FFCP PHASE1:Mm9::chr11:62364442..62364482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=385 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_ENSMUST00000142533_5end | |association_with_transcript=60bp_to_ENSMUST00000142533_5end | ||
|cluster_id=chr11:62364442..62364482,- | |||
|description=CAGE_peak_2_at_ENSMUST00000142533_5end | |description=CAGE_peak_2_at_ENSMUST00000142533_5end | ||
|id=chr11:62364442..62364482,- | |id=chr11:62364442..62364482,- | ||
|ontology_enrichment_celltype=CL:0002319!3.68e-11!43;CL:0000221!4.51e-11!44;CL:0000133!4.51e-11!44;CL:0000540!1.58e-10!33;CL:0000047!1.58e-10!33;CL:0000031!1.58e-10!33;CL:0000404!1.58e-10!33;CL:0000117!3.09e-10!23;CL:0000337!3.09e-10!23;CL:0000055!6.92e-08!50;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39 | |ontology_enrichment_celltype=CL:0002319!3.68e-11!43;CL:0000221!4.51e-11!44;CL:0000133!4.51e-11!44;CL:0000540!1.58e-10!33;CL:0000047!1.58e-10!33;CL:0000031!1.58e-10!33;CL:0000404!1.58e-10!33;CL:0000117!3.09e-10!23;CL:0000337!3.09e-10!23;CL:0000055!6.92e-08!50;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-12,23;CL:0000337,1.59e-12,23;CL:0000540,6.84e-11,33;CL:0000047,6.84e-11,33;CL:0000031,6.84e-11,33;CL:0000404,6.84e-11,33;CL:0002319,2.90e-10,43;CL:0000221,9.01e-10,44;CL:0000133,9.01e-10,44;CL:0000393,9.82e-08,39;CL:0000211,9.82e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.91e-21!73;UBERON:0005743!3.91e-21!73;UBERON:0000073!1.64e-20!75;UBERON:0001016!1.64e-20!75;UBERON:0004121!1.99e-17!102;UBERON:0000924!1.99e-17!102;UBERON:0006601!1.99e-17!102;UBERON:0000033!2.81e-17!63;UBERON:0002346!1.34e-16!71;UBERON:0003075!1.34e-16!71;UBERON:0007284!1.34e-16!71;UBERON:0003056!8.45e-16!49;UBERON:0001049!1.53e-15!52;UBERON:0005068!1.53e-15!52;UBERON:0006241!1.53e-15!52;UBERON:0007135!1.53e-15!52;UBERON:0000955!3.66e-15!50;UBERON:0006238!3.66e-15!50;UBERON:0007811!1.18e-14!86;UBERON:0002616!1.20e-14!49;UBERON:0000153!5.27e-14!94;UBERON:0003080!3.53e-13!40;UBERON:0002780!6.32e-13!39;UBERON:0001890!6.32e-13!39;UBERON:0006240!6.32e-13!39;UBERON:0002020!5.89e-11!34;UBERON:0002791!2.37e-09!29;UBERON:0003528!2.37e-09!29;UBERON:0001893!2.37e-09!29;UBERON:0000956!6.78e-07!21;UBERON:0001869!6.78e-07!21;UBERON:0000203!6.78e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.91e-22,73;UBERON:0001016,1.23e-20,75;UBERON:0002346,3.10e-20,64;UBERON:0003075,3.10e-20,64;UBERON:0007284,3.10e-20,64;UBERON:0004121,1.13e-18,95;UBERON:0000924,1.13e-18,95;UBERON:0006601,1.13e-18,95;UBERON:0000073,1.93e-18,54;UBERON:0001049,2.40e-17,52;UBERON:0005068,2.40e-17,52;UBERON:0006241,2.40e-17,52;UBERON:0007135,2.40e-17,52;UBERON:0003056,3.77e-17,49;UBERON:0010371,5.07e-16,73;UBERON:0000955,1.22e-15,47;UBERON:0006238,1.22e-15,47;UBERON:0002616,5.31e-15,46;UBERON:0003080,9.79e-15,40;UBERON:0002780,2.10e-14,39;UBERON:0001890,2.10e-14,39;UBERON:0006240,2.10e-14,39;UBERON:0002020,6.77e-12,34;UBERON:0003528,7.65e-10,29;UBERON:0002791,7.65e-10,29;UBERON:0001893,7.65e-10,29;UBERON:0010314,6.29e-09,92;UBERON:0000956,4.89e-07,21;UBERON:0001869,4.89e-07,21;UBERON:0000203,4.89e-07,21 | |||
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| ||
|short_description=p2@ENSMUST00000142533 | |short_description=p2@ENSMUST00000142533 | ||
}} | }} |
Latest revision as of 06:42, 6 August 2015
Short description: | p2@ENSMUST00000142533 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000142533_5end |
Coexpression cluster: | MCL_coexpression_mm9:385 |
Association with transcript: | 60bp_to_ENSMUST00000142533_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.59e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-12 | 23 |
neuron | 6.84e-11 | 33 |
neuronal stem cell | 6.84e-11 | 33 |
neuroblast | 6.84e-11 | 33 |
electrically signaling cell | 6.84e-11 | 33 |
neural cell | 2.90e-10 | 43 |
ectodermal cell | 9.01e-10 | 44 |
neurectodermal cell | 9.01e-10 | 44 |
electrically responsive cell | 9.82e-08 | 39 |
electrically active cell | 9.82e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.91e-22 | 73 |
nervous system | 1.23e-20 | 75 |
neurectoderm | 3.10e-20 | 64 |
neural plate | 3.10e-20 | 64 |
presumptive neural plate | 3.10e-20 | 64 |
ectoderm-derived structure | 1.13e-18 | 95 |
ectoderm | 1.13e-18 | 95 |
presumptive ectoderm | 1.13e-18 | 95 |
regional part of nervous system | 1.93e-18 | 54 |
neural tube | 2.40e-17 | 52 |
neural rod | 2.40e-17 | 52 |
future spinal cord | 2.40e-17 | 52 |
neural keel | 2.40e-17 | 52 |
pre-chordal neural plate | 3.77e-17 | 49 |
ecto-epithelium | 5.07e-16 | 73 |
brain | 1.22e-15 | 47 |
future brain | 1.22e-15 | 47 |
regional part of brain | 5.31e-15 | 46 |
anterior neural tube | 9.79e-15 | 40 |
regional part of forebrain | 2.10e-14 | 39 |
forebrain | 2.10e-14 | 39 |
future forebrain | 2.10e-14 | 39 |
gray matter | 6.77e-12 | 34 |
brain grey matter | 7.65e-10 | 29 |
regional part of telencephalon | 7.65e-10 | 29 |
telencephalon | 7.65e-10 | 29 |
structure with developmental contribution from neural crest | 6.29e-09 | 92 |
cerebral cortex | 4.89e-07 | 21 |
cerebral hemisphere | 4.89e-07 | 21 |
pallium | 4.89e-07 | 21 |