FFCP PHASE1:Mm9::chr6:69599350..69599381,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-241bp_to_ENSMUST00000166380_5end | |association_with_transcript=-241bp_to_ENSMUST00000166380_5end | ||
|cluster_id=chr6:69599350..69599381,- | |||
|description=CAGE_peak_1_at_ENSMUST00000166380_5end | |description=CAGE_peak_1_at_ENSMUST00000166380_5end | ||
|id=chr6:69599350..69599381,- | |id=chr6:69599350..69599381,- | ||
|ontology_enrichment_celltype=CL:0000553!7.26e-19!6;CL:0000556!7.26e-19!6;CL:0000050!2.41e-12!9;CL:0000414!5.71e-10!11;CL:0002027!5.77e-10!3;CL:0002006!5.77e-10!3;CL:0002024!5.77e-10!3;CL:0000839!2.53e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.46e-31,6;CL:0000556,7.46e-31,6;CL:0000050,1.26e-20,9;CL:0000839,2.62e-14,13;CL:0000763,1.24e-11,16;CL:0002027,1.42e-10,3;CL:0002006,1.42e-10,3;CL:0002024,1.42e-10,3;CL:0002031,2.10e-10,25;CL:0000049,8.50e-10,19;CL:0000945,2.06e-08,1;CL:0000236,2.06e-08,1;CL:0000826,2.06e-08,1;CL:0000988,4.53e-08,32;CL:0002032,4.53e-08,32;CL:0000037,4.53e-08,32;CL:0000837,4.53e-08,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.43e-13!48;UBERON:0002465!2.18e-10!3;UBERON:0002390!1.29e-08!45;UBERON:0003061!1.29e-08!45;UBERON:0001474!5.72e-08!22;UBERON:0004765!5.72e-08!22;UBERON:0001434!5.72e-08!22;UBERON:0002106!5.96e-08!6;UBERON:0004457!5.96e-08!6;UBERON:0000042!5.96e-08!6;UBERON:0004854!5.96e-08!6;UBERON:0009034!5.96e-08!6;UBERON:0002095!5.96e-08!6;UBERON:0004782!5.96e-08!6;UBERON:0003281!5.96e-08!6;UBERON:0009664!5.96e-08!6;UBERON:0002296!5.96e-08!6;UBERON:0005602!5.96e-08!6;UBERON:0001179!5.96e-08!6;UBERON:0006293!5.96e-08!6;UBERON:0002405!9.67e-08!70;UBERON:0001962!2.48e-07!2;UBERON:0001961!2.48e-07!2;UBERON:0001744!2.48e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,6.63e-23,3;UBERON:0001962,1.60e-15,2;UBERON:0001961,1.60e-15,2;UBERON:0001744,1.60e-15,2;UBERON:0001474,7.13e-12,22;UBERON:0004765,7.13e-12,22;UBERON:0001434,7.13e-12,22;UBERON:0002193,1.02e-11,48;UBERON:0002405,1.02e-11,48;UBERON:0002371,1.24e-11,16;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0003199,1.24e-08,1;UBERON:0002204,4.39e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,2.83465374345756,1.39912375625629,5.0473946457318,3.15363197293199,3.81950686618227,0.0850432901510698,0,0,1.91990907352088,2.75291137280604,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,17.6077760880077,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0.484875253135222,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0.188368457004691,0.683471138605126,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,2.83465374345756,1.39912375625629,5.0473946457318,3.15363197293199,3.81950686618227,0.0850432901510698,0,0,1.91990907352088,2.75291137280604,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,17.6077760880077,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0.484875253135222,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0.188368457004691,0.683471138605126,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000166380 | |short_description=p1@ENSMUST00000166380 | ||
}} | }} |
Latest revision as of 01:32, 6 August 2015
Short description: | p1@ENSMUST00000166380 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000166380_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -241bp_to_ENSMUST00000166380_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.46e-31 | 6 |
megakaryocyte | 7.46e-31 | 6 |
megakaryocyte-erythroid progenitor cell | 1.26e-20 | 9 |
myeloid lineage restricted progenitor cell | 2.62e-14 | 13 |
myeloid cell | 1.24e-11 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.42e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.42e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.42e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 2.10e-10 | 25 |
common myeloid progenitor | 8.50e-10 | 19 |
lymphocyte of B lineage | 2.06e-08 | 1 |
B cell | 2.06e-08 | 1 |
pro-B cell | 2.06e-08 | 1 |
hematopoietic cell | 4.53e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.53e-08 | 32 |
hematopoietic stem cell | 4.53e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.53e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 6.63e-23 | 3 |
gut-associated lymphoid tissue | 1.60e-15 | 2 |
mucosa-associated lymphoid tissue | 1.60e-15 | 2 |
lymphoid tissue | 1.60e-15 | 2 |
bone element | 7.13e-12 | 22 |
skeletal element | 7.13e-12 | 22 |
skeletal system | 7.13e-12 | 22 |
hemolymphoid system | 1.02e-11 | 48 |
immune system | 1.02e-11 | 48 |
bone marrow | 1.24e-11 | 16 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
egg chamber | 1.24e-08 | 1 |
musculoskeletal system | 4.39e-08 | 32 |