FFCP PHASE1:Mm9::chr6:42930664..42930665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENSMUST00000167638_5end | |association_with_transcript=-23bp_to_ENSMUST00000167638_5end | ||
|cluster_id=chr6:42930664..42930665,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000167638_5end | |description=CAGE_peak_1_at_ENSMUST00000167638_5end | ||
|id=chr6:42930664..42930665,+ | |id=chr6:42930664..42930665,+ | ||
|ontology_enrichment_celltype=CL:0000553!1.13e-28!6;CL:0000556!1.13e-28!6;CL:0000050!3.74e-19!9;CL:0000414!1.11e-15!11;CL:0000839!2.84e-13!13;CL:0000763!8.80e-11!16;CL:0002027!5.01e-10!3;CL:0002006!5.01e-10!3;CL:0002024!5.01e-10!3;CL:0002031!1.22e-09!25;CL:0000049!4.51e-09!19;CL:0000945!4.80e-08!1;CL:0000236!4.80e-08!1;CL:0000826!4.80e-08!1;CL:0000988!1.85e-07!32;CL:0002032!1.85e-07!32;CL:0000037!1.85e-07!32;CL:0000566!1.85e-07!32;CL:0000837!1.85e-07!32 | |ontology_enrichment_celltype=CL:0000553!1.13e-28!6;CL:0000556!1.13e-28!6;CL:0000050!3.74e-19!9;CL:0000414!1.11e-15!11;CL:0000839!2.84e-13!13;CL:0000763!8.80e-11!16;CL:0002027!5.01e-10!3;CL:0002006!5.01e-10!3;CL:0002024!5.01e-10!3;CL:0002031!1.22e-09!25;CL:0000049!4.51e-09!19;CL:0000945!4.80e-08!1;CL:0000236!4.80e-08!1;CL:0000826!4.80e-08!1;CL:0000988!1.85e-07!32;CL:0002032!1.85e-07!32;CL:0000037!1.85e-07!32;CL:0000566!1.85e-07!32;CL:0000837!1.85e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.60e-22,6;CL:0000556,1.60e-22,6;CL:0000050,2.64e-15,9;CL:0000839,7.76e-11,13;CL:0000763,6.12e-09,16;CL:0000049,1.23e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!1.78e-21!3;UBERON:0001962!1.23e-14!2;UBERON:0001961!1.23e-14!2;UBERON:0001744!1.23e-14!2;UBERON:0002193!7.86e-11!48;UBERON:0002371!8.80e-11!16;UBERON:0000029!1.56e-08!1;UBERON:0001097!1.56e-08!1;UBERON:0003968!1.56e-08!1;UBERON:0008785!1.56e-08!1;UBERON:0001467!1.56e-08!1;UBERON:0001421!1.56e-08!1;UBERON:0003199!5.62e-08!1;UBERON:0001255!6.57e-08!1;UBERON:0001556!6.57e-08!1;UBERON:0001474!7.96e-08!22;UBERON:0004765!7.96e-08!22;UBERON:0001434!7.96e-08!22;UBERON:0002405!3.93e-07!70 | |ontology_enrichment_uberon=UBERON:0002465!1.78e-21!3;UBERON:0001962!1.23e-14!2;UBERON:0001961!1.23e-14!2;UBERON:0001744!1.23e-14!2;UBERON:0002193!7.86e-11!48;UBERON:0002371!8.80e-11!16;UBERON:0000029!1.56e-08!1;UBERON:0001097!1.56e-08!1;UBERON:0003968!1.56e-08!1;UBERON:0008785!1.56e-08!1;UBERON:0001467!1.56e-08!1;UBERON:0001421!1.56e-08!1;UBERON:0003199!5.62e-08!1;UBERON:0001255!6.57e-08!1;UBERON:0001556!6.57e-08!1;UBERON:0001474!7.96e-08!22;UBERON:0004765!7.96e-08!22;UBERON:0001434!7.96e-08!22;UBERON:0002405!3.93e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.59e-20,3;UBERON:0000029,3.44e-16,1;UBERON:0001097,3.44e-16,1;UBERON:0003968,3.44e-16,1;UBERON:0001467,3.44e-16,1;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002371,6.12e-09,16;UBERON:0001962,1.53e-08,2;UBERON:0001961,1.53e-08,2;UBERON:0001744,1.53e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0,0.946386496074713,2.05671650408608,1.27316895539409,0,0,0,1.59992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0,0.946386496074713,2.05671650408608,1.27316895539409,0,0,0,1.59992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000167638 | |short_description=p1@ENSMUST00000167638 | ||
}} | }} |
Latest revision as of 18:50, 5 August 2015
Short description: | p1@ENSMUST00000167638 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000167638_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -23bp_to_ENSMUST00000167638_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.60e-22 | 6 |
megakaryocyte | 1.60e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 2.64e-15 | 9 |
myeloid lineage restricted progenitor cell | 7.76e-11 | 13 |
myeloid cell | 6.12e-09 | 16 |
common myeloid progenitor | 1.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.59e-20 | 3 |
lymph node | 3.44e-16 | 1 |
axillary lymph node | 3.44e-16 | 1 |
peripheral lymph node | 3.44e-16 | 1 |
shoulder | 3.44e-16 | 1 |
hemolymphoid system | 2.55e-11 | 48 |
immune system | 2.55e-11 | 48 |
bone marrow | 6.12e-09 | 16 |
gut-associated lymphoid tissue | 1.53e-08 | 2 |
mucosa-associated lymphoid tissue | 1.53e-08 | 2 |
lymphoid tissue | 1.53e-08 | 2 |