FFCP PHASE1:Mm9::chr15:99288189..99288208,-: Difference between revisions
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{{FFCP|EntrezGene=380969|HGNC=|MCL_coexpression_id=398|UniProt=Q6GQX2|association_with_transcript=-10bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end|description=CAGE_peak_2_at_Nckap5l_5end|id=chr15:99288189..99288208,-|ontology_enrichment_celltype=CL:0000117!1.19e-07!23;CL:0000337!1.19e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-07,23;CL:0000337,1.24e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.28e-18!52;UBERON:0005068!2.28e-18!52;UBERON:0006241!2.28e-18!52;UBERON:0007135!2.28e-18!52;UBERON:0002346!2.61e-18!71;UBERON:0003075!2.61e-18!71;UBERON:0007284!2.61e-18!71;UBERON:0001017!9.51e-18!73;UBERON:0005743!9.51e-18!73;UBERON:0000073!4.68e-17!75;UBERON:0001016!4.68e-17!75;UBERON:0004121!1.04e-16!102;UBERON:0000924!1.04e-16!102;UBERON:0006601!1.04e-16!102;UBERON:0000955!5.62e-15!50;UBERON:0006238!5.62e-15!50;UBERON:0002616!5.79e-15!49;UBERON:0000033!3.00e-14!63;UBERON:0000153!4.91e-14!94;UBERON:0003056!5.30e-14!49;UBERON:0003080!4.96e-13!40;UBERON:0007811!5.89e-13!86;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002020!2.14e-12!34;UBERON:0002791!4.99e-10!29;UBERON:0003528!4.99e-10!29;UBERON:0001893!4.99e-10!29;UBERON:0000025!1.84e-09!114;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0004111!2.36e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.91e-18,52;UBERON:0005068,1.91e-18,52;UBERON:0006241,1.91e-18,52;UBERON:0007135,1.91e-18,52;UBERON:0002346,6.87e-18,64;UBERON:0003075,6.87e-18,64;UBERON:0007284,6.87e-18,64;UBERON:0000073,1.55e-17,54;UBERON:0001017,4.37e-17,73;UBERON:0001016,3.14e-16,75;UBERON:0010371,4.42e-16,73;UBERON:0010314,1.80e-15,92;UBERON:0004121,2.68e-15,95;UBERON:0000924,2.68e-15,95;UBERON:0006601,2.68e-15,95;UBERON:0000955,4.10e-15,47;UBERON:0006238,4.10e-15,47;UBERON:0002616,4.19e-15,46;UBERON:0003056,5.18e-14,49;UBERON:0003080,4.10e-13,40;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0002020,2.12e-12,34;UBERON:0003528,6.74e-10,29;UBERON:0002791,6.74e-10,29;UBERON:0001893,6.74e-10,29;UBERON:0000025,3.72e-09,114;UBERON:0000956,3.12e-08,21;UBERON:0001869,3.12e-08,21;UBERON:0000203,3.12e-08,21;UBERON:0004111,2.72e-07,122|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.93684985162364,0.281577444303333,1.17032263160997,1.71217968225505,1.11681022593471,1.88320802924326,2.09808965805594,0.333109761815663,0,0.699561878128147,1.10411757875383,0.685572168028694,0,1.27564935226605,1.29078236561151,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0.881277725829041,1.31790010585369,1.28482726513177,3.12956537739216,0.872100625521786,1.31811709640683,0.777719596297134,0.55994568650145,1.43752564364972,0.167782606057736,1.45072428402269,2.01656279485478,0.514518872071894,1.43266719969378,0,5.66486090406874,6.34789175126439,2.53532561402472,1.0165335962074,0,1.3498495759221,0,0.7104801149461,1.19840044207362,4.2264013585371,4.14758449233911,3.64516033495565,4.41682418837902,1.99955689082663,2.87129103237098,3.55223317723367,3.45043695665651,0.919218786610021,1.10115880999389,2.29837208553338,1.22885226604995,4.61602007055678,6.49562269577109,7.29278718779464,1.3959149950069,0.56276261003168,1.06958773443767,4.12480019663135,3.70166370077668,4.84638559145781,0.681535739998656,1.13357340160178,2.02905142091174,0,0,0,0,0,0.140444420131752,0.681721290312231,0,1.06001872353102,1.54927761754349,0,0,0,0,0,0,0.11418387971906,0.517875767294343,1.7813056687779,0.867426633830679,2.13125834818499,1.38369298353635,1.3565037649736,1.88141931417128,1.38233250462643,1.23597483867187,0.433798070759735,0.884610551949874,1.7794353494215,1.10420759230197,1.93950101254089,0,3.80615036115011,3.77004072264219,0.510914110417183,0.11981512450592,0,0.508280908292259,3.14560342750128,2.74500361691176,5.02617408451458,2.78118912307642,2.30143911597297,2.70124457927428,3.89379031362618,2.03678727700633,0.870848794270651,0.505445516867349,0.631325567659422,1.56144531555244,2.06911893990126,1.62055916824814,1.9591626318643,2.04109497453984,2.0498195245576,1.96773621575431,2.58703370739016,1.94011193639558,2.64748512234947,2.63926686245923,1.7535658594206,1.66828349535359,2.78601733217733,1.02891068203972,1.79130840136644,0,0.51469581422943,0.568326998791185,1.65700618028402,1.40715635988658,0.720248245844059,2.13070262026689,2.36117078096885,2.00547246753592,1.86027155800326,3.48755421819505,1.63471479314037,1.31647879930784,1.14917224855367,0.972825714550269,1.46199987425332,0.878200461164203,1.61047702512446,2.94405927989778,4.93942139420565,0,0,2.34617075588757,2.32236671860439,1.80414445850931,1.21010114774006,0.22237804384487,0.190225626112559,0.949058123089023,0.988193728344065,0.251335208800269,0.994782360205754,0.58489226135736,0.898819408654221,0.864552199498777,0.398282546508734,3.41402221715547,1.25673363870702,4.5083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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380969 | |||
|HGNC= | |||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6GQX2 | |||
|association_with_transcript=-10bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end | |||
|cluster_id=chr15:99288189..99288208,- | |||
|description=CAGE_peak_2_at_Nckap5l_5end | |||
|id=chr15:99288189..99288208,- | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-07!23;CL:0000337!1.19e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-07,23;CL:0000337,1.24e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.28e-18!52;UBERON:0005068!2.28e-18!52;UBERON:0006241!2.28e-18!52;UBERON:0007135!2.28e-18!52;UBERON:0002346!2.61e-18!71;UBERON:0003075!2.61e-18!71;UBERON:0007284!2.61e-18!71;UBERON:0001017!9.51e-18!73;UBERON:0005743!9.51e-18!73;UBERON:0000073!4.68e-17!75;UBERON:0001016!4.68e-17!75;UBERON:0004121!1.04e-16!102;UBERON:0000924!1.04e-16!102;UBERON:0006601!1.04e-16!102;UBERON:0000955!5.62e-15!50;UBERON:0006238!5.62e-15!50;UBERON:0002616!5.79e-15!49;UBERON:0000033!3.00e-14!63;UBERON:0000153!4.91e-14!94;UBERON:0003056!5.30e-14!49;UBERON:0003080!4.96e-13!40;UBERON:0007811!5.89e-13!86;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002020!2.14e-12!34;UBERON:0002791!4.99e-10!29;UBERON:0003528!4.99e-10!29;UBERON:0001893!4.99e-10!29;UBERON:0000025!1.84e-09!114;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0004111!2.36e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.91e-18,52;UBERON:0005068,1.91e-18,52;UBERON:0006241,1.91e-18,52;UBERON:0007135,1.91e-18,52;UBERON:0002346,6.87e-18,64;UBERON:0003075,6.87e-18,64;UBERON:0007284,6.87e-18,64;UBERON:0000073,1.55e-17,54;UBERON:0001017,4.37e-17,73;UBERON:0001016,3.14e-16,75;UBERON:0010371,4.42e-16,73;UBERON:0010314,1.80e-15,92;UBERON:0004121,2.68e-15,95;UBERON:0000924,2.68e-15,95;UBERON:0006601,2.68e-15,95;UBERON:0000955,4.10e-15,47;UBERON:0006238,4.10e-15,47;UBERON:0002616,4.19e-15,46;UBERON:0003056,5.18e-14,49;UBERON:0003080,4.10e-13,40;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0002020,2.12e-12,34;UBERON:0003528,6.74e-10,29;UBERON:0002791,6.74e-10,29;UBERON:0001893,6.74e-10,29;UBERON:0000025,3.72e-09,114;UBERON:0000956,3.12e-08,21;UBERON:0001869,3.12e-08,21;UBERON:0000203,3.12e-08,21;UBERON:0004111,2.72e-07,122 | |||
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| |||
|short_description=p2@Nckap5l | |||
}} |
Revision as of 00:04, 6 August 2015
Short description: | p2@Nckap5l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nckap5l_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | -10bp_to_ENSMUST00000023747, NM_001001884, uc007xpn.1_5end |
EntrezGene: | 380969 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.91e-18 | 52 |
neural rod | 1.91e-18 | 52 |
future spinal cord | 1.91e-18 | 52 |
neural keel | 1.91e-18 | 52 |
neurectoderm | 6.87e-18 | 64 |
neural plate | 6.87e-18 | 64 |
presumptive neural plate | 6.87e-18 | 64 |
regional part of nervous system | 1.55e-17 | 54 |
central nervous system | 4.37e-17 | 73 |
nervous system | 3.14e-16 | 75 |
ecto-epithelium | 4.42e-16 | 73 |
structure with developmental contribution from neural crest | 1.80e-15 | 92 |
ectoderm-derived structure | 2.68e-15 | 95 |
ectoderm | 2.68e-15 | 95 |
presumptive ectoderm | 2.68e-15 | 95 |
brain | 4.10e-15 | 47 |
future brain | 4.10e-15 | 47 |
regional part of brain | 4.19e-15 | 46 |
pre-chordal neural plate | 5.18e-14 | 49 |
anterior neural tube | 4.10e-13 | 40 |
regional part of forebrain | 1.28e-12 | 39 |
forebrain | 1.28e-12 | 39 |
future forebrain | 1.28e-12 | 39 |
gray matter | 2.12e-12 | 34 |
brain grey matter | 6.74e-10 | 29 |
regional part of telencephalon | 6.74e-10 | 29 |
telencephalon | 6.74e-10 | 29 |
tube | 3.72e-09 | 114 |
cerebral cortex | 3.12e-08 | 21 |
cerebral hemisphere | 3.12e-08 | 21 |
pallium | 3.12e-08 | 21 |
anatomical conduit | 2.72e-07 | 122 |