FFCP PHASE1:Mm9::chr3:109948434..109948438,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=141|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:109948434..109948438,+|id=chr3:109948434..109948438,+|ontology_enrichment_celltype=CL:0000117!6.98e-18!23;CL:0000337!6.98e-18!23;CL:0000540!8.89e-15!33;CL:0000047!8.89e-15!33;CL:0000031!8.89e-15!33;CL:0000404!8.89e-15!33;CL:0000221!8.99e-13!44;CL:0000133!8.99e-13!44;CL:0000393!9.37e-12!39;CL:0000211!9.37e-12!39;CL:0002319!1.04e-11!43;CL:0000055!2.28e-09!50;CL:0002613!2.52e-07!3|ontology_enrichment_celltype_v019_2=CL:0002613,1.70e-39,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.24e-10!73;UBERON:0005743!2.24e-10!73;UBERON:0004121!3.27e-10!102;UBERON:0000924!3.27e-10!102;UBERON:0006601!3.27e-10!102;UBERON:0002346!4.46e-10!71;UBERON:0003075!4.46e-10!71;UBERON:0007284!4.46e-10!71;UBERON:0000073!6.34e-10!75;UBERON:0001016!6.34e-10!75;UBERON:0001948!1.12e-09!5;UBERON:0002315!1.12e-09!5;UBERON:0001049!1.58e-08!52;UBERON:0005068!1.58e-08!52;UBERON:0006241!1.58e-08!52;UBERON:0007135!1.58e-08!52;UBERON:0002240!5.63e-08!6;UBERON:0005174!5.63e-08!6;UBERON:0001137!5.63e-08!6;UBERON:0003076!3.72e-07!12;UBERON:0003057!3.72e-07!12;UBERON:0000033!6.78e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.98e-24,5;UBERON:0002435,2.98e-24,5;UBERON:0000204,2.98e-24,5;UBERON:0010082,2.98e-24,5;UBERON:0002420,1.23e-15,8;UBERON:0007245,1.23e-15,8;UBERON:0010009,1.23e-15,8;UBERON:0010011,1.23e-15,8;UBERON:0000454,1.23e-15,8;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.510749352340751,0.768032666281217,0.791317726381163,2.10421580285542,1.04182674111352,0.279182999001381,0,0.15279824777681,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,1.0389402227978,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0,0,0,0,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr3:109948434..109948438,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:109948434..109948438,+ | |||
|description=CAGE_peak_at_chr3:109948434..109948438,+ | |||
|id=chr3:109948434..109948438,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.98e-18!23;CL:0000337!6.98e-18!23;CL:0000540!8.89e-15!33;CL:0000047!8.89e-15!33;CL:0000031!8.89e-15!33;CL:0000404!8.89e-15!33;CL:0000221!8.99e-13!44;CL:0000133!8.99e-13!44;CL:0000393!9.37e-12!39;CL:0000211!9.37e-12!39;CL:0002319!1.04e-11!43;CL:0000055!2.28e-09!50;CL:0002613!2.52e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.70e-39,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.24e-10!73;UBERON:0005743!2.24e-10!73;UBERON:0004121!3.27e-10!102;UBERON:0000924!3.27e-10!102;UBERON:0006601!3.27e-10!102;UBERON:0002346!4.46e-10!71;UBERON:0003075!4.46e-10!71;UBERON:0007284!4.46e-10!71;UBERON:0000073!6.34e-10!75;UBERON:0001016!6.34e-10!75;UBERON:0001948!1.12e-09!5;UBERON:0002315!1.12e-09!5;UBERON:0001049!1.58e-08!52;UBERON:0005068!1.58e-08!52;UBERON:0006241!1.58e-08!52;UBERON:0007135!1.58e-08!52;UBERON:0002240!5.63e-08!6;UBERON:0005174!5.63e-08!6;UBERON:0001137!5.63e-08!6;UBERON:0003076!3.72e-07!12;UBERON:0003057!3.72e-07!12;UBERON:0000033!6.78e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.98e-24,5;UBERON:0002435,2.98e-24,5;UBERON:0000204,2.98e-24,5;UBERON:0010082,2.98e-24,5;UBERON:0002420,1.23e-15,8;UBERON:0007245,1.23e-15,8;UBERON:0010009,1.23e-15,8;UBERON:0010011,1.23e-15,8;UBERON:0000454,1.23e-15,8;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.510749352340751,0.768032666281217,0.791317726381163,2.10421580285542,1.04182674111352,0.279182999001381,0,0.15279824777681,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,1.0389402227978,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0.315508219416257,0,0,0,0,0,0.809621403349789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr3:109948434..109948438,+ | |||
}} |
Latest revision as of 21:31, 5 August 2015
Short description: | p@chr3:109948434..109948438, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:109948434..109948438, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.70e-39 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.98e-24 | 5 |
striatum | 2.98e-24 | 5 |
ventral part of telencephalon | 2.98e-24 | 5 |
future corpus striatum | 2.98e-24 | 5 |
basal ganglion | 1.23e-15 | 8 |
nuclear complex of neuraxis | 1.23e-15 | 8 |
aggregate regional part of brain | 1.23e-15 | 8 |
collection of basal ganglia | 1.23e-15 | 8 |
cerebral subcortex | 1.23e-15 | 8 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |