FFCP PHASE1:Mm9::chr16:25684232..25684285,+: Difference between revisions
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{{FFCP|EntrezGene=22061|HGNC=|MCL_coexpression_id=14|UniProt=O88898,Q5CZX0,Q569E5,D3Z7K2|association_with_transcript=381bp_to_ENSMUST00000065523,ENSMUST00000115308,ENSMUST00000115310,NM_001127259,NM_001127260,NM_001127261,uc007yun.2,uc007yuo.2,uc007yup.2,uc007yuq.2_5end|description=CAGE_peak_2_at_Trp63_5end|id=chr16:25684232..25684285,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.31e-10!23;UBERON:0000026!4.34e-08!13;UBERON:0004708!4.34e-08!13;UBERON:0002101!4.34e-08!13;UBERON:0004357!4.34e-08!13;UBERON:0009872!4.34e-08!13;UBERON:0004347!4.34e-08!13;UBERON:0005732!4.34e-08!13;UBERON:0005733!4.34e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.84e-14,22;UBERON:0000026,1.05e-10,12;UBERON:0004708,1.05e-10,12;UBERON:0002101,1.05e-10,12;UBERON:0004357,1.05e-10,12;UBERON:0004347,1.05e-10,12;UBERON:0005732,1.05e-10,12;UBERON:0005733,1.05e-10,12;UBERON:0010707,1.19e-09,13;UBERON:0005418,1.61e-07,5;UBERON:0002472,1.61e-07,5;UBERON:0008784,1.61e-07,5;UBERON:0006058,1.61e-07,5;UBERON:0004709,1.61e-07,5;UBERON:0002529,1.61e-07,5;UBERON:0010538,1.61e-07,5;UBERON:0005420,1.61e-07,5;UBERON:0010758,1.61e-07,5;UBERON:0000978,1.61e-07,5;UBERON:0002103,1.61e-07,5;UBERON:0000376,1.61e-07,5;UBERON:0000154,1.61e-07,5;UBERON:0010709,1.61e-07,5;UBERON:0005730,1.61e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.510749352340751,0.768032666281217,0,0,0,0.558365998002762,0.56276261003168,1.37518422999129,0,0.142371680799103,0,0,0,0,0,0,0,0,0,4.91555470461132,1.53387290320252,0.779358013808606,0.35333957451034,0,32.0816193535795,7.64415719119937,0,0,0,0,0.11418387971906,0.258937883647172,0,0.520455980298408,0.608930956624282,0,0,0.587943535678524,0,0,0.433798070759735,3.5384422077995,6.30890714794896,8.39197770149496,5.81850303762267,0,0.292780797011547,0,0,0,0,0,1.19832511523858,0,0,0.347648640384553,0,0.83115217823824,0.648965052271031,0,2.23932547098167,0,1.47309299120532,0.650602214813519,0,0.360124259610698,0.753524089178575,0.680364991513279,0.512454881139399,0.562210347358373,2.84573707812917,0.431135985865684,3.9712276835242,2.81521798662318,2.84954452155847,2.22437799380478,2.78601733217733,1.64625709126355,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,1.28441876603886,0.658239399653922,1.14917224855367,1.94565142910054,0.438599962275997,0.439100230582101,0.536825675041487,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0,0.184753190166605,0.757965647081939,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.491589944147214,1.20879487306127,0,0,0,0.491764273019036,0.827810238914197,2.0871576698413,1.17211686592203,0,36.1033425902253,0,0,0,0,0,0,0,0,0,0.642642632843614,0.283880170416537,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,1.42598951353889,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0.220528398054962,6.10079135883476,4.19807509409354,3.37752379597673,1.67121281604391,1.64140899745061,0,4.63563255026274,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,1.12738587736838,0,0,0.194451188344048,0,0,0.117357238645754,0,0,2.89900944991207,5.47257011889944,0.316011120628178,0,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0.201652370273681,0.38983152295901,0,0,26.0739941157493,0,0,0,0,0,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.19707462020309,3.41467211508268,3.8897074730927,1.67690530102386,1.2869045591501,5.778414922842,4.32673620201678,5.45562656306086,3.79045817645696,6.08350319736575,3.39527414494937,4.30750934361459,4.1616349063165,3.56099907524802,4.28664322154766,2.54945517078682,4.05109362973781,2.47251540481984,5.00476328456951,3.77156177623957,3.72699192934609,6.91464950847231,5.66851024866081,4.51725025993587,3.72304274723377,4.39027134894654,4.47218509444333,3.80251518768413,3.92799590160417,3.6776855618494,2.46261205938909,3.6830793885272,3.56354734727722,2.3148793317737,3.99696924700713,3.74290573512653,5.15690529715916,5.16478496585877,8.6030653456611,8.57910991795559|short_description=p2@Trp63}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22061 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88898,uniprot:Q5CZX0,uniprot:Q569E5,uniprot:D3Z7K2 | |||
|association_with_transcript=381bp_to_ENSMUST00000065523,ENSMUST00000115308,ENSMUST00000115310,NM_001127259,NM_001127260,NM_001127261,uc007yun.2,uc007yuo.2,uc007yup.2,uc007yuq.2_5end | |||
|cluster_id=chr16:25684232..25684285,+ | |||
|description=CAGE_peak_2_at_Trp63_5end | |||
|id=chr16:25684232..25684285,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.31e-10!23;UBERON:0000026!4.34e-08!13;UBERON:0004708!4.34e-08!13;UBERON:0002101!4.34e-08!13;UBERON:0004357!4.34e-08!13;UBERON:0009872!4.34e-08!13;UBERON:0004347!4.34e-08!13;UBERON:0005732!4.34e-08!13;UBERON:0005733!4.34e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.84e-14,22;UBERON:0000026,1.05e-10,12;UBERON:0004708,1.05e-10,12;UBERON:0002101,1.05e-10,12;UBERON:0004357,1.05e-10,12;UBERON:0004347,1.05e-10,12;UBERON:0005732,1.05e-10,12;UBERON:0005733,1.05e-10,12;UBERON:0010707,1.19e-09,13;UBERON:0005418,1.61e-07,5;UBERON:0002472,1.61e-07,5;UBERON:0008784,1.61e-07,5;UBERON:0006058,1.61e-07,5;UBERON:0004709,1.61e-07,5;UBERON:0002529,1.61e-07,5;UBERON:0010538,1.61e-07,5;UBERON:0005420,1.61e-07,5;UBERON:0010758,1.61e-07,5;UBERON:0000978,1.61e-07,5;UBERON:0002103,1.61e-07,5;UBERON:0000376,1.61e-07,5;UBERON:0000154,1.61e-07,5;UBERON:0010709,1.61e-07,5;UBERON:0005730,1.61e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.510749352340751,0.768032666281217,0,0,0,0.558365998002762,0.56276261003168,1.37518422999129,0,0.142371680799103,0,0,0,0,0,0,0,0,0,4.91555470461132,1.53387290320252,0.779358013808606,0.35333957451034,0,32.0816193535795,7.64415719119937,0,0,0,0,0.11418387971906,0.258937883647172,0,0.520455980298408,0.608930956624282,0,0,0.587943535678524,0,0,0.433798070759735,3.5384422077995,6.30890714794896,8.39197770149496,5.81850303762267,0,0.292780797011547,0,0,0,0,0,1.19832511523858,0,0,0.347648640384553,0,0.83115217823824,0.648965052271031,0,2.23932547098167,0,1.47309299120532,0.650602214813519,0,0.360124259610698,0.753524089178575,0.680364991513279,0.512454881139399,0.562210347358373,2.84573707812917,0.431135985865684,3.9712276835242,2.81521798662318,2.84954452155847,2.22437799380478,2.78601733217733,1.64625709126355,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0.536546802799238,1.28441876603886,0.658239399653922,1.14917224855367,1.94565142910054,0.438599962275997,0.439100230582101,0.536825675041487,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0,0.184753190166605,0.757965647081939,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,0.491589944147214,1.20879487306127,0,0,0,0.491764273019036,0.827810238914197,2.0871576698413,1.17211686592203,0,36.1033425902253,0,0,0,0,0,0,0,0,0,0.642642632843614,0.283880170416537,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,1.42598951353889,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0.220528398054962,6.10079135883476,4.19807509409354,3.37752379597673,1.67121281604391,1.64140899745061,0,4.63563255026274,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,1.12738587736838,0,0,0.194451188344048,0,0,0.117357238645754,0,0,2.89900944991207,5.47257011889944,0.316011120628178,0,0.410843828659309,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0.201652370273681,0.38983152295901,0,0,26.0739941157493,0,0,0,0,0,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.19707462020309,3.41467211508268,3.8897074730927,1.67690530102386,1.2869045591501,5.778414922842,4.32673620201678,5.45562656306086,3.79045817645696,6.08350319736575,3.39527414494937,4.30750934361459,4.1616349063165,3.56099907524802,4.28664322154766,2.54945517078682,4.05109362973781,2.47251540481984,5.00476328456951,3.77156177623957,3.72699192934609,6.91464950847231,5.66851024866081,4.51725025993587,3.72304274723377,4.39027134894654,4.47218509444333,3.80251518768413,3.92799590160417,3.6776855618494,2.46261205938909,3.6830793885272,3.56354734727722,2.3148793317737,3.99696924700713,3.74290573512653,5.15690529715916,5.16478496585877,8.6030653456611,8.57910991795559 | |||
|short_description=p2@Trp63 | |||
}} |
Revision as of 06:13, 6 August 2015
Short description: | p2@Trp63 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trp63_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 381bp_to_ENSMUST00000065523, ENSMUST00000115308, ENSMUST00000115310, NM_001127259, NM_001127260, NM_001127261, uc007yun.2, uc007yuo.2, uc007yup.2, uc007yuq.2_5end |
EntrezGene: | 22061 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 5.84e-14 | 22 |
appendage | 1.05e-10 | 12 |
paired limb/fin | 1.05e-10 | 12 |
limb | 1.05e-10 | 12 |
paired limb/fin bud | 1.05e-10 | 12 |
limb bud | 1.05e-10 | 12 |
limb/fin field | 1.05e-10 | 12 |
limb field | 1.05e-10 | 12 |
appendage girdle complex | 1.19e-09 | 13 |
hindlimb bud | 1.61e-07 | 5 |
stylopod | 1.61e-07 | 5 |
lower limb segment | 1.61e-07 | 5 |
multi-limb segment region | 1.61e-07 | 5 |
pelvic appendage | 1.61e-07 | 5 |
limb segment | 1.61e-07 | 5 |
paired limb/fin segment | 1.61e-07 | 5 |
pelvic appendage bud | 1.61e-07 | 5 |
subdivision of organism along appendicular axis | 1.61e-07 | 5 |
leg | 1.61e-07 | 5 |
hindlimb | 1.61e-07 | 5 |
hindlimb stylopod | 1.61e-07 | 5 |
posterior region of body | 1.61e-07 | 5 |
pelvic complex | 1.61e-07 | 5 |
hindlimb/pelvic fin field | 1.61e-07 | 5 |