FFCP PHASE1:Mm9::chr3:25571575..25571580,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=199|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:25571575..25571580,-|id=chr3:25571575..25571580,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.73e-15!71;UBERON:0003075!4.73e-15!71;UBERON:0007284!4.73e-15!71;UBERON:0000033!1.62e-12!63;UBERON:0002021!5.03e-12!10;UBERON:0000411!5.03e-12!10;UBERON:0001950!5.03e-12!10;UBERON:0003056!1.44e-11!49;UBERON:0001049!3.86e-11!52;UBERON:0005068!3.86e-11!52;UBERON:0006241!3.86e-11!52;UBERON:0007135!3.86e-11!52;UBERON:0007811!1.08e-10!86;UBERON:0000153!3.90e-10!94;UBERON:0000955!7.71e-10!50;UBERON:0006238!7.71e-10!50;UBERON:0004121!1.84e-09!102;UBERON:0000924!1.84e-09!102;UBERON:0006601!1.84e-09!102;UBERON:0002616!2.95e-09!49;UBERON:0001017!6.46e-09!73;UBERON:0005743!6.46e-09!73;UBERON:0000073!2.08e-08!75;UBERON:0001016!2.08e-08!75;UBERON:0002619!2.66e-08!17;UBERON:0000956!2.98e-08!21;UBERON:0001869!2.98e-08!21;UBERON:0000203!2.98e-08!21;UBERON:0002020!4.78e-08!34;UBERON:0003080!1.74e-07!40;UBERON:0002780!4.17e-07!39;UBERON:0001890!4.17e-07!39;UBERON:0006240!4.17e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.23e-16,10;UBERON:0000411,3.23e-16,10;UBERON:0001950,3.23e-16,10;UBERON:0003056,1.40e-12,49;UBERON:0001851,1.12e-10,1;UBERON:0005889,1.12e-10,1;UBERON:0000970,2.40e-10,9;UBERON:0000019,2.40e-10,9;UBERON:0000047,2.40e-10,9;UBERON:0010312,2.40e-10,9;UBERON:0004088,2.40e-10,9;UBERON:0002104,2.40e-10,9;UBERON:0001456,2.40e-10,9;UBERON:0003072,2.40e-10,9;UBERON:0004128,2.40e-10,9;UBERON:0003071,2.40e-10,9;UBERON:0002619,1.06e-09,17;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0003528,1.15e-08,29;UBERON:0002791,1.15e-08,29;UBERON:0001893,1.15e-08,29;UBERON:0001444,1.41e-08,11;UBERON:0010371,2.39e-08,73;UBERON:0000956,6.48e-08,21;UBERON:0001869,6.48e-08,21;UBERON:0000203,6.48e-08,21;UBERON:0000020,6.54e-08,12;UBERON:0001032,6.54e-08,12;UBERON:0004456,6.54e-08,12;UBERON:0002020,2.12e-07,34;UBERON:0000033,2.40e-07,13;UBERON:0005085,2.40e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,1.68078072554491,0.589257170947335,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.149790639404823,0,0,0.695297280769106,1.02286182932132,0.41557608911912,0.973447578406546,0.203678727700633,0,0.252722758433675,0,0.390361328888111,0,0.180062129805349,1.20563854268572,0.680364991513279,1.92170580427275,1.3118241438362,0.517406741478031,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.506868376472335,0.234714477291508,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,0.572895513439397,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0,0,0.619747364743864,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr3:25571575..25571580,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=199 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:25571575..25571580,- | |||
|description=CAGE_peak_at_chr3:25571575..25571580,- | |||
|id=chr3:25571575..25571580,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.73e-15!71;UBERON:0003075!4.73e-15!71;UBERON:0007284!4.73e-15!71;UBERON:0000033!1.62e-12!63;UBERON:0002021!5.03e-12!10;UBERON:0000411!5.03e-12!10;UBERON:0001950!5.03e-12!10;UBERON:0003056!1.44e-11!49;UBERON:0001049!3.86e-11!52;UBERON:0005068!3.86e-11!52;UBERON:0006241!3.86e-11!52;UBERON:0007135!3.86e-11!52;UBERON:0007811!1.08e-10!86;UBERON:0000153!3.90e-10!94;UBERON:0000955!7.71e-10!50;UBERON:0006238!7.71e-10!50;UBERON:0004121!1.84e-09!102;UBERON:0000924!1.84e-09!102;UBERON:0006601!1.84e-09!102;UBERON:0002616!2.95e-09!49;UBERON:0001017!6.46e-09!73;UBERON:0005743!6.46e-09!73;UBERON:0000073!2.08e-08!75;UBERON:0001016!2.08e-08!75;UBERON:0002619!2.66e-08!17;UBERON:0000956!2.98e-08!21;UBERON:0001869!2.98e-08!21;UBERON:0000203!2.98e-08!21;UBERON:0002020!4.78e-08!34;UBERON:0003080!1.74e-07!40;UBERON:0002780!4.17e-07!39;UBERON:0001890!4.17e-07!39;UBERON:0006240!4.17e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.23e-16,10;UBERON:0000411,3.23e-16,10;UBERON:0001950,3.23e-16,10;UBERON:0003056,1.40e-12,49;UBERON:0001851,1.12e-10,1;UBERON:0005889,1.12e-10,1;UBERON:0000970,2.40e-10,9;UBERON:0000019,2.40e-10,9;UBERON:0000047,2.40e-10,9;UBERON:0010312,2.40e-10,9;UBERON:0004088,2.40e-10,9;UBERON:0002104,2.40e-10,9;UBERON:0001456,2.40e-10,9;UBERON:0003072,2.40e-10,9;UBERON:0004128,2.40e-10,9;UBERON:0003071,2.40e-10,9;UBERON:0002619,1.06e-09,17;UBERON:0002346,1.44e-09,64;UBERON:0003075,1.44e-09,64;UBERON:0007284,1.44e-09,64;UBERON:0003528,1.15e-08,29;UBERON:0002791,1.15e-08,29;UBERON:0001893,1.15e-08,29;UBERON:0001444,1.41e-08,11;UBERON:0010371,2.39e-08,73;UBERON:0000956,6.48e-08,21;UBERON:0001869,6.48e-08,21;UBERON:0000203,6.48e-08,21;UBERON:0000020,6.54e-08,12;UBERON:0001032,6.54e-08,12;UBERON:0004456,6.54e-08,12;UBERON:0002020,2.12e-07,34;UBERON:0000033,2.40e-07,13;UBERON:0005085,2.40e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0,1.68078072554491,0.589257170947335,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.149790639404823,0,0,0.695297280769106,1.02286182932132,0.41557608911912,0.973447578406546,0.203678727700633,0,0.252722758433675,0,0.390361328888111,0,0.180062129805349,1.20563854268572,0.680364991513279,1.92170580427275,1.3118241438362,0.517406741478031,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.354680467284547,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.506868376472335,0.234714477291508,0,0,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,0.572895513439397,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0,0,0.619747364743864,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr3:25571575..25571580,- | |||
}} |
Latest revision as of 07:58, 6 August 2015
Short description: | p@chr3:25571575..25571580, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:25571575..25571580, - |
Coexpression cluster: | MCL_coexpression_mm9:199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.23e-16 | 10 |
visual cortex | 3.23e-16 | 10 |
neocortex | 3.23e-16 | 10 |
pre-chordal neural plate | 1.40e-12 | 49 |
cortex | 1.12e-10 | 1 |
zygote cortex | 1.12e-10 | 1 |
eye | 2.40e-10 | 9 |
camera-type eye | 2.40e-10 | 9 |
simple eye | 2.40e-10 | 9 |
immature eye | 2.40e-10 | 9 |
ocular region | 2.40e-10 | 9 |
visual system | 2.40e-10 | 9 |
face | 2.40e-10 | 9 |
optic cup | 2.40e-10 | 9 |
optic vesicle | 2.40e-10 | 9 |
eye primordium | 2.40e-10 | 9 |
regional part of cerebral cortex | 1.06e-09 | 17 |
neurectoderm | 1.44e-09 | 64 |
neural plate | 1.44e-09 | 64 |
presumptive neural plate | 1.44e-09 | 64 |
brain grey matter | 1.15e-08 | 29 |
regional part of telencephalon | 1.15e-08 | 29 |
telencephalon | 1.15e-08 | 29 |
subdivision of head | 1.41e-08 | 11 |
ecto-epithelium | 2.39e-08 | 73 |
cerebral cortex | 6.48e-08 | 21 |
cerebral hemisphere | 6.48e-08 | 21 |
pallium | 6.48e-08 | 21 |
sense organ | 6.54e-08 | 12 |
sensory system | 6.54e-08 | 12 |
entire sense organ system | 6.54e-08 | 12 |
gray matter | 2.12e-07 | 34 |
head | 2.40e-07 | 13 |
ectodermal placode | 2.40e-07 | 13 |