FFCP PHASE1:Mm9::chr1:89523009..89523039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:89523009..89523039,- | |||
|description=CAGE_peak_at_chr1:89523009..89523039,- | |description=CAGE_peak_at_chr1:89523009..89523039,- | ||
|id=chr1:89523009..89523039,- | |id=chr1:89523009..89523039,- | ||
|ontology_enrichment_celltype=CL:0000988!1.88e-24!32;CL:0002032!1.88e-24!32;CL:0000037!1.88e-24!32;CL:0000566!1.88e-24!32;CL:0000837!1.88e-24!32;CL:0000838!2.56e-19!12;CL:0002320!9.82e-18!46;CL:0000134!9.82e-18!46;CL:0000542!1.11e-17!13;CL:0000051!1.11e-17!13;CL:0000084!5.06e-17!11;CL:0000827!5.06e-17!11;CL:0002031!5.16e-17!25;CL:0000624!1.00e-14!8;CL:0000219!2.00e-14!54;CL:0000034!1.08e-13!97;CL:0000738!4.64e-13!17;CL:0002087!4.64e-13!17;CL:0000791!5.60e-13!9;CL:0000789!5.60e-13!9;CL:0002420!5.60e-13!9;CL:0002419!5.60e-13!9;CL:0000790!5.60e-13!9;CL:0000723!5.04e-11!91;CL:0000048!5.04e-11!91;CL:0000063!5.64e-11!66;CL:0000893!5.20e-10!6;CL:0002489!5.20e-10!6;CL:0000898!5.20e-10!6;CL:0000809!5.20e-10!6;CL:0000810!5.20e-10!6;CL:0000895!5.20e-10!6;CL:0000808!5.20e-10!6;CL:0000894!5.20e-10!6;CL:0000806!5.20e-10!6;CL:0000807!5.20e-10!6;CL:0000805!5.20e-10!6;CL:0002425!5.20e-10!6;CL:0002436!5.20e-10!6;CL:0002427!5.20e-10!6;CL:0002428!5.20e-10!6;CL:0002429!5.20e-10!6;CL:0002433!5.20e-10!6;CL:0002431!5.20e-10!6;CL:0002432!5.20e-10!6;CL:0000144!8.66e-10!121;CL:0000012!8.66e-10!121;CL:0000049!2.47e-09!19;CL:0002371!2.78e-07!118;CL:0000553!4.08e-07!6;CL:0000556!4.08e-07!6 | |ontology_enrichment_celltype=CL:0000988!1.88e-24!32;CL:0002032!1.88e-24!32;CL:0000037!1.88e-24!32;CL:0000566!1.88e-24!32;CL:0000837!1.88e-24!32;CL:0000838!2.56e-19!12;CL:0002320!9.82e-18!46;CL:0000134!9.82e-18!46;CL:0000542!1.11e-17!13;CL:0000051!1.11e-17!13;CL:0000084!5.06e-17!11;CL:0000827!5.06e-17!11;CL:0002031!5.16e-17!25;CL:0000624!1.00e-14!8;CL:0000219!2.00e-14!54;CL:0000034!1.08e-13!97;CL:0000738!4.64e-13!17;CL:0002087!4.64e-13!17;CL:0000791!5.60e-13!9;CL:0000789!5.60e-13!9;CL:0002420!5.60e-13!9;CL:0002419!5.60e-13!9;CL:0000790!5.60e-13!9;CL:0000723!5.04e-11!91;CL:0000048!5.04e-11!91;CL:0000063!5.64e-11!66;CL:0000893!5.20e-10!6;CL:0002489!5.20e-10!6;CL:0000898!5.20e-10!6;CL:0000809!5.20e-10!6;CL:0000810!5.20e-10!6;CL:0000895!5.20e-10!6;CL:0000808!5.20e-10!6;CL:0000894!5.20e-10!6;CL:0000806!5.20e-10!6;CL:0000807!5.20e-10!6;CL:0000805!5.20e-10!6;CL:0002425!5.20e-10!6;CL:0002436!5.20e-10!6;CL:0002427!5.20e-10!6;CL:0002428!5.20e-10!6;CL:0002429!5.20e-10!6;CL:0002433!5.20e-10!6;CL:0002431!5.20e-10!6;CL:0002432!5.20e-10!6;CL:0000144!8.66e-10!121;CL:0000012!8.66e-10!121;CL:0000049!2.47e-09!19;CL:0002371!2.78e-07!118;CL:0000553!4.08e-07!6;CL:0000556!4.08e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.47e-08,1;CL:0002078,1.47e-08,1;CL:0000115,1.47e-08,1;CL:0002262,1.47e-08,1;CL:1000398,1.47e-08,1;CL:0000815,2.44e-08,1;CL:0000792,2.44e-08,1;CL:0000945,2.89e-08,1;CL:0000236,2.89e-08,1;CL:0000826,2.89e-08,1;CL:0000355,4.59e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.62e-09!3;DOID:4045!2.62e-09!3 | |ontology_enrichment_disease=DOID:0060100!2.62e-09!3;DOID:4045!2.62e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.59e-23,3;DOID:4045,5.59e-23,3;DOID:0050686,8.07e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!9.82e-18!46 | |ontology_enrichment_uberon=UBERON:0002384!9.82e-18!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.47e-08,1;UBERON:0001281,1.47e-08,1;UBERON:0000353,1.47e-08,1;UBERON:0003497,1.47e-08,1;UBERON:0003909,1.47e-08,1;UBERON:0003928,1.47e-08,1;UBERON:0003835,1.47e-08,1;UBERON:0003513,1.47e-08,1;UBERON:0001280,1.47e-08,1;UBERON:0004647,1.47e-08,1;UBERON:0002294,1.47e-08,1;UBERON:0001173,1.47e-08,1;UBERON:0004912,1.47e-08,1;UBERON:0005171,1.47e-08,1;UBERON:0001134,4.59e-08,9;UBERON:0002036,4.59e-08,9;UBERON:0002385,4.59e-08,9;UBERON:0000486,4.59e-08,9;UBERON:0007503,4.59e-08,9;UBERON:0001015,4.59e-08,9;UBERON:0002329,4.59e-08,9;UBERON:0003082,4.59e-08,9;UBERON:0003059,4.59e-08,9;UBERON:0007282,4.59e-08,9;UBERON:0004290,4.59e-08,9;UBERON:0009618,4.59e-08,9;UBERON:0000383,2.61e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.281577444303333,0.234064526321993,0.171217968225505,0,0.513602189793617,0.961624426608971,0,0,0.699561878128147,0.630924330716475,0.685572168028694,0.84877930359606,0,0.297872853602656,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,6.2506827561904,2.09409497589519,18.8234076169925,13.6609096991689,6.311634589405,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43778149407104,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.679913719975421,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.281577444303333,0.234064526321993,0.171217968225505,0,0.513602189793617,0.961624426608971,0,0,0.699561878128147,0.630924330716475,0.685572168028694,0.84877930359606,0,0.297872853602656,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,6.2506827561904,2.09409497589519,18.8234076169925,13.6609096991689,6.311634589405,0,0,0,0,0,0,0,0,0,1.00669563634642,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43778149407104,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0.679913719975421,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:89523009..89523039,- | |short_description=p@chr1:89523009..89523039,- | ||
}} | }} |
Latest revision as of 03:57, 6 August 2015
Short description: | p@chr1:89523009..89523039, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:89523009..89523039, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.47e-08 | 1 |
meso-epithelial cell | 1.47e-08 | 1 |
endothelial cell | 1.47e-08 | 1 |
endothelial cell of sinusoid | 1.47e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.47e-08 | 1 |
regulatory T cell | 2.44e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.44e-08 | 1 |
lymphocyte of B lineage | 2.89e-08 | 1 |
B cell | 2.89e-08 | 1 |
pro-B cell | 2.89e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.47e-08 | 1 |
hepatic sinusoid | 1.47e-08 | 1 |
parenchyma | 1.47e-08 | 1 |
abdomen blood vessel | 1.47e-08 | 1 |
sinusoid | 1.47e-08 | 1 |
digestive system duct | 1.47e-08 | 1 |
abdominal segment blood vessel | 1.47e-08 | 1 |
trunk blood vessel | 1.47e-08 | 1 |
liver parenchyma | 1.47e-08 | 1 |
liver lobule | 1.47e-08 | 1 |
biliary system | 1.47e-08 | 1 |
biliary tree | 1.47e-08 | 1 |
biliary bud | 1.47e-08 | 1 |
hepatic duct | 1.47e-08 | 1 |
skeletal muscle tissue | 4.59e-08 | 9 |
striated muscle tissue | 4.59e-08 | 9 |
muscle tissue | 4.59e-08 | 9 |
multilaminar epithelium | 4.59e-08 | 9 |
epithelial vesicle | 4.59e-08 | 9 |
musculature | 4.59e-08 | 9 |
somite | 4.59e-08 | 9 |
myotome | 4.59e-08 | 9 |
presomitic mesoderm | 4.59e-08 | 9 |
presumptive segmental plate | 4.59e-08 | 9 |
dermomyotome | 4.59e-08 | 9 |
trunk paraxial mesoderm | 4.59e-08 | 9 |
musculature of body | 2.61e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.59e-23 | 3 |
muscle cancer | 5.59e-23 | 3 |
organ system cancer | 8.07e-12 | 6 |