FFCP PHASE1:Mm9::chr3:131152701..131152717,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:131152701..131152717,+
|short_description=p@chr3:131152701..131152717,+
|description=CAGE_peak_at_chr3:131152701..131152717,+
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:131152701..131152717,+ | |||
|description=CAGE_peak_at_chr3:131152701..131152717,+ | |||
|id=chr3:131152701..131152717,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.63e-11!9;CL:0002251!8.63e-11!9;CL:0000239!1.05e-07!6;CL:0000677!1.05e-07!6;CL:0000212!1.05e-07!6;CL:0000584!1.05e-07!6;CL:0000066!7.09e-07!25;CL:0002076!7.69e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.67e-07,1;CL:0002078,3.67e-07,1;CL:0000115,3.67e-07,1;CL:0002262,3.67e-07,1;CL:1000398,3.67e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.95e-19,3;DOID:4045,5.95e-19,3;DOID:0050686,9.21e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.20e-15!15;UBERON:0001242!5.82e-14!13;UBERON:0000060!5.82e-14!13;UBERON:0001262!5.82e-14!13;UBERON:0004786!5.82e-14!13;UBERON:0000160!3.52e-12!43;UBERON:0003350!8.63e-11!9;UBERON:0004808!8.63e-11!9;UBERON:0001277!8.63e-11!9;UBERON:0005409!1.15e-10!59;UBERON:0000485!2.31e-08!11;UBERON:0004923!4.87e-08!24;UBERON:0002113!8.95e-07!14;UBERON:0003918!8.95e-07!14;UBERON:0005095!8.95e-07!14;UBERON:0007687!8.95e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.08e-07,13;UBERON:0001262,2.08e-07,13;UBERON:0004786,2.08e-07,13;UBERON:0002394,3.67e-07,1;UBERON:0001281,3.67e-07,1;UBERON:0000353,3.67e-07,1;UBERON:0003497,3.67e-07,1;UBERON:0003909,3.67e-07,1;UBERON:0003928,3.67e-07,1;UBERON:0003835,3.67e-07,1;UBERON:0003513,3.67e-07,1;UBERON:0001280,3.67e-07,1;UBERON:0004647,3.67e-07,1;UBERON:0002294,3.67e-07,1;UBERON:0001173,3.67e-07,1;UBERON:0004912,3.67e-07,1;UBERON:0005171,3.67e-07,1 | |||
|phase1_expression=0,2.79180326111489,0.909998478779072,1.51232105653415,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,1.44425809875637,0.498703936075477,0.816677425049476,11.3003540298965,11.720030167857,2.09409497589519,29.4115744015507,21.1744100337118,6.79714494243615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.77320476793256,0.403367049246685,0.444756087689741,0,0,1.31759163779209,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0.597423819763102,0.189667900953082,0,1.1270773567308,0.407302655690628,0,0.49095073923223,0.316182685621286,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0.523511883968059,0.129614973291793,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.57386499620653,0,0 | |phase1_expression=0,2.79180326111489,0.909998478779072,1.51232105653415,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,1.44425809875637,0.498703936075477,0.816677425049476,11.3003540298965,11.720030167857,2.09409497589519,29.4115744015507,21.1744100337118,6.79714494243615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.77320476793256,0.403367049246685,0.444756087689741,0,0,1.31759163779209,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0.597423819763102,0.189667900953082,0,1.1270773567308,0.407302655690628,0,0.49095073923223,0.316182685621286,0.295220295959204,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.41326727862668,0.523511883968059,0.129614973291793,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0.57386499620653,0,0 | ||
|short_description=p@chr3:131152701..131152717,+ | |||
}} | }} |
Latest revision as of 01:26, 6 August 2015
Short description: | p@chr3:131152701..131152717, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:131152701..131152717, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.67e-07 | 1 |
meso-epithelial cell | 3.67e-07 | 1 |
endothelial cell | 3.67e-07 | 1 |
endothelial cell of sinusoid | 3.67e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.08e-07 | 13 |
wall of intestine | 2.08e-07 | 13 |
gastrointestinal system mucosa | 2.08e-07 | 13 |
bile duct | 3.67e-07 | 1 |
hepatic sinusoid | 3.67e-07 | 1 |
parenchyma | 3.67e-07 | 1 |
abdomen blood vessel | 3.67e-07 | 1 |
sinusoid | 3.67e-07 | 1 |
digestive system duct | 3.67e-07 | 1 |
abdominal segment blood vessel | 3.67e-07 | 1 |
trunk blood vessel | 3.67e-07 | 1 |
liver parenchyma | 3.67e-07 | 1 |
liver lobule | 3.67e-07 | 1 |
biliary system | 3.67e-07 | 1 |
biliary tree | 3.67e-07 | 1 |
biliary bud | 3.67e-07 | 1 |
hepatic duct | 3.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.95e-19 | 3 |
muscle cancer | 5.95e-19 | 3 |
organ system cancer | 9.21e-10 | 6 |