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FFCP PHASE1:Mm9::chrX:34529477..34529502,-: Difference between revisions

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{{FFCP|EntrezGene=56526|HGNC=|MCL_coexpression_id=893|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128766_5end|description=CAGE_peak_1_at_Sept6_5end|id=chrX:34529477..34529502,-|ontology_enrichment_celltype=CL:0000838!2.81e-09!12;CL:0000542!3.43e-09!13;CL:0000051!3.43e-09!13;CL:0000084!1.14e-08!11;CL:0000827!1.14e-08!11;CL:0000791!2.51e-07!9;CL:0000789!2.51e-07!9;CL:0002420!2.51e-07!9;CL:0002419!2.51e-07!9;CL:0000790!2.51e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,2.81e-09,12;CL:0000542,3.42e-09,13;CL:0000051,3.42e-09,13;CL:0000084,1.14e-08,11;CL:0000827,1.14e-08,11;CL:0000791,2.51e-07,9;CL:0000789,2.51e-07,9;CL:0002420,2.51e-07,9;CL:0002419,2.51e-07,9;CL:0000790,2.51e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.39e-13!94;UBERON:0004177!4.84e-12!29;UBERON:0002370!5.13e-11!23;UBERON:0000974!5.13e-11!23;UBERON:0004807!5.13e-11!23;UBERON:0005058!5.13e-11!23;UBERON:0003351!5.13e-11!23;UBERON:0009113!5.13e-11!23;UBERON:0003295!5.13e-11!23;UBERON:0009722!5.13e-11!23;UBERON:0005562!5.13e-11!23;UBERON:0007690!5.13e-11!23;UBERON:0007811!2.44e-10!86;UBERON:0003408!3.65e-10!24;UBERON:0006562!7.38e-10!24;UBERON:0001557!7.38e-10!24;UBERON:0001042!7.38e-10!24;UBERON:0008814!7.38e-10!24;UBERON:0009145!7.38e-10!24;UBERON:0000072!1.03e-07!27;UBERON:0002193!1.44e-07!48;UBERON:0002390!2.48e-07!45;UBERON:0003061!2.48e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.83e-12,29;UBERON:0005057,4.83e-12,29;UBERON:0002370,5.13e-11,23;UBERON:0000974,5.13e-11,23;UBERON:0004807,5.13e-11,23;UBERON:0005058,5.13e-11,23;UBERON:0003351,5.13e-11,23;UBERON:0009113,5.13e-11,23;UBERON:0003295,5.13e-11,23;UBERON:0009722,5.13e-11,23;UBERON:0005562,5.13e-11,23;UBERON:0007690,5.13e-11,23;UBERON:0003408,3.65e-10,24;UBERON:0000153,4.47e-10,43;UBERON:0006562,7.37e-10,24;UBERON:0001557,7.37e-10,24;UBERON:0001042,7.37e-10,24;UBERON:0008814,7.37e-10,24;UBERON:0009145,7.37e-10,24;UBERON:0000072,1.03e-07,27;UBERON:0002193,1.41e-07,48;UBERON:0002405,1.41e-07,48;UBERON:0002390,2.43e-07,45;UBERON:0003061,2.43e-07,45;UBERON:0007811,3.00e-07,36;UBERON:0000077,3.90e-07,35|phase1_expression=11.69086583865,1.39590163055744,0.454999239389536,0,0.500895729946347,2.18243053485457,1.86890112476421,64.9490316911129,164.159650028843,153.78039379355,58.7277631013482,72.5128925267608,81.1491459873915,74.9192848730808,8.66085380720723,11.3386149738303,5.59649502502517,73.1872223631111,74.8644807487334,53.8974857783498,11.9911039113008,80.524961423918,92.4647253551831,10.8794847499517,14.2233754261645,0.57423196411502,1.29228598847722,2.15471232685889,3.04037471130198,2.26827116783938,1.77384408524244,2.54012269383853,7.38077745101484,15.8481681015439,8.66554859253824,12.3013637565284,8.5751129630195,23.8563029520037,12.5013655123808,16.2292360631877,24.7057224973026,28.6879103682547,26.7030694167134,5.28766635497425,7.19776211658553,10.2786181210542,2.34717403304412,1.52617609466313,4.17403747195497,0.777719596297134,13.1587236327841,0,65.7707815746327,84.8673706153273,95.1145451573173,12.0911934936895,10.601737277734,1.03134418455488,14.1621522601718,23.2756030879694,12.0427966666174,6.43804610931351,13.3394219416671,0.449949858640699,1.97773272513395,1.4209602298922,2.39680088414724,1.15265491596466,7.56934169851887,7.83034442323806,10.0955981448663,13.139945282575,15.6816664075646,17.6386750869534,18.3064849644831,15.6267193723704,37.4393995397922,18.1316020080967,19.2008166570304,17.9365351313064,22.8719109006024,16.1483144872596,15.355064945076,16.8828783009504,16.8078072554491,26.2219441071564,20.5015220350708,23.8591290656385,3.25622631332691,6.49915416918356,2.31891590961342,0.860423876981386,0.679971333707751,1.61910957491345,0,0.896053774194671,7.02222100658759,13.9752864514007,9.35229616570328,8.83348936275851,25.9151892389092,15.3991772897181,7.64415719119937,7.11066703153331,7.57718643539249,7.34743609877786,4.04419556011827,6.50848114398642,41.4300613835475,10.8362761517322,16.8280766963152,16.4411358288556,16.3737003051802,12.9621470875255,12.6995803706561,6.6603293404728,0.741584903203122,6.50697106139602,13.2691582792481,15.6913844448987,12.1462835153216,9.69750506270444,1.86391761218122,19.9090941967852,11.51956887474,9.70736809792647,40.2578818339892,28.7953310876836,33.5465399472891,16.1773890557209,9.15001205637253,27.1413400563787,20.3374454624963,23.5258220743904,15.1685272528479,15.5751612545047,13.2391173005411,11.8186622079588,1.76905930903572,3.15662783829711,16.6554166992261,13.104419952708,15.1252189036493,13.2620239695429,11.838350852331,12.1708034270607,13.0245397138023,6.20888089773638,56.9099501342703,52.1932781263181,41.5244653026919,35.9481001181223,33.3656699070717,24.0293994900295,26.9574598694406,10.1507476077432,31.5995934290956,31.9111404822247,26.7113689431857,15.5344329401626,28.3776532577126,41.2342120745724,44.9814997611899,47.6169440828717,48.7484076724115,45.5766531710799,34.6072687805509,29.6583969612611,23.8611782374547,10.3425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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56526
|HGNC=
|MCL_coexpression_id=893
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000128766_5end
|cluster_id=chrX:34529477..34529502,-
|description=CAGE_peak_1_at_Sept6_5end
|id=chrX:34529477..34529502,-
|ontology_enrichment_celltype=CL:0000838!2.81e-09!12;CL:0000542!3.43e-09!13;CL:0000051!3.43e-09!13;CL:0000084!1.14e-08!11;CL:0000827!1.14e-08!11;CL:0000791!2.51e-07!9;CL:0000789!2.51e-07!9;CL:0002420!2.51e-07!9;CL:0002419!2.51e-07!9;CL:0000790!2.51e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,2.81e-09,12;CL:0000542,3.42e-09,13;CL:0000051,3.42e-09,13;CL:0000084,1.14e-08,11;CL:0000827,1.14e-08,11;CL:0000791,2.51e-07,9;CL:0000789,2.51e-07,9;CL:0002420,2.51e-07,9;CL:0002419,2.51e-07,9;CL:0000790,2.51e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.39e-13!94;UBERON:0004177!4.84e-12!29;UBERON:0002370!5.13e-11!23;UBERON:0000974!5.13e-11!23;UBERON:0004807!5.13e-11!23;UBERON:0005058!5.13e-11!23;UBERON:0003351!5.13e-11!23;UBERON:0009113!5.13e-11!23;UBERON:0003295!5.13e-11!23;UBERON:0009722!5.13e-11!23;UBERON:0005562!5.13e-11!23;UBERON:0007690!5.13e-11!23;UBERON:0007811!2.44e-10!86;UBERON:0003408!3.65e-10!24;UBERON:0006562!7.38e-10!24;UBERON:0001557!7.38e-10!24;UBERON:0001042!7.38e-10!24;UBERON:0008814!7.38e-10!24;UBERON:0009145!7.38e-10!24;UBERON:0000072!1.03e-07!27;UBERON:0002193!1.44e-07!48;UBERON:0002390!2.48e-07!45;UBERON:0003061!2.48e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.83e-12,29;UBERON:0005057,4.83e-12,29;UBERON:0002370,5.13e-11,23;UBERON:0000974,5.13e-11,23;UBERON:0004807,5.13e-11,23;UBERON:0005058,5.13e-11,23;UBERON:0003351,5.13e-11,23;UBERON:0009113,5.13e-11,23;UBERON:0003295,5.13e-11,23;UBERON:0009722,5.13e-11,23;UBERON:0005562,5.13e-11,23;UBERON:0007690,5.13e-11,23;UBERON:0003408,3.65e-10,24;UBERON:0000153,4.47e-10,43;UBERON:0006562,7.37e-10,24;UBERON:0001557,7.37e-10,24;UBERON:0001042,7.37e-10,24;UBERON:0008814,7.37e-10,24;UBERON:0009145,7.37e-10,24;UBERON:0000072,1.03e-07,27;UBERON:0002193,1.41e-07,48;UBERON:0002405,1.41e-07,48;UBERON:0002390,2.43e-07,45;UBERON:0003061,2.43e-07,45;UBERON:0007811,3.00e-07,36;UBERON:0000077,3.90e-07,35
|phase1_expression=11.69086583865,1.39590163055744,0.454999239389536,0,0.500895729946347,2.18243053485457,1.86890112476421,64.9490316911129,164.159650028843,153.78039379355,58.7277631013482,72.5128925267608,81.1491459873915,74.9192848730808,8.66085380720723,11.3386149738303,5.59649502502517,73.1872223631111,74.8644807487334,53.8974857783498,11.9911039113008,80.524961423918,92.4647253551831,10.8794847499517,14.2233754261645,0.57423196411502,1.29228598847722,2.15471232685889,3.04037471130198,2.26827116783938,1.77384408524244,2.54012269383853,7.38077745101484,15.8481681015439,8.66554859253824,12.3013637565284,8.5751129630195,23.8563029520037,12.5013655123808,16.2292360631877,24.7057224973026,28.6879103682547,26.7030694167134,5.28766635497425,7.19776211658553,10.2786181210542,2.34717403304412,1.52617609466313,4.17403747195497,0.777719596297134,13.1587236327841,0,65.7707815746327,84.8673706153273,95.1145451573173,12.0911934936895,10.601737277734,1.03134418455488,14.1621522601718,23.2756030879694,12.0427966666174,6.43804610931351,13.3394219416671,0.449949858640699,1.97773272513395,1.4209602298922,2.39680088414724,1.15265491596466,7.56934169851887,7.83034442323806,10.0955981448663,13.139945282575,15.6816664075646,17.6386750869534,18.3064849644831,15.6267193723704,37.4393995397922,18.1316020080967,19.2008166570304,17.9365351313064,22.8719109006024,16.1483144872596,15.355064945076,16.8828783009504,16.8078072554491,26.2219441071564,20.5015220350708,23.8591290656385,3.25622631332691,6.49915416918356,2.31891590961342,0.860423876981386,0.679971333707751,1.61910957491345,0,0.896053774194671,7.02222100658759,13.9752864514007,9.35229616570328,8.83348936275851,25.9151892389092,15.3991772897181,7.64415719119937,7.11066703153331,7.57718643539249,7.34743609877786,4.04419556011827,6.50848114398642,41.4300613835475,10.8362761517322,16.8280766963152,16.4411358288556,16.3737003051802,12.9621470875255,12.6995803706561,6.6603293404728,0.741584903203122,6.50697106139602,13.2691582792481,15.6913844448987,12.1462835153216,9.69750506270444,1.86391761218122,19.9090941967852,11.51956887474,9.70736809792647,40.2578818339892,28.7953310876836,33.5465399472891,16.1773890557209,9.15001205637253,27.1413400563787,20.3374454624963,23.5258220743904,15.1685272528479,15.5751612545047,13.2391173005411,11.8186622079588,1.76905930903572,3.15662783829711,16.6554166992261,13.104419952708,15.1252189036493,13.2620239695429,11.838350852331,12.1708034270607,13.0245397138023,6.20888089773638,56.9099501342703,52.1932781263181,41.5244653026919,35.9481001181223,33.3656699070717,24.0293994900295,26.9574598694406,10.1507476077432,31.5995934290956,31.9111404822247,26.7113689431857,15.5344329401626,28.3776532577126,41.2342120745724,44.9814997611899,47.6169440828717,48.7484076724115,45.5766531710799,34.6072687805509,29.6583969612611,23.8611782374547,10.342550236983,5.18840381093477,4.09359964790931,6.36695334344047,4.56301823785264,14.5100064509248,13.0688857721691,3.30418782983798,6.34681359992506,16.2099070406778,10.4506502337197,8.76298736990235,7.66397393568702,6.0042071838115,7.98947629672748,7.11793592316767,8.72904460037258,7.79139147280835,7.16243299348143,10.1381325301942,13.4822911298133,4.97117514711797,7.36822711041159,11.1904061562318,14.5095611014356,18.0332377076929,11.6081256871829,11.4431967428899,7.85521182771568,4.42655759869801,3.98547399544926,4.70996183524124,5.42947521255922,1.77871576252289,9.17648081438517,6.87956482896211,8.31989815823959,5.47722327748958,6.75296047306767,11.7127891819453,8.63088412352432,4.37765112292595,6.31491250332587,5.75072826109418,10.0478055870496,4.68056509671841,2.27320990152401,0.896987067609561,5.30687873499704,12.7479701214957,17.4332098828846,14.3409179268983,9.16623463186016,7.51008794523207,9.38035041674168,7.85544014923845,3.90267295715598,6.62067605246002,7.75126413770712,7.81328366421687,8.84861899464985,11.0518388394173,6.50920763616802,3.01582567878545,2.17562273527484,1.47529281905711,3.58717770196152,18.7844190285717,16.6440594960929,28.6886154409182,8.83648245215305,9.78075480190396,7.41833614163613,13.1408272617007,5.01834475700359,4.45597348164788,3.96307143104365,7.69140333182299,11.6902343164525,6.32460444714438,10.2822821254978,10.3616262202036,12.9987890677096,11.8907480328111,8.90838664051691,5.30980553359851,7.76898035695941,8.46505959501303,7.16699303072413,6.20133975049623,5.22639751504677,4.65170927702798,6.18007340111759,7.84294232446387,7.9009189483954,5.27093042874994,2.06271086496374,3.74483566329167,15.3051929926614,17.0753462593236,18.6473220477485,18.6207245324387,19.4422011186257,15.3030589159972,11.8741330154694,3.52007562095566,0.21183207086382,2.42581237860458,3.95727007059552,3.87514624070173,8.44380948994182,4.05865969610664,4.59594519286172,7.86998258900597,16.1320012749143,29.5606623780285,14.6534676253888,14.2599786074678,17.5182665014363,24.3315725343425,26.3094899187501,73.9406170473271,77.9529589442775,77.944785225695,4.77335309007557,19.9291675956115,12.8091264289915,9.50446999231851,7.10900206449194,7.42432716737004,8.36158947585888,10.083721598491,4.71160695571253,8.03612834409116,6.83473244395618,17.4744810992099,9.71857549285862,9.43113395605456,10.6948153589226,11.1077448190849,9.2925869019928,11.9704383418669,18.228613878153,26.843992172982,18.3603931827765,18.1458903942455,53.7218905067903,52.3031055448624,52.896142939886,60.8029451536081,65.1657172229632,65.5648470778174,57.814011219105,52.2820926198003,49.6754933744886,50.9823536521949,51.0180496792413,57.5001496364539,49.1642510782084,54.9321440253374,2.72076460338254,3.99574716073316,2.9605572681127,1.67884616364078,9.46629010757733,8.07034644440082,9.15758121336325,3.85863082342319,4.01257683228291,23.7195773899168,24.8575627713876,15.4681788628637,18.2164373284309,22.6077231524312,19.6402413321322,18.9006300064906,20.2644541450899,25.8291173120997,27.4412965228465,29.2680320187378,17.9561193030464,19.9758318732337,12.6415492875513,19.7036372870303,12.685202083051,14.2237905793034,13.598313777767,15.4041220604071,16.6780159764106,13.4344028941827,15.8446126764304,15.0762827026511,14.4056592910956,14.5311736457702,11.9073422820768,13.0949288317687,12.5390993301408,14.4230065281157,12.8063060516926,9.60033906679163,13.4881612681096,15.2599161566285,18.0229556624087,14.5869539643762,15.7383170678518,12.2561741824758,12.8904158604543,12.0865661322817,16.8342681497322,15.659822392391,13.1996006383255,11.0492381655816,12.8597578184352,14.2750892126045,16.2376875659665,13.1001700729429,12.6773921888496,16.6420848899894,13.0148937280514,14.3758058084661
|short_description=p1@Sept6
}}

Revision as of 06:12, 6 August 2015

Short description:p1@Sept6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sept6_5end
Coexpression cluster:MCL_coexpression_mm9:893
Association with transcript: 0bp_to_ENSMUST00000128766_5end
EntrezGene:56526
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sept6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7164.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2153.78
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E658.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F172.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E481.15
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E874.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A273.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A474.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A653.90
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H280.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I992.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A265.77
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I984.87
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A195.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C314.16
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.94
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.86
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F96.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H941.43
adrenal gland, adult.CNhs10508.49-24D710.84
adrenal gland, embryo E14.CNhs11038.406-44C516.83
adrenal gland, embryo E16.CNhs11004.1254-43D616.44
adrenal gland, embryo E17.CNhs11043.1263-45I116.37
adrenal gland, embryo E18.CNhs11026.1262-18F512.96
adrenal gland, neonate N00.CNhs11191.1311-23C112.70
adrenal gland, neonate N25.CNhs11223.1377-27I36.66
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H16.51
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F515.69
bone (os femoris), neonate N16.CNhs11225.1525-43A612.15
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B219.91
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C740.26
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D433.55
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F127.14
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F223.53
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B215.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.82
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C616.66
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D413.26
eyeball, neonate N00.CNhs11207.633-15C611.84
eyeball, neonate N01.CNhs11140.1532-43E712.17
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E256.91
forelimb, embryo E12.CNhs10600.359-14H252.19
forelimb, embryo E13.CNhs10589.384-1E241.52
forelimb, embryo E14.CNhs10577.413-26A835.95
forelimb, embryo E15.CNhs11007.437-20E733.37
forelimb, embryo E17.CNhs10598.1517-43C424.03
forelimb, embryo E18.CNhs11008.1520-43B526.96
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C831.60
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D231.91
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.71
heart, embryo E11.CNhs10586.331-24E915.53
heart, embryo E12.CNhs11015.353-12F528.38
heart, embryo E13.CNhs11013.376-3I941.23
heart, embryo E14.CNhs10597.403-26D444.98
heart, embryo E15.CNhs11017.431-16C847.62
heart, embryo E16.CNhs11021.457-17C648.75
heart, embryo E17.CNhs11025.479-18E545.58
heart, embryo E18.CNhs11030.1283-20G334.61
heart, neonate N00.CNhs11213.639-21E329.66
heart, neonate N03.CNhs11221.1349-25I223.86
heart, neonate N10.CNhs11118.749-24G110.34
heart, neonate N16.CNhs11209.782-15G15.19
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D24.56
hippocampus, adult.CNhs10478.13-16E814.51
hippocampus, neonate N00.CNhs11228.627-43G113.07
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I516.21
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I911.19
kidney, embryo E15.CNhs10997.434-16F814.51
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G77.86
kidney, neonate N10.CNhs11206.758-6D54.43
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B112.75
lung, embryo E12.CNhs10522.354-16G217.43
lung, embryo E14.CNhs10604.404-26F814.34
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A69.38
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E67.81
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C218.78
medulla oblongata, neonate N30.CNhs11200.1396-42A316.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C728.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I710.36
ovary, embryo E18.CNhs11040.505-44H713.00
ovary, neonate N00.CNhs11217.1299-22I411.89
oviduct, adult pregnant day01.CNhs10500.988-6G68.91
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C717.08
pituitary gland, embryo E14.CNhs11037.398-44A518.65
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F619.44
pituitary gland, embryo E17.CNhs11039.1265-44F515.30
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H38.44
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C916.13
spleen, adult.CNhs10465.25-2G229.56
spleen, embryo E16.CNhs11035.461-43C114.65
spleen, embryo E18.CNhs11011.1271-21F214.26
spleen, neonate N10.CNhs11116.752-24D117.52
spleen, neonate N20.CNhs11112.824-19H124.33
spleen, neonate N25.CNhs11099.1354-25G326.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C673.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C977.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D377.94
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E319.93
stomach, embryo E15.CNhs10603.1252-16G812.81
stomach, embryo E16.CNhs11022.459-17D49.50
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G510.69
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G59.29
testis, neonate N00.CNhs11189.1300-22B711.97
testis, neonate N07.CNhs11222.726-26I418.23
testis, neonate N10.CNhs11204.763-44D926.84
testis, neonate N20.CNhs11110.839-18H318.36
testis, neonate N30.CNhs11130.1391-42E218.15
thymus, adult.CNhs10471.38-12B553.72
thymus, embryo E14.CNhs11041.402-44I452.30
thymus, embryo E15.CNhs11005.430-45I252.90
thymus, embryo E16.CNhs11002.456-26C560.80
thymus, embryo E17.CNhs10581.478-18C165.17
thymus, embryo E18.CNhs10595.1273-19G465.56
thymus, neonate N02.CNhs11181.1541-43F857.81
thymus, neonate N03.CNhs11137.2104-43C752.28
thymus, neonate N06.CNhs11197.681-26C449.68
thymus, neonate N07.CNhs11211.713-19D350.98
thymus, neonate N10.CNhs11194.748-24E451.02
thymus, neonate N20.CNhs11186.820-7A257.50
thymus, neonate N25.CNhs11125.1362-25G749.16
thymus, neonate N30.CNhs11132.1393-42G254.93
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I829.27
whole body, embryo E12.CNhs10587.857-27C917.96
whole body, embryo E13.CNhs10512.372-23H219.98
whole body, embryo E14.5.CNhs10578.420-27D212.64
whole body, embryo E14.CNhs10519.395-14B119.70
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.86
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B313.10
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C616.64
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell2.81e-0912
lymphocyte3.42e-0913
common lymphoid progenitor3.42e-0913
T cell1.14e-0811
pro-T cell1.14e-0811
mature alpha-beta T cell2.51e-079
alpha-beta T cell2.51e-079
immature T cell2.51e-079
mature T cell2.51e-079
immature alpha-beta T cell2.51e-079
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