FFCP PHASE1:Mm9::chr18:40430194..40430203,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:40430194..40430203,+ to FFCP PHASE1:Mm9::chr18:40430194..40430203,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:40430194..40430203,+ | |||
|description=CAGE_peak_at_chr18:40430194..40430203,+ | |||
|id=chr18:40430194..40430203,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.04e-32!10;UBERON:0000411!1.04e-32!10;UBERON:0001950!1.04e-32!10;UBERON:0002619!1.90e-18!17;UBERON:0000956!1.46e-14!21;UBERON:0001869!1.46e-14!21;UBERON:0000203!1.46e-14!21;UBERON:0002791!2.23e-14!29;UBERON:0003528!2.23e-14!29;UBERON:0001893!2.23e-14!29;UBERON:0002020!4.79e-14!34;UBERON:0002616!4.18e-12!49;UBERON:0003056!4.54e-12!49;UBERON:0002780!6.59e-12!39;UBERON:0001890!6.59e-12!39;UBERON:0006240!6.59e-12!39;UBERON:0000955!8.44e-12!50;UBERON:0006238!8.44e-12!50;UBERON:0003080!1.53e-11!40;UBERON:0000033!1.75e-11!63;UBERON:0001049!2.67e-11!52;UBERON:0005068!2.67e-11!52;UBERON:0006241!2.67e-11!52;UBERON:0007135!2.67e-11!52;UBERON:0000153!7.41e-11!94;UBERON:0002346!7.55e-10!71;UBERON:0003075!7.55e-10!71;UBERON:0007284!7.55e-10!71;UBERON:0007811!1.69e-08!86;UBERON:0001017!3.03e-08!73;UBERON:0005743!3.03e-08!73;UBERON:0000073!6.17e-08!75;UBERON:0001016!6.17e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.31e-86,10;UBERON:0000411,1.31e-86,10;UBERON:0001950,1.31e-86,10;UBERON:0002619,6.54e-51,17;UBERON:0000956,3.51e-41,21;UBERON:0001869,3.51e-41,21;UBERON:0000203,3.51e-41,21;UBERON:0003528,9.35e-30,29;UBERON:0002791,9.35e-30,29;UBERON:0001893,9.35e-30,29;UBERON:0002020,2.45e-25,34;UBERON:0002780,4.79e-22,39;UBERON:0001890,4.79e-22,39;UBERON:0006240,4.79e-22,39;UBERON:0003080,1.74e-21,40;UBERON:0002616,1.23e-18,46;UBERON:0000955,3.14e-18,47;UBERON:0006238,3.14e-18,47;UBERON:0003056,1.81e-17,49;UBERON:0001049,1.94e-16,52;UBERON:0005068,1.94e-16,52;UBERON:0006241,1.94e-16,52;UBERON:0007135,1.94e-16,52;UBERON:0000073,8.19e-16,54;UBERON:0002346,2.86e-13,64;UBERON:0003075,2.86e-13,64;UBERON:0007284,2.86e-13,64;UBERON:0010371,1.42e-11,73;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0010314,4.56e-09,92;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0000025,3.40e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.38097570952153,1.71868654031819,2.40594455281163,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,3.62513927187364,2.5888015587591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.38097570952153,1.71868654031819,2.40594455281163,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,3.62513927187364,2.5888015587591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:40430194..40430203,+ | |||
}} | }} |
Latest revision as of 19:04, 5 August 2015
Short description: | p@chr18:40430194..40430203, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:40430194..40430203, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.31e-86 | 10 |
visual cortex | 1.31e-86 | 10 |
neocortex | 1.31e-86 | 10 |
regional part of cerebral cortex | 6.54e-51 | 17 |
cerebral cortex | 3.51e-41 | 21 |
cerebral hemisphere | 3.51e-41 | 21 |
pallium | 3.51e-41 | 21 |
brain grey matter | 9.35e-30 | 29 |
regional part of telencephalon | 9.35e-30 | 29 |
telencephalon | 9.35e-30 | 29 |
gray matter | 2.45e-25 | 34 |
regional part of forebrain | 4.79e-22 | 39 |
forebrain | 4.79e-22 | 39 |
future forebrain | 4.79e-22 | 39 |
anterior neural tube | 1.74e-21 | 40 |
regional part of brain | 1.23e-18 | 46 |
brain | 3.14e-18 | 47 |
future brain | 3.14e-18 | 47 |
pre-chordal neural plate | 1.81e-17 | 49 |
neural tube | 1.94e-16 | 52 |
neural rod | 1.94e-16 | 52 |
future spinal cord | 1.94e-16 | 52 |
neural keel | 1.94e-16 | 52 |
regional part of nervous system | 8.19e-16 | 54 |
neurectoderm | 2.86e-13 | 64 |
neural plate | 2.86e-13 | 64 |
presumptive neural plate | 2.86e-13 | 64 |
ecto-epithelium | 1.42e-11 | 73 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
structure with developmental contribution from neural crest | 4.56e-09 | 92 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
tube | 3.40e-07 | 114 |