FFCP PHASE1:Mm9::chr15:9365840..9365858,+: Difference between revisions
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{{FFCP|EntrezGene=75568|HGNC=|UniProt=Q6P8Y1|association_with_transcript=57bp_to_ENSMUST00000042360,NM_029341,uc007vfn.1_5end|description=CAGE_peak_2_at_Capsl_5end|id=chr15:9365840..9365858,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.41e-07,3;CL:0002202,3.41e-07,3;CL:0000069,3.41e-07,3;CL:0002632,3.41e-07,3;CL:0002368,3.41e-07,3;CL:0000307,3.41e-07,3;CL:0000377,3.41e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.03e-09!17;UBERON:0005181!2.03e-09!17;UBERON:0002224!2.03e-09!17;UBERON:0000915!2.03e-09!17;UBERON:0008947!2.03e-09!17;UBERON:0003258!2.03e-09!17;UBERON:0005153!1.39e-07!17;UBERON:0002048!1.47e-07!14;UBERON:0000117!1.47e-07!14;UBERON:0000171!1.47e-07!14;UBERON:0000170!1.47e-07!14;UBERON:0005597!1.47e-07!14;UBERON:0000118!1.47e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.29e-20,17;UBERON:0005181,2.29e-20,17;UBERON:0002224,2.29e-20,17;UBERON:0000915,2.29e-20,17;UBERON:0008947,2.29e-20,17;UBERON:0003258,2.29e-20,17;UBERON:0002048,5.23e-15,14;UBERON:0000117,5.23e-15,14;UBERON:0000171,5.23e-15,14;UBERON:0000170,5.23e-15,14;UBERON:0005597,5.23e-15,14;UBERON:0000118,5.23e-15,14;UBERON:0005153,1.73e-14,17;UBERON:0005157,5.95e-12,20;UBERON:0003126,3.41e-07,3;UBERON:0001005,3.41e-07,3;UBERON:0007196,3.41e-07,3;UBERON:0001558,3.41e-07,3;UBERON:0000007,4.23e-07,8;UBERON:0003296,4.23e-07,8;UBERON:0010133,4.23e-07,8|phase1_expression=1.76163731815273,0,0,0.30246421130683,0,0.503637815735669,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,1.36069264241712,0,0,0,0.68822784320151,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.182975287204819,0,0,0,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0,0,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,0.704217098883403,0,0,0,2.16491041011214,2.53359865475099,1.01104889002957,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0.248813941220186,1.26361379216837,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.47202963994889,0.617427674275707,0.330418782983798,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,3.8798169934987,0,0.488894929326078,0.339490171550376,1.17345124144251,1.67506257441816,3.80869825417622,2.53673742215138,1.7339865851681,0.664394068946325,1.2756381492599,1.96635977658886,4.66249451037918,5.06271705035291,0,0,1.47529281905711,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,7.52282451603824,0.35613120733451,0.488660878060728,16.6619824202261,0,0.485561272309963,0.906970670894253,1.32023555829129,0,1.22974059177571,0.775284879504663,2.18120237686503,0.712994756769443,0,1.05418608574999,0,3.40439605753788,0.540183282093931,0.129358683782755,0.857348140126369,3.01478397191865,2.67553226403106,1.81003922662333,1.2178597964584,0.469343416127421,0,0.661585194164886,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,1.35982743995084,0.839708713941948,0.552799895217695,0.954670618015114,0.316335993581135,0.406638934253697,1.94409613479242,1.04544148007234,1.52853794622324,0.269728692769641,0.578574190077352,1.30877970992015,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0,0.724752362478018,0.288030006257865,0.316011120628178,0.405450430580328,0.616265742988964,0.389762468933385,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.403865799792591,0.304827226619999,0.504130925684203,0.38983152295901,0.577271049841977,0.350630706544707,0.680191150845634,0.443971906748129,0,0,0.965947970160952,0.750729901804728,4.94509385521616,3.85863082342319,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0,0.187283014939765,0.576226371643824,0.631790158511746,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.282328141245992,0.507687647350059,0.548783918618318,0,0.814824683075171,1.68342681497322,0,0.788035859004508,0.818462086339379,0.154936841185966,0.578719832943424,1.24905288968973,0.701794825336225,0.644613162144895,0,0.220591419119515,0.463735671240843|short_description=p2@Capsl}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75568 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6P8Y1 | |||
|association_with_transcript=57bp_to_ENSMUST00000042360,NM_029341,uc007vfn.1_5end | |||
|cluster_id=chr15:9365840..9365858,+ | |||
|description=CAGE_peak_2_at_Capsl_5end | |||
|id=chr15:9365840..9365858,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.41e-07,3;CL:0002202,3.41e-07,3;CL:0000069,3.41e-07,3;CL:0002632,3.41e-07,3;CL:0002368,3.41e-07,3;CL:0000307,3.41e-07,3;CL:0000377,3.41e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.03e-09!17;UBERON:0005181!2.03e-09!17;UBERON:0002224!2.03e-09!17;UBERON:0000915!2.03e-09!17;UBERON:0008947!2.03e-09!17;UBERON:0003258!2.03e-09!17;UBERON:0005153!1.39e-07!17;UBERON:0002048!1.47e-07!14;UBERON:0000117!1.47e-07!14;UBERON:0000171!1.47e-07!14;UBERON:0000170!1.47e-07!14;UBERON:0005597!1.47e-07!14;UBERON:0000118!1.47e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.29e-20,17;UBERON:0005181,2.29e-20,17;UBERON:0002224,2.29e-20,17;UBERON:0000915,2.29e-20,17;UBERON:0008947,2.29e-20,17;UBERON:0003258,2.29e-20,17;UBERON:0002048,5.23e-15,14;UBERON:0000117,5.23e-15,14;UBERON:0000171,5.23e-15,14;UBERON:0000170,5.23e-15,14;UBERON:0005597,5.23e-15,14;UBERON:0000118,5.23e-15,14;UBERON:0005153,1.73e-14,17;UBERON:0005157,5.95e-12,20;UBERON:0003126,3.41e-07,3;UBERON:0001005,3.41e-07,3;UBERON:0007196,3.41e-07,3;UBERON:0001558,3.41e-07,3;UBERON:0000007,4.23e-07,8;UBERON:0003296,4.23e-07,8;UBERON:0010133,4.23e-07,8 | |||
|phase1_expression=1.76163731815273,0,0,0.30246421130683,0,0.503637815735669,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,1.36069264241712,0,0,0,0.68822784320151,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.182975287204819,0,0,0,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0,0,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,0.704217098883403,0,0,0,2.16491041011214,2.53359865475099,1.01104889002957,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0.248813941220186,1.26361379216837,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.47202963994889,0.617427674275707,0.330418782983798,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,3.8798169934987,0,0.488894929326078,0.339490171550376,1.17345124144251,1.67506257441816,3.80869825417622,2.53673742215138,1.7339865851681,0.664394068946325,1.2756381492599,1.96635977658886,4.66249451037918,5.06271705035291,0,0,1.47529281905711,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,7.52282451603824,0.35613120733451,0.488660878060728,16.6619824202261,0,0.485561272309963,0.906970670894253,1.32023555829129,0,1.22974059177571,0.775284879504663,2.18120237686503,0.712994756769443,0,1.05418608574999,0,3.40439605753788,0.540183282093931,0.129358683782755,0.857348140126369,3.01478397191865,2.67553226403106,1.81003922662333,1.2178597964584,0.469343416127421,0,0.661585194164886,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,1.35982743995084,0.839708713941948,0.552799895217695,0.954670618015114,0.316335993581135,0.406638934253697,1.94409613479242,1.04544148007234,1.52853794622324,0.269728692769641,0.578574190077352,1.30877970992015,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0,0.724752362478018,0.288030006257865,0.316011120628178,0.405450430580328,0.616265742988964,0.389762468933385,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.403865799792591,0.304827226619999,0.504130925684203,0.38983152295901,0.577271049841977,0.350630706544707,0.680191150845634,0.443971906748129,0,0,0.965947970160952,0.750729901804728,4.94509385521616,3.85863082342319,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0,0.187283014939765,0.576226371643824,0.631790158511746,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.282328141245992,0.507687647350059,0.548783918618318,0,0.814824683075171,1.68342681497322,0,0.788035859004508,0.818462086339379,0.154936841185966,0.578719832943424,1.24905288968973,0.701794825336225,0.644613162144895,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Capsl | |||
}} |
Revision as of 21:15, 5 August 2015
Short description: | p2@Capsl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Capsl_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENSMUST00000042360, NM_029341, uc007vfn.1_5end |
EntrezGene: | 75568 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.41e-07 | 3 |
epithelial cell of tracheobronchial tree | 3.41e-07 | 3 |
branched duct epithelial cell | 3.41e-07 | 3 |
epithelial cell of lower respiratory tract | 3.41e-07 | 3 |
respiratory epithelial cell | 3.41e-07 | 3 |
tracheal epithelial cell | 3.41e-07 | 3 |
tracheoblast | 3.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.29e-20 | 17 |
thoracic segment organ | 2.29e-20 | 17 |
thoracic cavity | 2.29e-20 | 17 |
thoracic segment of trunk | 2.29e-20 | 17 |
respiratory primordium | 2.29e-20 | 17 |
endoderm of foregut | 2.29e-20 | 17 |
lung | 5.23e-15 | 14 |
respiratory tube | 5.23e-15 | 14 |
respiration organ | 5.23e-15 | 14 |
pair of lungs | 5.23e-15 | 14 |
lung primordium | 5.23e-15 | 14 |
lung bud | 5.23e-15 | 14 |
epithelial bud | 1.73e-14 | 17 |
epithelial fold | 5.95e-12 | 20 |
trachea | 3.41e-07 | 3 |
respiratory airway | 3.41e-07 | 3 |
tracheobronchial tree | 3.41e-07 | 3 |
lower respiratory tract | 3.41e-07 | 3 |
pituitary gland | 4.23e-07 | 8 |
gland of diencephalon | 4.23e-07 | 8 |
neuroendocrine gland | 4.23e-07 | 8 |