FFCP PHASE1:Mm9::chr4:94719251..94719264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-377bp_to_ENSMUST00000125917_5end | |association_with_transcript=-377bp_to_ENSMUST00000125917_5end | ||
|cluster_id=chr4:94719251..94719264,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000125917_5end | |description=CAGE_peak_2_at_ENSMUST00000125917_5end | ||
|id=chr4:94719251..94719264,+ | |id=chr4:94719251..94719264,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.09e-18,20;CL:0000066,4.98e-18,25;CL:0002563,3.51e-16,9;CL:0002251,3.51e-16,9;CL:0002076,7.20e-14,15;CL:0000075,1.32e-13,7;CL:0000239,1.80e-09,6;CL:0000677,1.80e-09,6;CL:0000584,1.80e-09,6;CL:0002250,1.45e-08,3;CL:0000815,1.83e-07,1;CL:0000792,1.83e-07,1;CL:0000213,2.11e-07,1;CL:0002078,2.11e-07,1;CL:0000115,2.11e-07,1;CL:0002262,2.11e-07,1;CL:1000398,2.11e-07,1;CL:0000624,2.72e-07,8;CL:0000710,7.23e-07,1;CL:0002077,7.23e-07,1;CL:0005014,7.23e-07,1;CL:0002315,7.23e-07,1;CL:0002490,7.23e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.02e-08,3;DOID:4045,1.02e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.23e-18,11;UBERON:0003350,3.51e-16,9;UBERON:0004808,3.51e-16,9;UBERON:0001277,3.51e-16,9;UBERON:0000490,1.64e-13,66;UBERON:0001242,3.41e-11,13;UBERON:0001262,3.41e-11,13;UBERON:0004786,3.41e-11,13;UBERON:0000344,1.08e-09,15;UBERON:0003929,1.46e-09,55;UBERON:0002394,2.11e-07,1;UBERON:0001281,2.11e-07,1;UBERON:0000353,2.11e-07,1;UBERON:0003497,2.11e-07,1;UBERON:0003909,2.11e-07,1;UBERON:0003928,2.11e-07,1;UBERON:0003835,2.11e-07,1;UBERON:0003513,2.11e-07,1;UBERON:0001280,2.11e-07,1;UBERON:0004647,2.11e-07,1;UBERON:0002294,2.11e-07,1;UBERON:0001173,2.11e-07,1;UBERON:0004912,2.11e-07,1;UBERON:0005171,2.11e-07,1;UBERON:0005911,2.29e-07,69 | |||
|phase1_expression=0.80074423552397,1.04692622291808,0,3.32710632437513,2.50447864973174,0.503637815735669,0,2.96983643915625,0.422366166455,0.234064526321993,0.171217968225505,0,1.88320802924326,1.92324885321794,0.333109761815663,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0.297872853602656,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0.866554859253824,1.16364251750945,1.63335485009895,2.09265815368454,1.5626706890476,0,9.41170380849623,0.683045484958446,0.971020706062307,0.251793635951155,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0.671130424230945,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0,0,0.244981598429908,0.383381884072945,0,0,0.255374676170375,0,0.659431438650969,0.182975287204819,0,0.837548997004143,0,0,0,0,0.559198337475902,0.151452386666368,0.226714680320357,2.6087803983151,0.860423876981386,0.679971333707751,1.61910957491345,0,0.448026887097336,0.280888840263504,0,0.259786004602869,0.35333957451034,1.12674735821344,0,5.09610479413291,0,0.216491041011214,0,0,0.45673551887624,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0.203678727700633,0,0.252722758433675,0,0.650602214813519,0.229902104433473,0.180062129805349,0,0.272145996605311,0.512454881139399,0.187403449119458,0,0.431135985865684,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0.590292695242212,0,0.232533944750408,0,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.757965647081939,0.651859905768103,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.655453258862952,0,0.289298117163023,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0.716906393857656,0.668396022247182,0.566153061577665,0.404810701674894,0,0.790575555893047,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.492422699235184,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.414599921413271,0,0.790839983952838,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0.39736270956253,0,0,0,0.228620419965,0,0,0,0,0.226730383615211,0,0.358855426437903,0.335769232728157,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0,0.824140228955577,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.192075457214608,0.17230640686684,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0,0.25384382367503,0,0.526139422875686,0,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0.695603506861264 | |phase1_expression=0.80074423552397,1.04692622291808,0,3.32710632437513,2.50447864973174,0.503637815735669,0,2.96983643915625,0.422366166455,0.234064526321993,0.171217968225505,0,1.88320802924326,1.92324885321794,0.333109761815663,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0.297872853602656,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0.866554859253824,1.16364251750945,1.63335485009895,2.09265815368454,1.5626706890476,0,9.41170380849623,0.683045484958446,0.971020706062307,0.251793635951155,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0.671130424230945,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0,0,0.244981598429908,0.383381884072945,0,0,0.255374676170375,0,0.659431438650969,0.182975287204819,0,0.837548997004143,0,0,0,0,0.559198337475902,0.151452386666368,0.226714680320357,2.6087803983151,0.860423876981386,0.679971333707751,1.61910957491345,0,0.448026887097336,0.280888840263504,0,0.259786004602869,0.35333957451034,1.12674735821344,0,5.09610479413291,0,0.216491041011214,0,0,0.45673551887624,0,0,0.346970653532272,0.608930956624282,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0.203678727700633,0,0.252722758433675,0,0.650602214813519,0.229902104433473,0.180062129805349,0,0.272145996605311,0.512454881139399,0.187403449119458,0,0.431135985865684,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0.590292695242212,0,0.232533944750408,0,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,0.210407459670956,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.757965647081939,0.651859905768103,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0.655453258862952,0,0.289298117163023,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0.716906393857656,0.668396022247182,0.566153061577665,0.404810701674894,0,0.790575555893047,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.492422699235184,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.414599921413271,0,0.790839983952838,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0.39736270956253,0,0,0,0.228620419965,0,0,0,0,0.226730383615211,0,0.358855426437903,0.335769232728157,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0,0.824140228955577,0,0.252697211763798,0,0.565879024158229,0.187283014939765,0.192075457214608,0.17230640686684,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,0,0,0.25384382367503,0,0.526139422875686,0,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0.695603506861264 | ||
|short_description=p2@ENSMUST00000125917 | |short_description=p2@ENSMUST00000125917 | ||
}} | }} |
Latest revision as of 20:03, 5 August 2015
Short description: | p2@ENSMUST00000125917 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000125917_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | -377bp_to_ENSMUST00000125917_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.09e-18 | 20 |
epithelial cell | 4.98e-18 | 25 |
intestinal epithelial cell | 3.51e-16 | 9 |
epithelial cell of alimentary canal | 3.51e-16 | 9 |
endo-epithelial cell | 7.20e-14 | 15 |
columnar/cuboidal epithelial cell | 1.32e-13 | 7 |
brush border epithelial cell | 1.80e-09 | 6 |
gut absorptive cell | 1.80e-09 | 6 |
enterocyte | 1.80e-09 | 6 |
intestinal crypt stem cell | 1.45e-08 | 3 |
regulatory T cell | 1.83e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.83e-07 | 1 |
lining cell | 2.11e-07 | 1 |
meso-epithelial cell | 2.11e-07 | 1 |
endothelial cell | 2.11e-07 | 1 |
endothelial cell of sinusoid | 2.11e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.11e-07 | 1 |
CD4-positive, alpha-beta T cell | 2.72e-07 | 8 |
neurecto-epithelial cell | 7.23e-07 | 1 |
ecto-epithelial cell | 7.23e-07 | 1 |
auditory epithelial support cell | 7.23e-07 | 1 |
supporting cell of cochlea | 7.23e-07 | 1 |
organ of Corti supporting cell | 7.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.23e-18 | 11 |
epithelium of mucosa | 3.51e-16 | 9 |
gastrointestinal system epithelium | 3.51e-16 | 9 |
intestinal epithelium | 3.51e-16 | 9 |
unilaminar epithelium | 1.64e-13 | 66 |
intestinal mucosa | 3.41e-11 | 13 |
wall of intestine | 3.41e-11 | 13 |
gastrointestinal system mucosa | 3.41e-11 | 13 |
mucosa | 1.08e-09 | 15 |
gut epithelium | 1.46e-09 | 55 |
bile duct | 2.11e-07 | 1 |
hepatic sinusoid | 2.11e-07 | 1 |
parenchyma | 2.11e-07 | 1 |
abdomen blood vessel | 2.11e-07 | 1 |
sinusoid | 2.11e-07 | 1 |
digestive system duct | 2.11e-07 | 1 |
abdominal segment blood vessel | 2.11e-07 | 1 |
trunk blood vessel | 2.11e-07 | 1 |
liver parenchyma | 2.11e-07 | 1 |
liver lobule | 2.11e-07 | 1 |
biliary system | 2.11e-07 | 1 |
biliary tree | 2.11e-07 | 1 |
biliary bud | 2.11e-07 | 1 |
hepatic duct | 2.11e-07 | 1 |
endo-epithelium | 2.29e-07 | 69 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.02e-08 | 3 |
muscle cancer | 1.02e-08 | 3 |