FFCP PHASE1:Mm9::chr11:66340488..66340520,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:66340488..66340520,-|id=chr11:66340488..66340520,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,1.68e-58,2;CL:0002604,1.68e-58,2;CL:0000128,5.38e-44,6;CL:0000126,5.38e-44,6;CL:0000127,5.38e-44,6;CL:0002453,2.45e-33,8;CL:0000333,6.24e-27,10;CL:0000095,6.24e-27,10;CL:0000243,6.24e-27,10;CL:0000123,6.24e-27,10;CL:0000125,6.24e-27,10;CL:0000030,6.24e-27,10;CL:0000339,6.24e-27,10;CL:0002603,1.33e-15,2;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!1.15e-13!12;UBERON:0003057!1.15e-13!12;UBERON:0002240!1.15e-09!6;UBERON:0005174!1.15e-09!6;UBERON:0001137!1.15e-09!6;UBERON:0000991!1.57e-09!18;UBERON:0005564!1.57e-09!18;UBERON:0004176!2.06e-08!17;UBERON:0009196!2.06e-08!17;UBERON:0009117!2.06e-08!17;UBERON:0001948!3.11e-08!5;UBERON:0002315!3.11e-08!5;UBERON:0001049!4.47e-07!52;UBERON:0005068!4.47e-07!52;UBERON:0006241!4.47e-07!52;UBERON:0007135!4.47e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.08e-17,7;UBERON:0003022,1.08e-17,7;UBERON:0002421,1.08e-17,7;UBERON:0000349,1.08e-17,7;UBERON:0002600,1.08e-17,7;UBERON:0002037,1.73e-08,4;UBERON:0002680,1.73e-08,4;UBERON:0001895,1.73e-08,4;UBERON:0010092,1.73e-08,4;UBERON:0006215,1.73e-08,4;UBERON:0002619,5.82e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,2.19686182734472,5.24960727500565,0.979904951377538,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.883474163806454,0,0,0,0,0,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.996601765593721,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr11:66340488..66340520,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:66340488..66340520,- | |||
|description=CAGE_peak_at_chr11:66340488..66340520,- | |||
|id=chr11:66340488..66340520,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.68e-58,2;CL:0002604,1.68e-58,2;CL:0000128,5.38e-44,6;CL:0000126,5.38e-44,6;CL:0000127,5.38e-44,6;CL:0002453,2.45e-33,8;CL:0000333,6.24e-27,10;CL:0000095,6.24e-27,10;CL:0000243,6.24e-27,10;CL:0000123,6.24e-27,10;CL:0000125,6.24e-27,10;CL:0000030,6.24e-27,10;CL:0000339,6.24e-27,10;CL:0002603,1.33e-15,2;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.15e-13!12;UBERON:0003057!1.15e-13!12;UBERON:0002240!1.15e-09!6;UBERON:0005174!1.15e-09!6;UBERON:0001137!1.15e-09!6;UBERON:0000991!1.57e-09!18;UBERON:0005564!1.57e-09!18;UBERON:0004176!2.06e-08!17;UBERON:0009196!2.06e-08!17;UBERON:0009117!2.06e-08!17;UBERON:0001948!3.11e-08!5;UBERON:0002315!3.11e-08!5;UBERON:0001049!4.47e-07!52;UBERON:0005068!4.47e-07!52;UBERON:0006241!4.47e-07!52;UBERON:0007135!4.47e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.08e-17,7;UBERON:0003022,1.08e-17,7;UBERON:0002421,1.08e-17,7;UBERON:0000349,1.08e-17,7;UBERON:0002600,1.08e-17,7;UBERON:0002037,1.73e-08,4;UBERON:0002680,1.73e-08,4;UBERON:0001895,1.73e-08,4;UBERON:0010092,1.73e-08,4;UBERON:0006215,1.73e-08,4;UBERON:0002619,5.82e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,2.19686182734472,5.24960727500565,0.979904951377538,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.883474163806454,0,0,0,0,0,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.996601765593721,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0.441596760403192,0,0,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr11:66340488..66340520,- | |||
}} |
Latest revision as of 07:51, 6 August 2015
Short description: | p@chr11:66340488..66340520, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:66340488..66340520, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.68e-58 | 2 |
astrocyte of the hippocampus | 1.68e-58 | 2 |
oligodendrocyte | 5.38e-44 | 6 |
macroglial cell | 5.38e-44 | 6 |
astrocyte | 5.38e-44 | 6 |
oligodendrocyte precursor cell | 2.45e-33 | 8 |
migratory neural crest cell | 6.24e-27 | 10 |
neuron associated cell | 6.24e-27 | 10 |
glial cell (sensu Vertebrata) | 6.24e-27 | 10 |
neuron associated cell (sensu Vertebrata) | 6.24e-27 | 10 |
glial cell | 6.24e-27 | 10 |
glioblast | 6.24e-27 | 10 |
glioblast (sensu Vertebrata) | 6.24e-27 | 10 |
astrocyte of the cerebellum | 1.33e-15 | 2 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.08e-17 | 7 |
lobe parts of cerebral cortex | 1.08e-17 | 7 |
hippocampal formation | 1.08e-17 | 7 |
limbic system | 1.08e-17 | 7 |
limbic lobe | 1.08e-17 | 7 |
cerebellum | 1.73e-08 | 4 |
regional part of metencephalon | 1.73e-08 | 4 |
metencephalon | 1.73e-08 | 4 |
future metencephalon | 1.73e-08 | 4 |
rhombic lip | 1.73e-08 | 4 |
regional part of cerebral cortex | 5.82e-08 | 17 |