FFCP PHASE1:Mm9::chr6:87801005..87801048,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12785|HGNC=|MCL_coexpression_id=101|UniProt=|association_with_transcript=0bp_to_ENSMUST00000141961_5end|description=CAGE_peak_1_at_Cnbp_5end|id=chr6:87801005..87801048,-|ontology_enrichment_celltype=CL:0000542!3.92e-09!13;CL:0000051!3.92e-09!13;CL:0000838!8.39e-09!12;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000988!2.55e-07!32;CL:0002032!2.55e-07!32;CL:0000037!2.55e-07!32;CL:0000566!2.55e-07!32;CL:0000837!2.55e-07!32;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9|ontology_enrichment_celltype_v019_2=CL:0000542,3.92e-09,13;CL:0000051,3.92e-09,13;CL:0000838,8.39e-09,12;CL:0000084,3.63e-08,11;CL:0000827,3.63e-08,11;CL:0000988,2.55e-07,32;CL:0002032,2.55e-07,32;CL:0000037,2.55e-07,32;CL:0000837,2.55e-07,32;CL:0000791,4.95e-07,9;CL:0000789,4.95e-07,9;CL:0002420,4.95e-07,9;CL:0002419,4.95e-07,9;CL:0000790,4.95e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!2.19e-11!147;UBERON:0000926!9.82e-11!193;UBERON:0004120!9.82e-11!193;UBERON:0006603!9.82e-11!193;UBERON:0005057!3.05e-10!51;UBERON:0002530!5.43e-10!65;UBERON:0001041!8.47e-10!92;UBERON:0000949!9.13e-10!72;UBERON:0002368!1.10e-09!60;UBERON:0000077!1.45e-09!97;UBERON:0003104!8.30e-09!131;UBERON:0009142!8.30e-09!131;UBERON:0002405!5.70e-08!70;UBERON:0002107!1.45e-07!22;UBERON:0007499!1.45e-07!22;UBERON:0006925!1.45e-07!22;UBERON:0009497!1.45e-07!22;UBERON:0000015!1.45e-07!22;UBERON:0002423!1.45e-07!22;UBERON:0006235!1.45e-07!22;UBERON:0008835!1.45e-07!22;UBERON:0003894!1.45e-07!22;UBERON:0004161!1.45e-07!22;UBERON:0008836!1.45e-07!22;UBERON:0003929!1.50e-07!55;UBERON:0002365!2.40e-07!25;UBERON:0002330!2.40e-07!25;UBERON:0009854!6.95e-07!23;UBERON:0009856!6.95e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001048,9.71e-11,134;UBERON:0002530,5.43e-10,65;UBERON:0000949,9.13e-10,72;UBERON:0002368,1.10e-09,60;UBERON:0001041,1.79e-09,80;UBERON:0002107,1.45e-07,22;UBERON:0007499,1.45e-07,22;UBERON:0006925,1.45e-07,22;UBERON:0009497,1.45e-07,22;UBERON:0000015,1.45e-07,22;UBERON:0002423,1.45e-07,22;UBERON:0006235,1.45e-07,22;UBERON:0008835,1.45e-07,22;UBERON:0003894,1.45e-07,22;UBERON:0004161,1.45e-07,22;UBERON:0008836,1.45e-07,22;UBERON:0003929,1.50e-07,55;UBERON:0002365,2.40e-07,25;UBERON:0002330,2.40e-07,25;UBERON:0009854,6.95e-07,23;UBERON:0009856,6.95e-07,23|phase1_expression=332.308857742447,113.417007482792,93.7298433142444,76.523445460628,100.680041719216,165.361082833211,185.722049273443,444.313355962464,955.251479799059,1040.41681950126,815.853618594531,764.77568828829,404.71852555737,448.291823604619,263.822931358005,337.12132020406,346.982691551561,341.645525082971,341.963397412712,323.809304321897,166.344675535492,405.404953753215,453.442833945192,195.190755807956,228.491643942901,115.420624787119,177.904704413698,180.349421758089,250.260843424044,214.225610295941,224.834737804479,180.983741935995,146.385419445128,190.178017218526,328.424291657199,347.596643444607,321.770905469494,140.626627927601,194.552500786426,202.080165173886,128.234464390761,159.832643480276,162.160457912405,239.078057335621,238.235788365859,193.641823530574,45.3786979721863,61.9191444120468,74.2539297642515,98.9648186288102,91.6911061646124,35.9381410912429,570.628643202361,438.844095916863,396.92677678725,211.209996985512,144.699387169072,171.718806728388,81.3312172655583,74.0587370980846,57.6786577190623,88.4384228700435,67.5864045044466,56.6936821887281,59.3319817540185,61.8117700003107,32.3568119359877,41.8797952800494,154.497522339632,127.580611723448,158.164370936239,94.550475837659,119.710749195775,159.605511377085,134.662886780622,92.8410974476121,139.847168869224,148.372686854988,139.935551796438,77.549137185354,87.096236709494,106.787240964136,159.971858427791,202.594539611405,180.149134128859,105.477033599573,128.846371123188,117.80444976159,368.938013919273,207.82179029366,258.848988410598,492.162457633353,413.422570894312,318.96458625795,280.053635919945,281.808911984224,308.135057769064,280.698741286061,249.654350423357,238.50421279448,309.855523508697,121.910153543602,89.181833897326,78.2173373468664,242.46996593256,249.306107627497,240.629635827037,270.729978813891,240.81223179187,281.149411388778,282.260626648503,246.921502911147,276.277365712758,319.381275331007,278.68523591162,295.442156216067,178.721961671952,284.137736347626,244.152512338165,330.813208142452,325.962081247541,270.560391249454,201.303102115572,221.635063337741,204.629432556746,225.313122693978,476.265119911033,639.496311238973,485.53533764618,214.050823709492,237.442812862867,229.067883901752,217.280400240346,240.372529890511,193.86624557407,221.297082824421,288.307239060245,246.947836661035,253.986372225843,269.1551336788,314.240869754929,340.94482087484,269.372946188802,275.186997368016,273.166544092581,288.255870640912,249.527692502558,231.28081344068,298.561670211986,243.568631256151,215.540127100837,277.50179725331,239.39868158324,282.084254882955,290.1528123352,264.317506334959,680.444578506525,492.30654631045,445.284203552894,234.466374510188,273.222859877977,262.890609733082,247.398248686545,257.367615125604,233.714676024378,265.321230960215,231.251672006472,298.218684405751,286.334138849456,318.156545385287,288.92923722143,337.137171002816,311.980713828583,364.50463335317,223.117635426539,213.012547625119,172.478604717543,172.157318897967,320.785528804992,257.085995749505,249.100802735606,203.095309295706,187.687069005071,195.932394895936,201.200322094873,254.624584003321,217.153620403433,253.072632436344,201.982794255408,181.561520548153,215.92191182482,228.415040422759,325.470118035488,261.743342388889,217.525929849045,243.770639430841,193.176677218955,238.602059266864,191.227288263754,196.321496812871,197.661398352291,231.493079517298,425.409519870059,306.661304306181,318.229013088276,303.788713831937,276.701205573918,310.153827441608,340.944015535321,264.392750317295,281.466753681461,356.655275731318,242.968269031229,351.301054599067,305.17284430604,403.873625837432,388.39540027494,383.060155962514,293.388065984568,342.979455304577,303.114856182168,261.916667351115,209.109011225055,207.372746712968,194.481654603873,204.304929307115,209.339471373022,234.752571027701,213.031570926403,263.00062011876,259.372842762575,256.896728040765,116.10928863324,109.325042447561,238.997436687252,275.108936065818,218.509352973385,208.988437193898,407.542274206415,674.602317490085,237.577689220441,226.064032947754,196.681562130045,222.957888489731,203.415189437226,158.805933772535,213.335239782669,196.980448232224,183.01824118924,215.927924635454,236.046361701351,202.460591369669,310.299657568562,204.397982362971,207.082415810342,278.712170305919,320.462970382636,246.318234161203,196.080456872833,253.326561905796,253.259727304857,315.547277186475,313.717692978555,309.083949261228,264.600707523247,196.988887604037,256.691462738356,288.63793373219,214.60605639559,233.627368184436,241.892078688061,208.869885412025,250.114511315224,185.114689061676,238.895798808857,183.022909226341,282.055821112296,237.765976741614,344.080693288975,281.118543090134,281.718731847402,252.776985607394,200.538815601337,203.411556305529,239.902716640185,233.836321402331,244.27158160065,304.215058062576,268.604157471814,291.234614491903,706.940290344444,672.746631319824,664.603674025474,250.12370191996,288.972930136367,266.551821403299,262.560983537799,251.533220105406,241.508995503272,284.968363911126,250.026703569141,300.495821397666,245.490759414656,269.661261879726,254.789208285254,210.369780283878,281.279433777066,221.868805900558,218.667581147799,218.122358008595,254.313136145349,251.294462748824,213.808203284024,277.580154829081,283.42152615774,303.054664682423,310.169579393951,317.376857639316,331.038256947422,264.42242950087,281.928842434615,281.497742775767,303.206599289407,292.297872599887,289.281038062379,285.741408677806,232.047214041351,264.774988194187,244.857110070387,406.300847438459,355.621497305252,442.379026941325,372.032309862798,247.282680361204,194.626727042876,239.562324541583,276.106472253837,266.836359346813,204.440167027378,200.701803117129,203.950802784425,128.889886757766,186.342445377615,183.560717065697,203.181772569774,205.346468670245,210.711220177655,198.819959712699,285.51899320407,258.967142837269,278.125043773485,217.823618493191,297.860304094363,229.804385562518,264.029112628319,236.322210653012,243.256760870596,232.734132034457,217.992197905606,238.235069170614,201.422882567717,211.731179002903,232.096730049633,203.853699869156,235.361065994002,232.841429099692,233.240619854672,257.156513474792,214.293282740885,241.899523795177,231.521540438849,228.193874112756,246.378357927336,245.80543592532,272.196823634686,274.907848452546,240.373281507175,265.42029449411,241.778166937067,232.569082888705,267.637102232977,242.631093297223,259.266485158654,197.600167148915,282.121519785163,285.133888722092,320.981821211519,316.769277855624,383.045664444936|short_description=p1@Cnbp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12785 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000141961_5end | |||
|cluster_id=chr6:87801005..87801048,- | |||
|description=CAGE_peak_1_at_Cnbp_5end | |||
|id=chr6:87801005..87801048,- | |||
|ontology_enrichment_celltype=CL:0000542!3.92e-09!13;CL:0000051!3.92e-09!13;CL:0000838!8.39e-09!12;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000988!2.55e-07!32;CL:0002032!2.55e-07!32;CL:0000037!2.55e-07!32;CL:0000566!2.55e-07!32;CL:0000837!2.55e-07!32;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.92e-09,13;CL:0000051,3.92e-09,13;CL:0000838,8.39e-09,12;CL:0000084,3.63e-08,11;CL:0000827,3.63e-08,11;CL:0000988,2.55e-07,32;CL:0002032,2.55e-07,32;CL:0000037,2.55e-07,32;CL:0000837,2.55e-07,32;CL:0000791,4.95e-07,9;CL:0000789,4.95e-07,9;CL:0002420,4.95e-07,9;CL:0002419,4.95e-07,9;CL:0000790,4.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!2.19e-11!147;UBERON:0000926!9.82e-11!193;UBERON:0004120!9.82e-11!193;UBERON:0006603!9.82e-11!193;UBERON:0005057!3.05e-10!51;UBERON:0002530!5.43e-10!65;UBERON:0001041!8.47e-10!92;UBERON:0000949!9.13e-10!72;UBERON:0002368!1.10e-09!60;UBERON:0000077!1.45e-09!97;UBERON:0003104!8.30e-09!131;UBERON:0009142!8.30e-09!131;UBERON:0002405!5.70e-08!70;UBERON:0002107!1.45e-07!22;UBERON:0007499!1.45e-07!22;UBERON:0006925!1.45e-07!22;UBERON:0009497!1.45e-07!22;UBERON:0000015!1.45e-07!22;UBERON:0002423!1.45e-07!22;UBERON:0006235!1.45e-07!22;UBERON:0008835!1.45e-07!22;UBERON:0003894!1.45e-07!22;UBERON:0004161!1.45e-07!22;UBERON:0008836!1.45e-07!22;UBERON:0003929!1.50e-07!55;UBERON:0002365!2.40e-07!25;UBERON:0002330!2.40e-07!25;UBERON:0009854!6.95e-07!23;UBERON:0009856!6.95e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,9.71e-11,134;UBERON:0002530,5.43e-10,65;UBERON:0000949,9.13e-10,72;UBERON:0002368,1.10e-09,60;UBERON:0001041,1.79e-09,80;UBERON:0002107,1.45e-07,22;UBERON:0007499,1.45e-07,22;UBERON:0006925,1.45e-07,22;UBERON:0009497,1.45e-07,22;UBERON:0000015,1.45e-07,22;UBERON:0002423,1.45e-07,22;UBERON:0006235,1.45e-07,22;UBERON:0008835,1.45e-07,22;UBERON:0003894,1.45e-07,22;UBERON:0004161,1.45e-07,22;UBERON:0008836,1.45e-07,22;UBERON:0003929,1.50e-07,55;UBERON:0002365,2.40e-07,25;UBERON:0002330,2.40e-07,25;UBERON:0009854,6.95e-07,23;UBERON:0009856,6.95e-07,23 | |||
|phase1_expression=332.308857742447,113.417007482792,93.7298433142444,76.523445460628,100.680041719216,165.361082833211,185.722049273443,444.313355962464,955.251479799059,1040.41681950126,815.853618594531,764.77568828829,404.71852555737,448.291823604619,263.822931358005,337.12132020406,346.982691551561,341.645525082971,341.963397412712,323.809304321897,166.344675535492,405.404953753215,453.442833945192,195.190755807956,228.491643942901,115.420624787119,177.904704413698,180.349421758089,250.260843424044,214.225610295941,224.834737804479,180.983741935995,146.385419445128,190.178017218526,328.424291657199,347.596643444607,321.770905469494,140.626627927601,194.552500786426,202.080165173886,128.234464390761,159.832643480276,162.160457912405,239.078057335621,238.235788365859,193.641823530574,45.3786979721863,61.9191444120468,74.2539297642515,98.9648186288102,91.6911061646124,35.9381410912429,570.628643202361,438.844095916863,396.92677678725,211.209996985512,144.699387169072,171.718806728388,81.3312172655583,74.0587370980846,57.6786577190623,88.4384228700435,67.5864045044466,56.6936821887281,59.3319817540185,61.8117700003107,32.3568119359877,41.8797952800494,154.497522339632,127.580611723448,158.164370936239,94.550475837659,119.710749195775,159.605511377085,134.662886780622,92.8410974476121,139.847168869224,148.372686854988,139.935551796438,77.549137185354,87.096236709494,106.787240964136,159.971858427791,202.594539611405,180.149134128859,105.477033599573,128.846371123188,117.80444976159,368.938013919273,207.82179029366,258.848988410598,492.162457633353,413.422570894312,318.96458625795,280.053635919945,281.808911984224,308.135057769064,280.698741286061,249.654350423357,238.50421279448,309.855523508697,121.910153543602,89.181833897326,78.2173373468664,242.46996593256,249.306107627497,240.629635827037,270.729978813891,240.81223179187,281.149411388778,282.260626648503,246.921502911147,276.277365712758,319.381275331007,278.68523591162,295.442156216067,178.721961671952,284.137736347626,244.152512338165,330.813208142452,325.962081247541,270.560391249454,201.303102115572,221.635063337741,204.629432556746,225.313122693978,476.265119911033,639.496311238973,485.53533764618,214.050823709492,237.442812862867,229.067883901752,217.280400240346,240.372529890511,193.86624557407,221.297082824421,288.307239060245,246.947836661035,253.986372225843,269.1551336788,314.240869754929,340.94482087484,269.372946188802,275.186997368016,273.166544092581,288.255870640912,249.527692502558,231.28081344068,298.561670211986,243.568631256151,215.540127100837,277.50179725331,239.39868158324,282.084254882955,290.1528123352,264.317506334959,680.444578506525,492.30654631045,445.284203552894,234.466374510188,273.222859877977,262.890609733082,247.398248686545,257.367615125604,233.714676024378,265.321230960215,231.251672006472,298.218684405751,286.334138849456,318.156545385287,288.92923722143,337.137171002816,311.980713828583,364.50463335317,223.117635426539,213.012547625119,172.478604717543,172.157318897967,320.785528804992,257.085995749505,249.100802735606,203.095309295706,187.687069005071,195.932394895936,201.200322094873,254.624584003321,217.153620403433,253.072632436344,201.982794255408,181.561520548153,215.92191182482,228.415040422759,325.470118035488,261.743342388889,217.525929849045,243.770639430841,193.176677218955,238.602059266864,191.227288263754,196.321496812871,197.661398352291,231.493079517298,425.409519870059,306.661304306181,318.229013088276,303.788713831937,276.701205573918,310.153827441608,340.944015535321,264.392750317295,281.466753681461,356.655275731318,242.968269031229,351.301054599067,305.17284430604,403.873625837432,388.39540027494,383.060155962514,293.388065984568,342.979455304577,303.114856182168,261.916667351115,209.109011225055,207.372746712968,194.481654603873,204.304929307115,209.339471373022,234.752571027701,213.031570926403,263.00062011876,259.372842762575,256.896728040765,116.10928863324,109.325042447561,238.997436687252,275.108936065818,218.509352973385,208.988437193898,407.542274206415,674.602317490085,237.577689220441,226.064032947754,196.681562130045,222.957888489731,203.415189437226,158.805933772535,213.335239782669,196.980448232224,183.01824118924,215.927924635454,236.046361701351,202.460591369669,310.299657568562,204.397982362971,207.082415810342,278.712170305919,320.462970382636,246.318234161203,196.080456872833,253.326561905796,253.259727304857,315.547277186475,313.717692978555,309.083949261228,264.600707523247,196.988887604037,256.691462738356,288.63793373219,214.60605639559,233.627368184436,241.892078688061,208.869885412025,250.114511315224,185.114689061676,238.895798808857,183.022909226341,282.055821112296,237.765976741614,344.080693288975,281.118543090134,281.718731847402,252.776985607394,200.538815601337,203.411556305529,239.902716640185,233.836321402331,244.27158160065,304.215058062576,268.604157471814,291.234614491903,706.940290344444,672.746631319824,664.603674025474,250.12370191996,288.972930136367,266.551821403299,262.560983537799,251.533220105406,241.508995503272,284.968363911126,250.026703569141,300.495821397666,245.490759414656,269.661261879726,254.789208285254,210.369780283878,281.279433777066,221.868805900558,218.667581147799,218.122358008595,254.313136145349,251.294462748824,213.808203284024,277.580154829081,283.42152615774,303.054664682423,310.169579393951,317.376857639316,331.038256947422,264.42242950087,281.928842434615,281.497742775767,303.206599289407,292.297872599887,289.281038062379,285.741408677806,232.047214041351,264.774988194187,244.857110070387,406.300847438459,355.621497305252,442.379026941325,372.032309862798,247.282680361204,194.626727042876,239.562324541583,276.106472253837,266.836359346813,204.440167027378,200.701803117129,203.950802784425,128.889886757766,186.342445377615,183.560717065697,203.181772569774,205.346468670245,210.711220177655,198.819959712699,285.51899320407,258.967142837269,278.125043773485,217.823618493191,297.860304094363,229.804385562518,264.029112628319,236.322210653012,243.256760870596,232.734132034457,217.992197905606,238.235069170614,201.422882567717,211.731179002903,232.096730049633,203.853699869156,235.361065994002,232.841429099692,233.240619854672,257.156513474792,214.293282740885,241.899523795177,231.521540438849,228.193874112756,246.378357927336,245.80543592532,272.196823634686,274.907848452546,240.373281507175,265.42029449411,241.778166937067,232.569082888705,267.637102232977,242.631093297223,259.266485158654,197.600167148915,282.121519785163,285.133888722092,320.981821211519,316.769277855624,383.045664444936 | |||
|short_description=p1@Cnbp | |||
}} |
Revision as of 06:37, 6 August 2015
Short description: | p1@Cnbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cnbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000141961_5end |
EntrezGene: | 12785 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.92e-09 | 13 |
common lymphoid progenitor | 3.92e-09 | 13 |
lymphoid lineage restricted progenitor cell | 8.39e-09 | 12 |
T cell | 3.63e-08 | 11 |
pro-T cell | 3.63e-08 | 11 |
hematopoietic cell | 2.55e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.55e-07 | 32 |
hematopoietic stem cell | 2.55e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.55e-07 | 32 |
mature alpha-beta T cell | 4.95e-07 | 9 |
alpha-beta T cell | 4.95e-07 | 9 |
immature T cell | 4.95e-07 | 9 |
mature T cell | 4.95e-07 | 9 |
immature alpha-beta T cell | 4.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primordium | 9.71e-11 | 134 |
gland | 5.43e-10 | 65 |
endocrine system | 9.13e-10 | 72 |
endocrine gland | 1.10e-09 | 60 |
foregut | 1.79e-09 | 80 |
liver | 1.45e-07 | 22 |
epithelial sac | 1.45e-07 | 22 |
digestive gland | 1.45e-07 | 22 |
epithelium of foregut-midgut junction | 1.45e-07 | 22 |
anatomical boundary | 1.45e-07 | 22 |
hepatobiliary system | 1.45e-07 | 22 |
foregut-midgut junction | 1.45e-07 | 22 |
hepatic diverticulum | 1.45e-07 | 22 |
liver primordium | 1.45e-07 | 22 |
septum transversum | 1.45e-07 | 22 |
liver bud | 1.45e-07 | 22 |
gut epithelium | 1.50e-07 | 55 |
exocrine gland | 2.40e-07 | 25 |
exocrine system | 2.40e-07 | 25 |
digestive tract diverticulum | 6.95e-07 | 23 |
sac | 6.95e-07 | 23 |