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FFCP PHASE1:Mm9::chr11:3548744..3548810,-: Difference between revisions

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{{FFCP|EntrezGene=544752|HGNC=|MCL_coexpression_id=1957|UniProt=|association_with_transcript=0bp_to_NR_002321,uc007htk.1_5end|description=CAGE_peak_1_at_Tug1_5end|id=chr11:3548744..3548810,-|ontology_enrichment_celltype=CL:0000117!8.25e-07!23;CL:0000337!8.25e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.08e-07,23;CL:0000337,8.08e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.12e-16!63;UBERON:0003056!4.67e-16!49;UBERON:0002346!6.15e-14!71;UBERON:0003075!6.15e-14!71;UBERON:0007284!6.15e-14!71;UBERON:0004121!1.43e-12!102;UBERON:0000924!1.43e-12!102;UBERON:0006601!1.43e-12!102;UBERON:0003080!8.71e-12!40;UBERON:0000955!1.01e-11!50;UBERON:0006238!1.01e-11!50;UBERON:0002780!1.74e-11!39;UBERON:0001890!1.74e-11!39;UBERON:0006240!1.74e-11!39;UBERON:0002616!2.29e-11!49;UBERON:0001049!3.58e-11!52;UBERON:0005068!3.58e-11!52;UBERON:0006241!3.58e-11!52;UBERON:0007135!3.58e-11!52;UBERON:0001017!4.39e-11!73;UBERON:0005743!4.39e-11!73;UBERON:0000073!4.47e-10!75;UBERON:0001016!4.47e-10!75;UBERON:0000153!6.47e-10!94;UBERON:0007811!1.29e-08!86;UBERON:0000468!1.44e-07!333;UBERON:0002020!4.89e-07!34;UBERON:0002791!7.06e-07!29;UBERON:0003528!7.06e-07!29;UBERON:0001893!7.06e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.41e-16,49;UBERON:0002346,1.58e-15,64;UBERON:0003075,1.58e-15,64;UBERON:0007284,1.58e-15,64;UBERON:0010371,3.90e-15,73;UBERON:0004121,1.71e-13,95;UBERON:0000924,1.71e-13,95;UBERON:0006601,1.71e-13,95;UBERON:0010314,3.97e-13,92;UBERON:0003080,8.37e-12,40;UBERON:0000073,1.38e-11,54;UBERON:0002780,1.67e-11,39;UBERON:0001890,1.67e-11,39;UBERON:0006240,1.67e-11,39;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0001049,3.44e-11,52;UBERON:0005068,3.44e-11,52;UBERON:0006241,3.44e-11,52;UBERON:0007135,3.44e-11,52;UBERON:0002616,4.05e-11,46;UBERON:0001017,4.23e-11,73;UBERON:0001016,4.71e-10,75;UBERON:0002020,4.78e-07,34;UBERON:0003528,6.91e-07,29;UBERON:0002791,6.91e-07,29;UBERON:0001893,6.91e-07,29|phase1_expression=7.04654927261093,0.697950815278722,0,3.0246421130683,2.50447864973174,1.34303417529512,1.63528848416868,0.774739940649458,0.422366166455,0.70219357896598,0.856089841127525,0.159544317990673,0.856003649656029,0.961624426608971,0.666219523631325,0.809901069559304,1.39912375625629,0.946386496074713,1.37114433605739,0,9.95006494767516,2.48227378002213,1.82839852397255,1.91990907352088,2.52350209173887,0,1.29228598847722,0.861884930743556,3.04037471130198,3.2763916868791,1.55211357458713,0,3.07532393792285,0,2.3108129580102,2.1610503896604,2.6542016314108,4.18531630736908,2.3440060335714,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,1.25896817975577,0.811015449756117,1.46837401729345,2.34717403304412,2.8343270329458,1.5378032791413,2.52758868796568,1.95980990275508,1.43752564364972,2.01339127269284,0.725362142011344,1.68046899571232,0.514518872071894,1.14613375975503,1.54701627683233,6.87875966922632,6.34789175126439,7.60597684207415,1.35537812827653,0.889294796111139,0.449949858640699,0,0.7104801149461,1.79760066311043,2.30530983192933,9.12468588314603,7.1553147315796,8.83364837675805,3.99911378165325,3.09215957332259,10.4117179332711,8.81778333367775,6.43453150627015,2.20231761998777,7.78892762319645,6.91229399653096,7.51751840062105,7.68496206260241,12.5019208933622,3.62937898701795,8.4414391504752,5.80633341551878,3.53554302568401,6.40672563595963,8.76077395378913,0.832988126665025,1.96486056277642,1.44932244350839,0,1.3599426674155,1.07940638327563,1.29955283489534,0.896053774194671,2.66844398250329,1.70430322578058,2.07828803682295,0,8.16891834704747,0,2.54805239706646,7.11066703153331,0.432982082022428,0.760079596425296,1.01104889002957,3.31133251185274,0.258937883647172,2.82040064223167,3.81667718885499,3.04465478312141,2.7673859670727,4.37095657602605,4.23319345688537,2.13633205260448,5.19109432242185,2.31358971071859,1.76922110389975,3.88240439873782,2.65009822152472,0.969750506270444,0,4.9772735491963,6.0739544975902,2.04365644166873,1.43778149407104,1.79970819298022,1.77898317902291,6.44099749440738,10.980014467647,13.0680526197379,7.12679712788333,7.41574826257959,8.3115217823824,7.13861557498134,9.47106083807942,3.23458123586242,4.54900965180614,3.36706969418358,11.4505989807179,8.27647575960503,8.64298223065676,9.79581315932148,11.2260223599691,12.0426897067759,10.1197862524507,9.31332134660456,7.54487975264948,10.0226222488944,9.85326295318113,5.2606975782618,6.11703948296315,4.87553033131033,4.7329891373827,6.56813080501028,1.40442637462647,1.28673953557358,2.55747149456033,4.34964122324554,6.3322036194896,5.76198596675248,3.78791576936336,4.32881309844288,7.0962871928194,5.8133486187602,5.36546802799238,4.32031766758527,4.11399624783701,3.61168420974009,3.16168357228837,4.23979963533464,2.41505126820156,2.28150911892632,4.6263788684108,9.46722433889417,3.63460661282178,1.85115396664481,7.89166526980366,6.73486348395272,3.35055399437443,3.63030344322017,2.00140239460383,2.09248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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:544752
|HGNC=
|MCL_coexpression_id=1957
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_NR_002321,uc007htk.1_5end
|cluster_id=chr11:3548744..3548810,-
|description=CAGE_peak_1_at_Tug1_5end
|id=chr11:3548744..3548810,-
|ontology_enrichment_celltype=CL:0000117!8.25e-07!23;CL:0000337!8.25e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,8.08e-07,23;CL:0000337,8.08e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.12e-16!63;UBERON:0003056!4.67e-16!49;UBERON:0002346!6.15e-14!71;UBERON:0003075!6.15e-14!71;UBERON:0007284!6.15e-14!71;UBERON:0004121!1.43e-12!102;UBERON:0000924!1.43e-12!102;UBERON:0006601!1.43e-12!102;UBERON:0003080!8.71e-12!40;UBERON:0000955!1.01e-11!50;UBERON:0006238!1.01e-11!50;UBERON:0002780!1.74e-11!39;UBERON:0001890!1.74e-11!39;UBERON:0006240!1.74e-11!39;UBERON:0002616!2.29e-11!49;UBERON:0001049!3.58e-11!52;UBERON:0005068!3.58e-11!52;UBERON:0006241!3.58e-11!52;UBERON:0007135!3.58e-11!52;UBERON:0001017!4.39e-11!73;UBERON:0005743!4.39e-11!73;UBERON:0000073!4.47e-10!75;UBERON:0001016!4.47e-10!75;UBERON:0000153!6.47e-10!94;UBERON:0007811!1.29e-08!86;UBERON:0000468!1.44e-07!333;UBERON:0002020!4.89e-07!34;UBERON:0002791!7.06e-07!29;UBERON:0003528!7.06e-07!29;UBERON:0001893!7.06e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.41e-16,49;UBERON:0002346,1.58e-15,64;UBERON:0003075,1.58e-15,64;UBERON:0007284,1.58e-15,64;UBERON:0010371,3.90e-15,73;UBERON:0004121,1.71e-13,95;UBERON:0000924,1.71e-13,95;UBERON:0006601,1.71e-13,95;UBERON:0010314,3.97e-13,92;UBERON:0003080,8.37e-12,40;UBERON:0000073,1.38e-11,54;UBERON:0002780,1.67e-11,39;UBERON:0001890,1.67e-11,39;UBERON:0006240,1.67e-11,39;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0001049,3.44e-11,52;UBERON:0005068,3.44e-11,52;UBERON:0006241,3.44e-11,52;UBERON:0007135,3.44e-11,52;UBERON:0002616,4.05e-11,46;UBERON:0001017,4.23e-11,73;UBERON:0001016,4.71e-10,75;UBERON:0002020,4.78e-07,34;UBERON:0003528,6.91e-07,29;UBERON:0002791,6.91e-07,29;UBERON:0001893,6.91e-07,29
|phase1_expression=7.04654927261093,0.697950815278722,0,3.0246421130683,2.50447864973174,1.34303417529512,1.63528848416868,0.774739940649458,0.422366166455,0.70219357896598,0.856089841127525,0.159544317990673,0.856003649656029,0.961624426608971,0.666219523631325,0.809901069559304,1.39912375625629,0.946386496074713,1.37114433605739,0,9.95006494767516,2.48227378002213,1.82839852397255,1.91990907352088,2.52350209173887,0,1.29228598847722,0.861884930743556,3.04037471130198,3.2763916868791,1.55211357458713,0,3.07532393792285,0,2.3108129580102,2.1610503896604,2.6542016314108,4.18531630736908,2.3440060335714,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,1.25896817975577,0.811015449756117,1.46837401729345,2.34717403304412,2.8343270329458,1.5378032791413,2.52758868796568,1.95980990275508,1.43752564364972,2.01339127269284,0.725362142011344,1.68046899571232,0.514518872071894,1.14613375975503,1.54701627683233,6.87875966922632,6.34789175126439,7.60597684207415,1.35537812827653,0.889294796111139,0.449949858640699,0,0.7104801149461,1.79760066311043,2.30530983192933,9.12468588314603,7.1553147315796,8.83364837675805,3.99911378165325,3.09215957332259,10.4117179332711,8.81778333367775,6.43453150627015,2.20231761998777,7.78892762319645,6.91229399653096,7.51751840062105,7.68496206260241,12.5019208933622,3.62937898701795,8.4414391504752,5.80633341551878,3.53554302568401,6.40672563595963,8.76077395378913,0.832988126665025,1.96486056277642,1.44932244350839,0,1.3599426674155,1.07940638327563,1.29955283489534,0.896053774194671,2.66844398250329,1.70430322578058,2.07828803682295,0,8.16891834704747,0,2.54805239706646,7.11066703153331,0.432982082022428,0.760079596425296,1.01104889002957,3.31133251185274,0.258937883647172,2.82040064223167,3.81667718885499,3.04465478312141,2.7673859670727,4.37095657602605,4.23319345688537,2.13633205260448,5.19109432242185,2.31358971071859,1.76922110389975,3.88240439873782,2.65009822152472,0.969750506270444,0,4.9772735491963,6.0739544975902,2.04365644166873,1.43778149407104,1.79970819298022,1.77898317902291,6.44099749440738,10.980014467647,13.0680526197379,7.12679712788333,7.41574826257959,8.3115217823824,7.13861557498134,9.47106083807942,3.23458123586242,4.54900965180614,3.36706969418358,11.4505989807179,8.27647575960503,8.64298223065676,9.79581315932148,11.2260223599691,12.0426897067759,10.1197862524507,9.31332134660456,7.54487975264948,10.0226222488944,9.85326295318113,5.2606975782618,6.11703948296315,4.87553033131033,4.7329891373827,6.56813080501028,1.40442637462647,1.28673953557358,2.55747149456033,4.34964122324554,6.3322036194896,5.76198596675248,3.78791576936336,4.32881309844288,7.0962871928194,5.8133486187602,5.36546802799238,4.32031766758527,4.11399624783701,3.61168420974009,3.16168357228837,4.23979963533464,2.41505126820156,2.28150911892632,4.6263788684108,9.46722433889417,3.63460661282178,1.85115396664481,7.89166526980366,6.73486348395272,3.35055399437443,3.63030344322017,2.00140239460383,2.09248188723815,1.42358718463353,4.44687177754829,5.27803938480566,4.57599885694647,4.28920991662064,2.69645822596266,2.37751854862164,3.58454291857861,2.84501851429623,6.96915926919346,2.25415471346161,6.31319116320474,6.0125271021964,7.64480436804472,8.47369597465048,5.01874503130647,7.84993639206874,7.52722699922983,0.592905254174298,0.83422552858047,1.76903095601883,3.14806957338795,2.63718157805054,1.4470629585145,1.52775511068852,2.30156909960649,1.45921704097532,1.37280706594041,2.87536413054709,1.86070473834252,3.74445207737473,1.01031551178845,0.717589654087649,0.964887042726734,2.21703828199926,9.85355341206521,6.19266910479698,4.75286240170527,5.86725620721255,4.52266895092903,4.04674189506223,5.07347484430277,4.25614889086716,4.4292937929755,4.78364305972461,2.78567635016755,2.41758974612254,3.61622646453779,3.01582567878545,0.54390568381871,1.96705709207614,3.58717770196152,5.13761887960934,3.39913891117389,2.95082901678016,2.01976741763498,5.04813151066011,4.29482618726302,4.73931475012158,4.30143836314594,4.23317480756549,3.39691836946599,4.04810701674894,3.79932615284705,3.55759000151871,7.06906896127976,2.83880170416537,6.23229612835393,9.44744364250741,2.96946221350564,1.32745138339963,7.28341908464944,3.62788268357701,4.71512699389745,4.13422650033082,4.91896236710284,6.46070732920553,6.5436071305951,6.77345018930971,4.74055136903724,5.27093042874994,1.03135543248187,12.9367050186439,10.8036656418786,6.85601024048599,10.7168517515796,9.22169214939823,9.0968096977056,10.3665882979336,6.39376393140658,0.469343416127421,1.48282449604674,1.7642271844397,2.80306630000516,6.29711264114032,3.61877549568935,4.17803204010978,3.28281799490123,1.1659233465194,3.8939313422207,0.683483523191411,7.22354037871279,3.33350149265481,3.01389531207506,1.36694227721025,1.37266903923914,2.71965487990169,3.91864066506242,4.00779924032829,0.954670618015114,9.64824780422463,2.84647253977588,5.07625101862466,5.85447228840512,4.36725127492355,5.52943820177765,5.20716771069616,4.71160695571253,2.46268449254406,3.72803587852155,31.0031116276305,6.87776111802302,5.79104716599842,6.80579159204167,5.94135187997563,8.27885014904813,5.8678619322877,4.6873578543822,2.72634295506848,24.8831644450786,23.3304305068871,2.21207784439725,5.6763060281246,4.62199307241723,4.15746633528944,2.32734704367726,3.17890167650024,2.40390899039938,2.21534290761866,3.02899349844443,3.96275394605999,3.02478555410522,2.53390489923356,1.34696578296461,3.62318396762864,3.62768613784338,0.221985953374065,0.269141569828427,0,3.47741269257943,1.50145980360946,2.56412273974171,3.00115730710692,5.01572104035363,2.82375921308533,4.60325236507177,5.15605962095457,5.32744865265431,6.16574267793578,3.0215755895588,4.05013500139084,4.05289082901798,7.25027854374727,7.7664046762773,11.0014588439227,8.37952234142165,8.70741389346084,2.18796045361465,4.82110274044359,6.61836630420051,3.55594764482584,4.12070114477788,3.20919209591815,5.05394423527595,5.83002389747551,4.71565853465191,3.93294331373506,3.77748399188729,4.19278923375977,5.23923060411381,4.51948871184936,4.24400285020151,2.06042950401653,3.97437084362873,7.20025430009372,4.43689515398344,4.29185141905178,2.47088908274958,6.21121910741182,2.79228206042532,7.3171189149109,6.31367307450823,4.48153575691344,3.92799590160417,3.79632057997357,3.74317033027141,5.32000356120596,5.11291575913688,4.05103883060397,5.74564329257276,5.84829021113521,5.15690529715916,3.44318997723918,4.19123696327079,3.70988536992674
|short_description=p1@Tug1
}}

Revision as of 20:54, 5 August 2015

Short description:p1@Tug1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tug1_5end
Coexpression cluster:MCL_coexpression_mm9:1957
Association with transcript: 0bp_to_NR_002321, uc007htk.1_5end
EntrezGene:544752
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Tug1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F113.07
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C611.45
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C611.23
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G810.12
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G19.47
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F86.97
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G77.64
kidney, neonate N10.CNhs11206.758-6D58.47
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F37.85
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G29.85
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H33.62
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G531.00
testis, embryo E13.CNhs11031.389-23F56.88
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I55.94
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H324.88
testis, neonate N30.CNhs11130.1391-42E223.33
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D33.96
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I811.00
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.08e-0723
neuroblast (sensu Vertebrata)8.08e-0723

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate4.41e-1649
neurectoderm1.58e-1564
neural plate1.58e-1564
presumptive neural plate1.58e-1564
ecto-epithelium3.90e-1573
ectoderm-derived structure1.71e-1395
ectoderm1.71e-1395
presumptive ectoderm1.71e-1395
structure with developmental contribution from neural crest3.97e-1392
anterior neural tube8.37e-1240
regional part of nervous system1.38e-1154
regional part of forebrain1.67e-1139
forebrain1.67e-1139
future forebrain1.67e-1139
brain1.78e-1147
future brain1.78e-1147
neural tube3.44e-1152
neural rod3.44e-1152
future spinal cord3.44e-1152
neural keel3.44e-1152
regional part of brain4.05e-1146
central nervous system4.23e-1173
nervous system4.71e-1075
gray matter4.78e-0734
brain grey matter6.91e-0729
regional part of telencephalon6.91e-0729
telencephalon6.91e-0729
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