FFCP PHASE1:Mm9::chr18:65961097..65961123,+: Difference between revisions
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{{FFCP|EntrezGene=66286|HGNC=|MCL_coexpression_id=522|UniProt=|association_with_transcript=141bp_to_ENSMUST00000155668_5end|description=CAGE_peak_3_at_Sec11c_5end|id=chr18:65961097..65961123,+|ontology_enrichment_celltype=CL:0000988!5.12e-07!32;CL:0002032!5.12e-07!32;CL:0000037!5.12e-07!32;CL:0000566!5.12e-07!32;CL:0000837!5.12e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.04e-08,32;CL:0002032,1.04e-08,32;CL:0000037,1.04e-08,32;CL:0000837,1.04e-08,32;CL:0000049,9.32e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.47e-11!128;UBERON:0001555!3.47e-11!128;UBERON:0007026!3.47e-11!128;UBERON:0004119!9.00e-11!130;UBERON:0000925!9.00e-11!130;UBERON:0006595!9.00e-11!130;UBERON:0002193!1.65e-10!48;UBERON:0004921!2.32e-10!126;UBERON:0004185!2.32e-10!126;UBERON:0002390!3.56e-09!45;UBERON:0003061!3.56e-09!45;UBERON:0001041!3.52e-08!92;UBERON:0000077!4.05e-08!97;UBERON:0002405!4.20e-08!70;UBERON:0004177!5.55e-07!29;UBERON:0005409!8.57e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.37e-14,48;UBERON:0002405,5.37e-14,48;UBERON:0002390,5.43e-12,45;UBERON:0003061,5.43e-12,45;UBERON:0004177,1.00e-08,29;UBERON:0005057,1.00e-08,29;UBERON:0000072,1.37e-07,27;UBERON:0003408,2.13e-07,24;UBERON:0000077,4.00e-07,35;UBERON:0002370,8.79e-07,23;UBERON:0000974,8.79e-07,23;UBERON:0004807,8.79e-07,23;UBERON:0005058,8.79e-07,23;UBERON:0003351,8.79e-07,23;UBERON:0009113,8.79e-07,23;UBERON:0003295,8.79e-07,23;UBERON:0009722,8.79e-07,23;UBERON:0005562,8.79e-07,23;UBERON:0007690,8.79e-07,23|phase1_expression=0.160148847104794,0.697950815278722,1.36499771816861,0,0,3.69334398206158,5.60670337429262,2.58246646883153,0.140788722151667,0.234064526321993,1.88339765048055,0.957265907944037,1.36960583944965,0.611942816932982,2.99798785634096,6.2767332890846,5.59649502502517,8.3597473819933,7.40417941470989,11.0341309467488,0.425216450755349,8.93618560807968,7.05239430675126,4.63978026100879,5.73523202667925,0,0,3.878482188346,3.23039813075836,2.52030129759931,9.97787297948871,1.27006134691926,0,0,9.24325183204079,5.98444723290572,8.16677425049476,15.4856703372656,15.626706890476,18.3233310390829,11.7646297606203,9.56263678941824,16.5073520030592,0,0,0,0,0,0,0,0.139986421625363,0,6.71130424230945,0.725362142011344,3.36093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,2.19605960666234,2.87171928405785,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,1.08245520505607,2.02687892380079,3.0331466700887,0.68510327831436,3.6251303710604,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0.323533699894818,1.54589062922275,0.969750506270444,0,0.585561594023094,0,2.55457055208591,14.2579998162045,24.5960119707297,16.5191295194984,0.748953197024114,0.915001205637253,0,0.347648640384553,0.255715457330331,1.0389402227978,0.162241263067758,0.203678727700633,1.8661045591514,0.252722758433675,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,14.7464769335779,18.7863972193742,9.37739548005456,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0.660837565967596,1.58670339998127,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0.58489226135736,1.79763881730844,0.216138049874694,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,1.66845105716094,1.37591296579242,1.12431056192427,0.811440485554012,0.72353147925725,0.50925170356284,1.43848068725405,1.29708181420028,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0.704070744865506,0.335012514883631,0.476087281772027,0,0.157635144106191,0.44292937929755,0.159454768657487,0.81931657357869,0.345369963731791,0.578596234326046,0,0,7.86822836830458,2.48343071674259,1.28440471990234,0.703270119553219,0,0,0.631016438832513,0.780877488593277,1.07711698866399,0,0.445597348164788,0.566153061577665,0.809621403349789,0.876767573733936,0,0.321321316421807,0.283880170416537,0,0.651547837414304,0.824850614862677,2.65490276679926,0.242780636154981,0,1.50884063804718,1.18120757152309,1.53717573971964,1.03371317267288,2.54473610634254,3.20847640546249,4.10847785316561,5.27093042874994,9.28219889233682,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,3.74898276693435,0.16488625294148,0,0.180938774784468,0.119372344003136,0.164140899745061,0,2.03967832211561,3.2465467351592,0.412773735926445,2.40752885580625,2.44878994106098,2.05041341581538,2.28778173206523,8.83887835968048,11.056164733569,7.18639863783004,4.77335309007557,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0.655087691238533,0.944050424693745,0.495920734352016,1.04702376793612,1.55537967950151,4.34937519160848,0,0,0,0,0,0,0,0.13020438484395,0,0,0,5.68820017130721,1.01362607645082,1.84879722896689,3.50786222040047,4.29664069601955,3.77494574084403,3.4856680360791,3.69223817936443,6.05798699688886,5.48689007915999,4.7388307014315,4.48306251402861,4.2333210321745,5.72696820689688,0,0,0,0,0.386379188064381,1.12609485270709,2.38097111547445,0.214368379079066,13.5424468089548,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0,0,0.376437521661322,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.309873682371932,0.578719832943424,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.927471342481686|short_description=p3@Sec11c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66286 | |||
|HGNC= | |||
|MCL_coexpression_id=522 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=141bp_to_ENSMUST00000155668_5end | |||
|cluster_id=chr18:65961097..65961123,+ | |||
|description=CAGE_peak_3_at_Sec11c_5end | |||
|id=chr18:65961097..65961123,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.12e-07!32;CL:0002032!5.12e-07!32;CL:0000037!5.12e-07!32;CL:0000566!5.12e-07!32;CL:0000837!5.12e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.04e-08,32;CL:0002032,1.04e-08,32;CL:0000037,1.04e-08,32;CL:0000837,1.04e-08,32;CL:0000049,9.32e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.47e-11!128;UBERON:0001555!3.47e-11!128;UBERON:0007026!3.47e-11!128;UBERON:0004119!9.00e-11!130;UBERON:0000925!9.00e-11!130;UBERON:0006595!9.00e-11!130;UBERON:0002193!1.65e-10!48;UBERON:0004921!2.32e-10!126;UBERON:0004185!2.32e-10!126;UBERON:0002390!3.56e-09!45;UBERON:0003061!3.56e-09!45;UBERON:0001041!3.52e-08!92;UBERON:0000077!4.05e-08!97;UBERON:0002405!4.20e-08!70;UBERON:0004177!5.55e-07!29;UBERON:0005409!8.57e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.37e-14,48;UBERON:0002405,5.37e-14,48;UBERON:0002390,5.43e-12,45;UBERON:0003061,5.43e-12,45;UBERON:0004177,1.00e-08,29;UBERON:0005057,1.00e-08,29;UBERON:0000072,1.37e-07,27;UBERON:0003408,2.13e-07,24;UBERON:0000077,4.00e-07,35;UBERON:0002370,8.79e-07,23;UBERON:0000974,8.79e-07,23;UBERON:0004807,8.79e-07,23;UBERON:0005058,8.79e-07,23;UBERON:0003351,8.79e-07,23;UBERON:0009113,8.79e-07,23;UBERON:0003295,8.79e-07,23;UBERON:0009722,8.79e-07,23;UBERON:0005562,8.79e-07,23;UBERON:0007690,8.79e-07,23 | |||
|phase1_expression=0.160148847104794,0.697950815278722,1.36499771816861,0,0,3.69334398206158,5.60670337429262,2.58246646883153,0.140788722151667,0.234064526321993,1.88339765048055,0.957265907944037,1.36960583944965,0.611942816932982,2.99798785634096,6.2767332890846,5.59649502502517,8.3597473819933,7.40417941470989,11.0341309467488,0.425216450755349,8.93618560807968,7.05239430675126,4.63978026100879,5.73523202667925,0,0,3.878482188346,3.23039813075836,2.52030129759931,9.97787297948871,1.27006134691926,0,0,9.24325183204079,5.98444723290572,8.16677425049476,15.4856703372656,15.626706890476,18.3233310390829,11.7646297606203,9.56263678941824,16.5073520030592,0,0,0,0,0,0,0,0.139986421625363,0,6.71130424230945,0.725362142011344,3.36093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,2.19605960666234,2.87171928405785,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,1.08245520505607,2.02687892380079,3.0331466700887,0.68510327831436,3.6251303710604,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0,0.144599356919912,0.884610551949874,0.323533699894818,1.54589062922275,0.969750506270444,0,0.585561594023094,0,2.55457055208591,14.2579998162045,24.5960119707297,16.5191295194984,0.748953197024114,0.915001205637253,0,0.347648640384553,0.255715457330331,1.0389402227978,0.162241263067758,0.203678727700633,1.8661045591514,0.252722758433675,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,14.7464769335779,18.7863972193742,9.37739548005456,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0.660837565967596,1.58670339998127,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0.58489226135736,1.79763881730844,0.216138049874694,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,1.66845105716094,1.37591296579242,1.12431056192427,0.811440485554012,0.72353147925725,0.50925170356284,1.43848068725405,1.29708181420028,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0.704070744865506,0.335012514883631,0.476087281772027,0,0.157635144106191,0.44292937929755,0.159454768657487,0.81931657357869,0.345369963731791,0.578596234326046,0,0,7.86822836830458,2.48343071674259,1.28440471990234,0.703270119553219,0,0,0.631016438832513,0.780877488593277,1.07711698866399,0,0.445597348164788,0.566153061577665,0.809621403349789,0.876767573733936,0,0.321321316421807,0.283880170416537,0,0.651547837414304,0.824850614862677,2.65490276679926,0.242780636154981,0,1.50884063804718,1.18120757152309,1.53717573971964,1.03371317267288,2.54473610634254,3.20847640546249,4.10847785316561,5.27093042874994,9.28219889233682,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0.21183207086382,3.74898276693435,0.16488625294148,0,0.180938774784468,0.119372344003136,0.164140899745061,0,2.03967832211561,3.2465467351592,0.412773735926445,2.40752885580625,2.44878994106098,2.05041341581538,2.28778173206523,8.83887835968048,11.056164733569,7.18639863783004,4.77335309007557,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0.655087691238533,0.944050424693745,0.495920734352016,1.04702376793612,1.55537967950151,4.34937519160848,0,0,0,0,0,0,0,0.13020438484395,0,0,0,5.68820017130721,1.01362607645082,1.84879722896689,3.50786222040047,4.29664069601955,3.77494574084403,3.4856680360791,3.69223817936443,6.05798699688886,5.48689007915999,4.7388307014315,4.48306251402861,4.2333210321745,5.72696820689688,0,0,0,0,0.386379188064381,1.12609485270709,2.38097111547445,0.214368379079066,13.5424468089548,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0,0,0.376437521661322,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.689531376628944,0.409231043169689,0.309873682371932,0.578719832943424,0,0.233931608445408,0,0.382576664137687,0.220591419119515,0.927471342481686 | |||
|short_description=p3@Sec11c | |||
}} |
Revision as of 01:17, 6 August 2015
Short description: | p3@Sec11c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sec11c_5end |
Coexpression cluster: | MCL_coexpression_mm9:522 |
Association with transcript: | 141bp_to_ENSMUST00000155668_5end |
EntrezGene: | 66286 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.04e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.04e-08 | 32 |
hematopoietic stem cell | 1.04e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.04e-08 | 32 |
common myeloid progenitor | 9.32e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.37e-14 | 48 |
immune system | 5.37e-14 | 48 |
hematopoietic system | 5.43e-12 | 45 |
blood island | 5.43e-12 | 45 |
hemopoietic organ | 1.00e-08 | 29 |
immune organ | 1.00e-08 | 29 |
segment of respiratory tract | 1.37e-07 | 27 |
gland of gut | 2.13e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 4.00e-07 | 35 |
thymus | 8.79e-07 | 23 |
neck | 8.79e-07 | 23 |
respiratory system epithelium | 8.79e-07 | 23 |
hemolymphoid system gland | 8.79e-07 | 23 |
pharyngeal epithelium | 8.79e-07 | 23 |
thymic region | 8.79e-07 | 23 |
pharyngeal gland | 8.79e-07 | 23 |
entire pharyngeal arch endoderm | 8.79e-07 | 23 |
thymus primordium | 8.79e-07 | 23 |
early pharyngeal endoderm | 8.79e-07 | 23 |