861264
|short_description=p@chr1:53833485..53833506,-
|short_description=p@chr1:53833485..53833506,-
}}
}}

Latest revision as of 18:16, 5 August 2015

Short description:p@chr1:53833485..53833506, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:53833485..53833506, -
Coexpression cluster:MCL_coexpression_mm9:276
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr1:53833485..53833506-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9282.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7169.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2407.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E653.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F195.57
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4227.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8346.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.44
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A439.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A239.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9264.03
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1210.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H970.95
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G39.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B550.56
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G422.25
thymus, neonate N02.CNhs11181.1541-43F830.17
thymus, neonate N03.CNhs11137.2104-43C732.20
thymus, neonate N06.CNhs11197.681-26C429.28
thymus, neonate N07.CNhs11211.713-19D322.40
thymus, neonate N10.CNhs11194.748-24E434.99
thymus, neonate N20.CNhs11186.820-7A250.68
thymus, neonate N25.CNhs11125.1362-25G749.36
thymus, neonate N30.CNhs11132.1393-42G252.83
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.77e-169
alpha-beta T cell1.77e-169
immature T cell1.77e-169
mature T cell1.77e-169
immature alpha-beta T cell1.77e-169
CD4-positive, alpha-beta T cell7.87e-158
lymphoid lineage restricted progenitor cell1.63e-1412
lymphocyte3.50e-1313
common lymphoid progenitor3.50e-1313
hematopoietic lineage restricted progenitor cell4.47e-1325
T cell4.84e-1311
pro-T cell4.84e-1311
thymocyte1.84e-116
double negative thymocyte1.84e-116
naive T cell1.84e-116
double-positive, alpha-beta thymocyte1.84e-116
CD4-positive, alpha-beta thymocyte1.84e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.84e-116
DN4 thymocyte1.84e-116
DN1 thymic pro-T cell1.84e-116
DN2 thymocyte1.84e-116
DN3 thymocyte1.84e-116
immature single positive thymocyte1.84e-116
early T lineage precursor1.84e-116
mature CD4 single-positive thymocyte1.84e-116
resting double-positive thymocyte1.84e-116
double-positive blast1.84e-116
CD69-positive double-positive thymocyte1.84e-116
CD69-positive, CD4-positive single-positive thymocyte1.84e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.84e-116
CD24-positive, CD4 single-positive thymocyte1.84e-116
leukocyte1.92e-0917
nongranular leukocyte1.92e-0917
hematopoietic cell2.78e-0932
hematopoietic oligopotent progenitor cell2.78e-0932
hematopoietic stem cell2.78e-0932
hematopoietic multipotent progenitor cell2.78e-0932
megakaryocyte progenitor cell8.16e-076
megakaryocyte8.16e-076

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.28e-2648
immune system1.28e-2648
hemopoietic organ3.01e-2629
immune organ3.01e-2629
hematopoietic system4.34e-2345
blood island4.34e-2345
gland of gut1.48e-2224
thymus2.95e-2123
neck2.95e-2123
respiratory system epithelium2.95e-2123
hemolymphoid system gland2.95e-2123
pharyngeal epithelium2.95e-2123
thymic region2.95e-2123
pharyngeal gland2.95e-2123
entire pharyngeal arch endoderm2.95e-2123
thymus primordium2.95e-2123
early pharyngeal endoderm2.95e-2123
mixed endoderm/mesoderm-derived structure1.51e-2035
pharynx3.86e-2024
upper respiratory tract3.86e-2024
chordate pharynx3.86e-2024
pharyngeal arch system3.86e-2024
pharyngeal region of foregut3.86e-2024
respiratory system5.68e-1942
respiratory tract7.51e-1841
segment of respiratory tract2.71e-1727
craniocervical region3.93e-1336
foregut7.68e-1280
digestive system2.87e-10116
digestive tract2.87e-10116
primitive gut2.87e-10116
anterior region of body4.12e-1043
endoderm-derived structure6.26e-10118
endoderm6.26e-10118
presumptive endoderm6.26e-10118
lateral plate mesoderm1.09e-0987
subdivision of digestive tract4.27e-09114
endo-epithelium1.04e-0869
gland7.40e-0865
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