FFCP PHASE1:Mm9::chr13:29042209..29042220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1337 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:29042209..29042220,- | |||
|description=CAGE_peak_at_chr13:29042209..29042220,- | |description=CAGE_peak_at_chr13:29042209..29042220,- | ||
|id=chr13:29042209..29042220,- | |id=chr13:29042209..29042220,- | ||
|ontology_enrichment_celltype=CL:0000393!5.64e-07!39;CL:0000211!5.64e-07!39 | |ontology_enrichment_celltype=CL:0000393!5.64e-07!39;CL:0000211!5.64e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.07e-16,6;CL:0000540,1.51e-14,33;CL:0000047,1.51e-14,33;CL:0000031,1.51e-14,33;CL:0000404,1.51e-14,33;CL:0000117,2.12e-14,23;CL:0000337,2.12e-14,23;CL:0000393,1.50e-13,39;CL:0000211,1.50e-13,39;CL:0000221,1.26e-11,44;CL:0000133,1.26e-11,44;CL:0002321,1.98e-10,70;CL:0002319,2.35e-10,43;CL:0002608,5.76e-09,3;CL:0000068,8.21e-09,3;CL:0002202,8.21e-09,3;CL:0000069,8.21e-09,3;CL:0002632,8.21e-09,3;CL:0002368,8.21e-09,3;CL:0000307,8.21e-09,3;CL:0000377,8.21e-09,3;CL:0002613,9.23e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,8.21e-09,3;UBERON:0001005,8.21e-09,3;UBERON:0007196,8.21e-09,3;UBERON:0001558,8.21e-09,3;UBERON:0000369,8.54e-09,5;UBERON:0002435,8.54e-09,5;UBERON:0000204,8.54e-09,5;UBERON:0010082,8.54e-09,5;UBERON:0003528,1.30e-07,29;UBERON:0002791,1.30e-07,29;UBERON:0001893,1.30e-07,29;UBERON:0002780,1.55e-07,39;UBERON:0001890,1.55e-07,39;UBERON:0006240,1.55e-07,39;UBERON:0001017,1.84e-07,73;UBERON:0002020,2.06e-07,34;UBERON:0003080,2.77e-07,40;UBERON:0001016,3.72e-07,75 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,1.46837401729345,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.514518872071894,0,0.515672092277442,1.21389876515759,2.11596391708813,0,0,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.384218305321555,4.56234294157302,4.72520784160917,3.57552434297349,0,0.441737081903227,2.08234358665422,2.49198224647415,2.75765635983006,0,0.127687338085188,0,2.37395317914349,1.55528994124096,2.08365348222704,0,0,0.15279824777681,0.294628585473668,0.427115042397309,1.1183966749518,0.681535739998656,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.259786004602869,1.06001872353102,1.54927761754349,0,0,0,3.46385665617943,1.77351905832569,2.02209778005913,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,1.50785222535437,0.173824320192276,0.255715457330331,0,0,0.407357455401265,0.248813941220186,0,0,0.520481771850815,0.919608417733892,0,0.753524089178575,0.884474488967262,0.896796041993948,1.49922759295566,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0,1.39323986772945,0,0.257347907114715,0.284163499395593,0.207125772535502,1.40715635988658,0.720248245844059,0.23674473558521,0.590292695242212,0,0.930135779001631,0.268273401399619,0.934122738937356,0.493679549740441,0.820837320395476,0.405344047729279,0,0.219550115291051,0.134206418760372,0,0.514523061896422,0.330418782983798,0,0.426576501070468,1.16118335930219,0.257734922644187,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.140271639780637,0.505892296994058,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.585400943573396,0.630540576424764,0.664394068946325,0.318909537314974,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,1.17131623288992,0.430846795465598,0.477937595905104,0.445597348164788,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,0,0.141940085208269,0.890328018336276,0.81443479676788,0.659880491890142,0,1.45668381692989,1.209294227859,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0.646793418913773,1.50035924522115,0.532020700926821,0.713475270408282,1.48094118541909,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0.358117032009409,0,0,0,0,0,0.555583582109135,0.188368457004691,0,0,0.679913719975421,0.279902904647316,0.829199842826543,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.777804753376191,0.516639293910924,0.844780627453891,0.58678619322877,1.3020438484395,0.629156066554265,0.241584120826006,0,0.632022241256357,0.608175645870493,1.1298205288131,0.649604114888975,0,0.198681354781265,0.360586348559907,1.03382669022204,0.403865799792591,0.838274873204998,0.504130925684203,1.16949456887703,0.769694733122636,1.05189211963412,0,0,0.179427713218951,0.167884616364078,0,0.375364950902364,0.915758121336325,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.14166082342594,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0,0.206035057238894,0,0,0.25347929989024,0,0.749132059759059,0.320125762024346,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.953744759789284,0.290692833264657,0.0941093804153306,0.423073039458382,0,0.263069711437843,0,0,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0,0.999242311751784,0.233931608445408,0,0.382576664137687,0,0 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,1.46837401729345,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.514518872071894,0,0.515672092277442,1.21389876515759,2.11596391708813,0,0,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.384218305321555,4.56234294157302,4.72520784160917,3.57552434297349,0,0.441737081903227,2.08234358665422,2.49198224647415,2.75765635983006,0,0.127687338085188,0,2.37395317914349,1.55528994124096,2.08365348222704,0,0,0.15279824777681,0.294628585473668,0.427115042397309,1.1183966749518,0.681535739998656,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0.259786004602869,1.06001872353102,1.54927761754349,0,0,0,3.46385665617943,1.77351905832569,2.02209778005913,0.22836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0,0,0.359445373517761,0,0.508280908292259,0,0,1.50785222535437,0.173824320192276,0.255715457330331,0,0,0.407357455401265,0.248813941220186,0,0,0.520481771850815,0.919608417733892,0,0.753524089178575,0.884474488967262,0.896796041993948,1.49922759295566,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0,1.39323986772945,0,0.257347907114715,0.284163499395593,0.207125772535502,1.40715635988658,0.720248245844059,0.23674473558521,0.590292695242212,0,0.930135779001631,0.268273401399619,0.934122738937356,0.493679549740441,0.820837320395476,0.405344047729279,0,0.219550115291051,0.134206418760372,0,0.514523061896422,0.330418782983798,0,0.426576501070468,1.16118335930219,0.257734922644187,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.140271639780637,0.505892296994058,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.585400943573396,0.630540576424764,0.664394068946325,0.318909537314974,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,0,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,1.17131623288992,0.430846795465598,0.477937595905104,0.445597348164788,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,0,0.141940085208269,0.890328018336276,0.81443479676788,0.659880491890142,0,1.45668381692989,1.209294227859,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0.646793418913773,1.50035924522115,0.532020700926821,0.713475270408282,1.48094118541909,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0.358117032009409,0,0,0,0,0,0.555583582109135,0.188368457004691,0,0,0.679913719975421,0.279902904647316,0.829199842826543,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.777804753376191,0.516639293910924,0.844780627453891,0.58678619322877,1.3020438484395,0.629156066554265,0.241584120826006,0,0.632022241256357,0.608175645870493,1.1298205288131,0.649604114888975,0,0.198681354781265,0.360586348559907,1.03382669022204,0.403865799792591,0.838274873204998,0.504130925684203,1.16949456887703,0.769694733122636,1.05189211963412,0,0,0.179427713218951,0.167884616364078,0,0.375364950902364,0.915758121336325,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0,0,0,0,1.14166082342594,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0,0.206035057238894,0,0,0.25347929989024,0,0.749132059759059,0.320125762024346,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.953744759789284,0.290692833264657,0.0941093804153306,0.423073039458382,0,0.263069711437843,0,0,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0,0.999242311751784,0.233931608445408,0,0.382576664137687,0,0 | ||
|short_description=p@chr13:29042209..29042220,- | |short_description=p@chr13:29042209..29042220,- | ||
}} | }} |
Latest revision as of 21:02, 5 August 2015
Short description: | p@chr13:29042209..29042220, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:29042209..29042220, - |
Coexpression cluster: | MCL_coexpression_mm9:1337 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.07e-16 | 6 |
neuron | 1.51e-14 | 33 |
neuronal stem cell | 1.51e-14 | 33 |
neuroblast | 1.51e-14 | 33 |
electrically signaling cell | 1.51e-14 | 33 |
CNS neuron (sensu Vertebrata) | 2.12e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-14 | 23 |
electrically responsive cell | 1.50e-13 | 39 |
electrically active cell | 1.50e-13 | 39 |
ectodermal cell | 1.26e-11 | 44 |
neurectodermal cell | 1.26e-11 | 44 |
embryonic cell | 1.98e-10 | 70 |
neural cell | 2.35e-10 | 43 |
hippocampal neuron | 5.76e-09 | 3 |
duct epithelial cell | 8.21e-09 | 3 |
epithelial cell of tracheobronchial tree | 8.21e-09 | 3 |
branched duct epithelial cell | 8.21e-09 | 3 |
epithelial cell of lower respiratory tract | 8.21e-09 | 3 |
respiratory epithelial cell | 8.21e-09 | 3 |
tracheal epithelial cell | 8.21e-09 | 3 |
tracheoblast | 8.21e-09 | 3 |
striatum neuron | 9.23e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 8.21e-09 | 3 |
respiratory airway | 8.21e-09 | 3 |
tracheobronchial tree | 8.21e-09 | 3 |
lower respiratory tract | 8.21e-09 | 3 |
corpus striatum | 8.54e-09 | 5 |
striatum | 8.54e-09 | 5 |
ventral part of telencephalon | 8.54e-09 | 5 |
future corpus striatum | 8.54e-09 | 5 |
brain grey matter | 1.30e-07 | 29 |
regional part of telencephalon | 1.30e-07 | 29 |
telencephalon | 1.30e-07 | 29 |
regional part of forebrain | 1.55e-07 | 39 |
forebrain | 1.55e-07 | 39 |
future forebrain | 1.55e-07 | 39 |
central nervous system | 1.84e-07 | 73 |
gray matter | 2.06e-07 | 34 |
anterior neural tube | 2.77e-07 | 40 |
nervous system | 3.72e-07 | 75 |