FFCP PHASE1:Mm9::chr16:15895817..15895825,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:15895817..15895825,-
|short_description=p@chr16:15895817..15895825,-
|description=CAGE_peak_at_chr16:15895817..15895825,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:15895817..15895825,- | |||
|description=CAGE_peak_at_chr16:15895817..15895825,- | |||
|id=chr16:15895817..15895825,- | |||
|ontology_enrichment_celltype=CL:0000333!6.15e-47!10;CL:0000095!6.15e-47!10;CL:0000243!6.15e-47!10;CL:0000123!6.15e-47!10;CL:0000125!6.15e-47!10;CL:0000030!6.15e-47!10;CL:0000339!6.15e-47!10;CL:0002453!1.03e-33!8;CL:0000128!1.91e-20!6;CL:0000126!1.91e-20!6;CL:0000127!1.91e-20!6;CL:0002604!2.05e-16!2;CL:0002605!2.05e-16!2;CL:0000864!4.09e-16!2;CL:0000878!4.09e-16!2;CL:0000129!4.09e-16!2;CL:0000325!2.64e-15!2;CL:0000217!2.64e-15!2;CL:0000328!2.64e-15!2;CL:0002573!2.64e-15!2;CL:0002376!2.64e-15!2;CL:0000218!2.64e-15!2;CL:0000692!2.64e-15!2;CL:0002377!2.64e-15!2;CL:0002375!2.64e-15!2;CL:0000055!5.30e-14!50;CL:0002319!2.82e-13!43;CL:0000221!5.87e-13!44;CL:0000133!5.87e-13!44;CL:0000215!1.59e-10!3;CL:0000630!1.59e-10!3;CL:0002321!9.52e-10!70;CL:0000220!9.52e-10!70;CL:0002194!1.61e-08!4;CL:0000766!1.61e-08!4;CL:0000576!1.61e-08!4;CL:0000235!1.61e-08!4;CL:0002009!1.61e-08!4;CL:0000040!1.61e-08!4;CL:0000559!1.61e-08!4;CL:0000219!3.08e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.68e-58,2;CL:0002604,1.68e-58,2;CL:0002453,2.45e-33,8;CL:0000333,6.24e-27,10;CL:0000095,6.24e-27,10;CL:0000243,6.24e-27,10;CL:0000123,6.24e-27,10;CL:0000125,6.24e-27,10;CL:0000030,6.24e-27,10;CL:0000339,6.24e-27,10;CL:0000128,1.98e-20,6;CL:0000126,1.98e-20,6;CL:0000127,1.98e-20,6;CL:0000878,1.33e-15,2;CL:0000129,1.33e-15,2;CL:0002194,1.73e-08,4;CL:0000766,1.73e-08,4;CL:0000234,1.73e-08,4;CL:0000576,1.73e-08,4;CL:0000235,1.73e-08,4;CL:0000864,1.73e-08,4;CL:0002009,1.73e-08,4;CL:0000040,1.73e-08,4;CL:0000559,1.73e-08,4;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.91e-07!75;UBERON:0001016!2.91e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.08e-17,7;UBERON:0003022,1.08e-17,7;UBERON:0002421,1.08e-17,7;UBERON:0000349,1.08e-17,7;UBERON:0002600,1.08e-17,7;UBERON:0002619,5.82e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,6.15121311656521,8.36048566019419,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,6.15121311656521,8.36048566019419,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:15895817..15895825,- | |||
}} | }} |
Latest revision as of 02:01, 6 August 2015
Short description: | p@chr16:15895817..15895825, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:15895817..15895825, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.68e-58 | 2 |
astrocyte of the hippocampus | 1.68e-58 | 2 |
oligodendrocyte precursor cell | 2.45e-33 | 8 |
migratory neural crest cell | 6.24e-27 | 10 |
neuron associated cell | 6.24e-27 | 10 |
glial cell (sensu Vertebrata) | 6.24e-27 | 10 |
neuron associated cell (sensu Vertebrata) | 6.24e-27 | 10 |
glial cell | 6.24e-27 | 10 |
glioblast | 6.24e-27 | 10 |
glioblast (sensu Vertebrata) | 6.24e-27 | 10 |
oligodendrocyte | 1.98e-20 | 6 |
macroglial cell | 1.98e-20 | 6 |
astrocyte | 1.98e-20 | 6 |
central nervous system macrophage | 1.33e-15 | 2 |
microglial cell | 1.33e-15 | 2 |
monopoietic cell | 1.73e-08 | 4 |
myeloid leukocyte | 1.73e-08 | 4 |
phagocyte | 1.73e-08 | 4 |
monocyte | 1.73e-08 | 4 |
macrophage | 1.73e-08 | 4 |
tissue-resident macrophage | 1.73e-08 | 4 |
macrophage dendritic cell progenitor | 1.73e-08 | 4 |
monoblast | 1.73e-08 | 4 |
promonocyte | 1.73e-08 | 4 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.08e-17 | 7 |
lobe parts of cerebral cortex | 1.08e-17 | 7 |
hippocampal formation | 1.08e-17 | 7 |
limbic system | 1.08e-17 | 7 |
limbic lobe | 1.08e-17 | 7 |
regional part of cerebral cortex | 5.82e-08 | 17 |