FFCP PHASE1:Mm9::chr5:124946979..124947016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |MCL_coexpression_id=6 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:124946979..124947016,- | |||
|description=CAGE_peak_at_chr5:124946979..124947016,- | |description=CAGE_peak_at_chr5:124946979..124947016,- | ||
|id=chr5:124946979..124947016,- | |id=chr5:124946979..124947016,- | ||
|ontology_enrichment_celltype=CL:0000988!5.60e-17!32;CL:0002032!5.60e-17!32;CL:0000037!5.60e-17!32;CL:0000566!5.60e-17!32;CL:0000837!5.60e-17!32;CL:0000838!3.37e-16!12;CL:0000542!8.12e-15!13;CL:0000051!8.12e-15!13;CL:0000084!5.94e-14!11;CL:0000827!5.94e-14!11;CL:0002031!1.73e-12!25;CL:0000738!6.42e-11!17;CL:0002087!6.42e-11!17;CL:0000063!8.26e-11!66;CL:0002320!1.11e-10!46;CL:0000134!1.11e-10!46;CL:0000791!3.05e-10!9;CL:0000789!3.05e-10!9;CL:0002420!3.05e-10!9;CL:0002419!3.05e-10!9;CL:0000790!3.05e-10!9;CL:0000034!8.79e-09!97;CL:0000723!1.16e-08!91;CL:0000048!1.16e-08!91;CL:0000219!1.46e-08!54;CL:0000624!3.34e-08!8;CL:0002250!5.74e-08!3;CL:0000144!9.16e-07!121;CL:0000012!9.16e-07!121 | |ontology_enrichment_celltype=CL:0000988!5.60e-17!32;CL:0002032!5.60e-17!32;CL:0000037!5.60e-17!32;CL:0000566!5.60e-17!32;CL:0000837!5.60e-17!32;CL:0000838!3.37e-16!12;CL:0000542!8.12e-15!13;CL:0000051!8.12e-15!13;CL:0000084!5.94e-14!11;CL:0000827!5.94e-14!11;CL:0002031!1.73e-12!25;CL:0000738!6.42e-11!17;CL:0002087!6.42e-11!17;CL:0000063!8.26e-11!66;CL:0002320!1.11e-10!46;CL:0000134!1.11e-10!46;CL:0000791!3.05e-10!9;CL:0000789!3.05e-10!9;CL:0002420!3.05e-10!9;CL:0002419!3.05e-10!9;CL:0000790!3.05e-10!9;CL:0000034!8.79e-09!97;CL:0000723!1.16e-08!91;CL:0000048!1.16e-08!91;CL:0000219!1.46e-08!54;CL:0000624!3.34e-08!8;CL:0002250!5.74e-08!3;CL:0000144!9.16e-07!121;CL:0000012!9.16e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.90e-22,12;CL:0000791,1.83e-20,9;CL:0000789,1.83e-20,9;CL:0002420,1.83e-20,9;CL:0002419,1.83e-20,9;CL:0000790,1.83e-20,9;CL:0000542,3.84e-20,13;CL:0000051,3.84e-20,13;CL:0000084,9.16e-17,11;CL:0000827,9.16e-17,11;CL:0000738,2.27e-15,17;CL:0002087,2.27e-15,17;CL:0000624,3.61e-15,8;CL:0002031,2.18e-10,25;CL:0000815,5.23e-09,1;CL:0000792,5.23e-09,1;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1;CL:0000625,2.06e-08,1;CL:0000988,4.66e-08,32;CL:0002032,4.66e-08,32;CL:0000037,4.66e-08,32;CL:0000837,4.66e-08,32;CL:0000355,1.10e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.04e-08!3;DOID:4045!1.04e-08!3 | |ontology_enrichment_disease=DOID:0060100!1.04e-08!3;DOID:4045!1.04e-08!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.23e-22,3;DOID:4045,8.23e-22,3;DOID:0050686,3.04e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.11e-10!46 | |ontology_enrichment_uberon=UBERON:0002384!1.11e-10!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.10e-07,9;UBERON:0002036,1.10e-07,9;UBERON:0002385,1.10e-07,9;UBERON:0000486,1.10e-07,9;UBERON:0007503,1.10e-07,9;UBERON:0001015,1.10e-07,9;UBERON:0002329,1.10e-07,9;UBERON:0003082,1.10e-07,9;UBERON:0003059,1.10e-07,9;UBERON:0007282,1.10e-07,9;UBERON:0004290,1.10e-07,9;UBERON:0009618,1.10e-07,9;UBERON:0000383,5.70e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,9.94249590500137,0.140788722151667,0,0,0,3.0816131387617,5.24522414513984,0,0.404950534779652,0,0.946386496074713,0.411343300817216,0,0.0850432901510698,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,2.92972141515835,3.1253413780952,2.09409497589519,40.58797267414,5.46436387966757,6.79714494243615,0,0,0,0,0,0,0,0,0,3.52343472721246,4.35217285206807,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,9.94249590500137,0.140788722151667,0,0,0,3.0816131387617,5.24522414513984,0,0.404950534779652,0,0.946386496074713,0.411343300817216,0,0.0850432901510698,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,2.92972141515835,3.1253413780952,2.09409497589519,40.58797267414,5.46436387966757,6.79714494243615,0,0,0,0,0,0,0,0,0,3.52343472721246,4.35217285206807,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:124946979..124947016,- | |short_description=p@chr5:124946979..124947016,- | ||
}} | }} |
Latest revision as of 07:44, 6 August 2015
Short description: | p@chr5:124946979..124947016, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:124946979..124947016, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.90e-22 | 12 |
mature alpha-beta T cell | 1.83e-20 | 9 |
alpha-beta T cell | 1.83e-20 | 9 |
immature T cell | 1.83e-20 | 9 |
mature T cell | 1.83e-20 | 9 |
immature alpha-beta T cell | 1.83e-20 | 9 |
lymphocyte | 3.84e-20 | 13 |
common lymphoid progenitor | 3.84e-20 | 13 |
T cell | 9.16e-17 | 11 |
pro-T cell | 9.16e-17 | 11 |
leukocyte | 2.27e-15 | 17 |
nongranular leukocyte | 2.27e-15 | 17 |
CD4-positive, alpha-beta T cell | 3.61e-15 | 8 |
hematopoietic lineage restricted progenitor cell | 2.18e-10 | 25 |
regulatory T cell | 5.23e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.23e-09 | 1 |
lymphocyte of B lineage | 1.24e-08 | 1 |
B cell | 1.24e-08 | 1 |
pro-B cell | 1.24e-08 | 1 |
CD8-positive, alpha-beta T cell | 2.06e-08 | 1 |
hematopoietic cell | 4.66e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.66e-08 | 32 |
hematopoietic stem cell | 4.66e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.66e-08 | 32 |
multi-potent skeletal muscle stem cell | 1.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.10e-07 | 9 |
striated muscle tissue | 1.10e-07 | 9 |
muscle tissue | 1.10e-07 | 9 |
multilaminar epithelium | 1.10e-07 | 9 |
epithelial vesicle | 1.10e-07 | 9 |
musculature | 1.10e-07 | 9 |
somite | 1.10e-07 | 9 |
myotome | 1.10e-07 | 9 |
presomitic mesoderm | 1.10e-07 | 9 |
presumptive segmental plate | 1.10e-07 | 9 |
dermomyotome | 1.10e-07 | 9 |
trunk paraxial mesoderm | 1.10e-07 | 9 |
musculature of body | 5.70e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.23e-22 | 3 |
muscle cancer | 8.23e-22 | 3 |
organ system cancer | 3.04e-11 | 6 |