FFCP PHASE1:Mm9::chr18:77736935..77736948,-: Difference between revisions
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|id=chr18:77736935..77736948,-
|short_description=p@chr18:77736935..77736948,-
|description=CAGE_peak_at_chr18:77736935..77736948,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=199 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:77736935..77736948,- | |||
|description=CAGE_peak_at_chr18:77736935..77736948,- | |||
|id=chr18:77736935..77736948,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.51e-15!71;UBERON:0003075!1.51e-15!71;UBERON:0007284!1.51e-15!71;UBERON:0003056!4.38e-14!49;UBERON:0000033!1.93e-12!63;UBERON:0004121!6.51e-12!102;UBERON:0000924!6.51e-12!102;UBERON:0006601!6.51e-12!102;UBERON:0000956!2.66e-11!21;UBERON:0001869!2.66e-11!21;UBERON:0000203!2.66e-11!21;UBERON:0000955!5.54e-11!50;UBERON:0006238!5.54e-11!50;UBERON:0003080!1.01e-10!40;UBERON:0002619!1.43e-10!17;UBERON:0002021!1.85e-10!10;UBERON:0000411!1.85e-10!10;UBERON:0001950!1.85e-10!10;UBERON:0002616!2.28e-10!49;UBERON:0002780!2.88e-10!39;UBERON:0001890!2.88e-10!39;UBERON:0006240!2.88e-10!39;UBERON:0001049!6.90e-10!52;UBERON:0005068!6.90e-10!52;UBERON:0006241!6.90e-10!52;UBERON:0007135!6.90e-10!52;UBERON:0001017!1.20e-08!73;UBERON:0005743!1.20e-08!73;UBERON:0002791!1.23e-08!29;UBERON:0003528!1.23e-08!29;UBERON:0001893!1.23e-08!29;UBERON:0000073!4.65e-08!75;UBERON:0001016!4.65e-08!75;UBERON:0000153!8.26e-08!94;UBERON:0002020!8.75e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.90e-59,10;UBERON:0000411,6.90e-59,10;UBERON:0001950,6.90e-59,10;UBERON:0002619,2.52e-42,17;UBERON:0000956,3.78e-34,21;UBERON:0001869,3.78e-34,21;UBERON:0000203,3.78e-34,21;UBERON:0003528,1.51e-24,29;UBERON:0002791,1.51e-24,29;UBERON:0001893,1.51e-24,29;UBERON:0002020,7.84e-21,34;UBERON:0002780,4.59e-18,39;UBERON:0001890,4.59e-18,39;UBERON:0006240,4.59e-18,39;UBERON:0003080,1.36e-17,40;UBERON:0003056,2.50e-17,49;UBERON:0002616,3.40e-15,46;UBERON:0000955,7.45e-15,47;UBERON:0006238,7.45e-15,47;UBERON:0001049,2.40e-13,52;UBERON:0005068,2.40e-13,52;UBERON:0006241,2.40e-13,52;UBERON:0007135,2.40e-13,52;UBERON:0002346,4.65e-13,64;UBERON:0003075,4.65e-13,64;UBERON:0007284,4.65e-13,64;UBERON:0000073,8.06e-13,54;UBERON:0010371,2.48e-11,73;UBERON:0001017,3.01e-09,73;UBERON:0001016,5.62e-09,75;UBERON:0010314,8.77e-09,92;UBERON:0004121,1.79e-08,95;UBERON:0000924,1.79e-08,95;UBERON:0006601,1.79e-08,95 | |||
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| ||
|short_description=p@chr18:77736935..77736948,- | |||
}} | }} |
Latest revision as of 03:45, 6 August 2015
Short description: | p@chr18:77736935..77736948, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:77736935..77736948, - |
Coexpression cluster: | MCL_coexpression_mm9:199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.90e-59 | 10 |
visual cortex | 6.90e-59 | 10 |
neocortex | 6.90e-59 | 10 |
regional part of cerebral cortex | 2.52e-42 | 17 |
cerebral cortex | 3.78e-34 | 21 |
cerebral hemisphere | 3.78e-34 | 21 |
pallium | 3.78e-34 | 21 |
brain grey matter | 1.51e-24 | 29 |
regional part of telencephalon | 1.51e-24 | 29 |
telencephalon | 1.51e-24 | 29 |
gray matter | 7.84e-21 | 34 |
regional part of forebrain | 4.59e-18 | 39 |
forebrain | 4.59e-18 | 39 |
future forebrain | 4.59e-18 | 39 |
anterior neural tube | 1.36e-17 | 40 |
pre-chordal neural plate | 2.50e-17 | 49 |
regional part of brain | 3.40e-15 | 46 |
brain | 7.45e-15 | 47 |
future brain | 7.45e-15 | 47 |
neural tube | 2.40e-13 | 52 |
neural rod | 2.40e-13 | 52 |
future spinal cord | 2.40e-13 | 52 |
neural keel | 2.40e-13 | 52 |
neurectoderm | 4.65e-13 | 64 |
neural plate | 4.65e-13 | 64 |
presumptive neural plate | 4.65e-13 | 64 |
regional part of nervous system | 8.06e-13 | 54 |
ecto-epithelium | 2.48e-11 | 73 |
central nervous system | 3.01e-09 | 73 |
nervous system | 5.62e-09 | 75 |
structure with developmental contribution from neural crest | 8.77e-09 | 92 |
ectoderm-derived structure | 1.79e-08 | 95 |
ectoderm | 1.79e-08 | 95 |
presumptive ectoderm | 1.79e-08 | 95 |