FFCP PHASE1:Mm9::chr16:33726757..33726774,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1693|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:33726757..33726774,+|id=chr16:33726757..33726774,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,2.67e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.80e-12!33;UBERON:0004535!4.05e-12!23;UBERON:0001009!4.05e-12!23;UBERON:0007100!1.27e-09!18;UBERON:0000948!1.27e-09!18;UBERON:0005498!1.27e-09!18;UBERON:0004140!1.27e-09!18;UBERON:0009881!1.27e-09!18;UBERON:0004141!1.27e-09!18;UBERON:0003084!1.27e-09!18;UBERON:0007005!1.27e-09!18;UBERON:0004139!1.27e-09!18;UBERON:0004291!1.27e-09!18;UBERON:0000468!9.27e-08!333;UBERON:0001048!6.12e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.30e-17,23;UBERON:0001009,1.30e-17,23;UBERON:0004872,9.34e-16,33;UBERON:0007100,8.70e-14,18;UBERON:0000948,8.70e-14,18;UBERON:0005498,8.70e-14,18;UBERON:0004140,8.70e-14,18;UBERON:0009881,8.70e-14,18;UBERON:0004141,8.70e-14,18;UBERON:0003084,8.70e-14,18;UBERON:0007005,8.70e-14,18;UBERON:0004139,8.70e-14,18;UBERON:0004291,8.70e-14,18;UBERON:0002048,5.06e-09,14;UBERON:0000117,5.06e-09,14;UBERON:0000171,5.06e-09,14;UBERON:0000170,5.06e-09,14;UBERON:0005597,5.06e-09,14;UBERON:0000118,5.06e-09,14;UBERON:0004111,2.13e-08,122;UBERON:0000025,2.55e-08,114;UBERON:0003103,5.32e-08,43;UBERON:0005178,1.36e-07,17;UBERON:0005181,1.36e-07,17;UBERON:0002224,1.36e-07,17;UBERON:0000915,1.36e-07,17;UBERON:0008947,1.36e-07,17;UBERON:0003258,1.36e-07,17;UBERON:0005153,9.87e-07,17|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,1.97104211012333,1.87251621057595,0.513653904676515,0.319088635981346,0.513602189793617,0.34968160967599,0,0.202475267389826,0,0.473193248037357,0.548457734422955,0,0.765389611359628,0.198581902401771,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.62203089951223,3.67093504323363,0.782391344348039,2.18025156380447,3.07560655828261,5.8328969722285,1.81982348112971,0,0.671130424230945,0,0.336093799142464,12.6057123657614,4.87106847895886,4.64104883049698,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,1.53687322128622,1.14058573539325,1.35005938331691,0.630974884054146,0,0.220868540951614,0.734944795289724,0.766763768145891,0.919218786610021,0,0.510749352340751,0.921639199537461,0,0.365950574409639,0.52091337055676,0,0,0.15279824777681,1.17851434189467,0.427115042397309,0.186399445825301,0.227178579999552,0.226714680320357,4.92769630792852,0.860423876981386,0,0,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,1.01104889002957,0,0.517875767294343,0.593768556259299,0.520455980298408,1.52232739156071,0.691846491768175,1.05505848386836,1.88141931417128,0.376999773989026,0,3.03658649531814,0,1.29413479957927,1.54589062922275,0.969750506270444,0,0.878342391034642,1.25668024088073,0,0.11981512450592,0,0,0.149790639404823,1.37250180845588,0.376963056338593,0.347648640384553,0.255715457330331,0.62336413367868,0.648965052271031,3.1570202793598,0.622034853050465,0.758168275301024,0.631325567659422,0,0.229902104433473,0.540186389416048,0.753524089178575,0.95251098811859,0.896796041993948,0.749613796477831,2.32833033665114,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0.278047249225598,0,0.823128545631774,0.995171334092466,0,0.257347907114715,0.284163499395593,0.414251545071004,2.57978665979206,2.16074473753218,1.42046841351126,2.16440654922144,2.77680803197281,3.0229412817553,2.68273401399619,2.6856028744449,2.46839774870221,5.74586124276833,2.83740833410495,2.33919979880532,1.97595103761946,1.61047702512446,0,1.02904612379284,0,0.264450566663544,0.853153002140936,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,0.398282546508734,0.948339504765408,0.571242563048644,0,0.814605311381257,0.387904974335251,1.40271639780637,0.885311519739602,1.91893192373483,1.09899109488962,0.493588655687202,0.296452627087149,0.83422552858047,0,0,0,0,0.25462585178142,0,0.810676133875177,0.823684239564244,12.9391385874619,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,3.51031061316549,0,0.651859905768103,1.01847051465113,2.11221223459652,1.34005005953453,2.85652369063216,4.29294025287157,4.09851374676097,8.858587585951,3.34855014180723,7.53771247692395,8.80693407516067,5.06271705035291,0,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,0.937693492737625,1.3114795630134,0.252470927204373,0.94652465824877,0.390438744296638,2.36965737506079,0.477937595905104,0.445597348164788,0.566153061577665,0,0.584511715822624,1.18586333383957,0.321321316421807,2.41298144854057,3.38324646967785,2.76907830901079,2.14461159864296,0,1.21390318077491,0.604647113929502,0.754420319023592,0.295301892880773,1.22974059177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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1693 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:33726757..33726774,+ | |||
|description=CAGE_peak_at_chr16:33726757..33726774,+ | |||
|id=chr16:33726757..33726774,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.67e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.80e-12!33;UBERON:0004535!4.05e-12!23;UBERON:0001009!4.05e-12!23;UBERON:0007100!1.27e-09!18;UBERON:0000948!1.27e-09!18;UBERON:0005498!1.27e-09!18;UBERON:0004140!1.27e-09!18;UBERON:0009881!1.27e-09!18;UBERON:0004141!1.27e-09!18;UBERON:0003084!1.27e-09!18;UBERON:0007005!1.27e-09!18;UBERON:0004139!1.27e-09!18;UBERON:0004291!1.27e-09!18;UBERON:0000468!9.27e-08!333;UBERON:0001048!6.12e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.30e-17,23;UBERON:0001009,1.30e-17,23;UBERON:0004872,9.34e-16,33;UBERON:0007100,8.70e-14,18;UBERON:0000948,8.70e-14,18;UBERON:0005498,8.70e-14,18;UBERON:0004140,8.70e-14,18;UBERON:0009881,8.70e-14,18;UBERON:0004141,8.70e-14,18;UBERON:0003084,8.70e-14,18;UBERON:0007005,8.70e-14,18;UBERON:0004139,8.70e-14,18;UBERON:0004291,8.70e-14,18;UBERON:0002048,5.06e-09,14;UBERON:0000117,5.06e-09,14;UBERON:0000171,5.06e-09,14;UBERON:0000170,5.06e-09,14;UBERON:0005597,5.06e-09,14;UBERON:0000118,5.06e-09,14;UBERON:0004111,2.13e-08,122;UBERON:0000025,2.55e-08,114;UBERON:0003103,5.32e-08,43;UBERON:0005178,1.36e-07,17;UBERON:0005181,1.36e-07,17;UBERON:0002224,1.36e-07,17;UBERON:0000915,1.36e-07,17;UBERON:0008947,1.36e-07,17;UBERON:0003258,1.36e-07,17;UBERON:0005153,9.87e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,1.97104211012333,1.87251621057595,0.513653904676515,0.319088635981346,0.513602189793617,0.34968160967599,0,0.202475267389826,0,0.473193248037357,0.548457734422955,0,0.765389611359628,0.198581902401771,1.04479915655574,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.62203089951223,3.67093504323363,0.782391344348039,2.18025156380447,3.07560655828261,5.8328969722285,1.81982348112971,0,0.671130424230945,0,0.336093799142464,12.6057123657614,4.87106847895886,4.64104883049698,0.404632921719196,0,1.26766280701236,0,0,0,0,0,0,1.53687322128622,1.14058573539325,1.35005938331691,0.630974884054146,0,0.220868540951614,0.734944795289724,0.766763768145891,0.919218786610021,0,0.510749352340751,0.921639199537461,0,0.365950574409639,0.52091337055676,0,0,0.15279824777681,1.17851434189467,0.427115042397309,0.186399445825301,0.227178579999552,0.226714680320357,4.92769630792852,0.860423876981386,0,0,0,0,0.561777680527007,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0,0,1.01104889002957,0,0.517875767294343,0.593768556259299,0.520455980298408,1.52232739156071,0.691846491768175,1.05505848386836,1.88141931417128,0.376999773989026,0,3.03658649531814,0,1.29413479957927,1.54589062922275,0.969750506270444,0,0.878342391034642,1.25668024088073,0,0.11981512450592,0,0,0.149790639404823,1.37250180845588,0.376963056338593,0.347648640384553,0.255715457330331,0.62336413367868,0.648965052271031,3.1570202793598,0.622034853050465,0.758168275301024,0.631325567659422,0,0.229902104433473,0.540186389416048,0.753524089178575,0.95251098811859,0.896796041993948,0.749613796477831,2.32833033665114,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0.278047249225598,0,0.823128545631774,0.995171334092466,0,0.257347907114715,0.284163499395593,0.414251545071004,2.57978665979206,2.16074473753218,1.42046841351126,2.16440654922144,2.77680803197281,3.0229412817553,2.68273401399619,2.6856028744449,2.46839774870221,5.74586124276833,2.83740833410495,2.33919979880532,1.97595103761946,1.61047702512446,0,1.02904612379284,0,0.264450566663544,0.853153002140936,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.823494773620054,1.00534083520108,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,0.398282546508734,0.948339504765408,0.571242563048644,0,0.814605311381257,0.387904974335251,1.40271639780637,0.885311519739602,1.91893192373483,1.09899109488962,0.493588655687202,0.296452627087149,0.83422552858047,0,0,0,0,0.25462585178142,0,0.810676133875177,0.823684239564244,12.9391385874619,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,3.51031061316549,0,0.651859905768103,1.01847051465113,2.11221223459652,1.34005005953453,2.85652369063216,4.29294025287157,4.09851374676097,8.858587585951,3.34855014180723,7.53771247692395,8.80693407516067,5.06271705035291,0,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,0.937693492737625,1.3114795630134,0.252470927204373,0.94652465824877,0.390438744296638,2.36965737506079,0.477937595905104,0.445597348164788,0.566153061577665,0,0.584511715822624,1.18586333383957,0.321321316421807,2.41298144854057,3.38324646967785,2.76907830901079,2.14461159864296,0,1.21390318077491,0.604647113929502,0.754420319023592,0.295301892880773,1.22974059177571,0.775284879504663,0.363533729477506,0.356497378384721,2.52829406348653,0,1.03135543248187,1.36175842301515,0.36012218806262,0.646793418913773,0.428674070063185,0.886701168211368,1.96205699362278,0.987294123612726,2.13125464380219,1.64270195644597,0.42366414172764,0,0.32977250588296,1.61464426695906,0.603129249281559,0.596861720015682,1.14898629821543,1.7488850197791,0.556275906031529,0.341741761595705,1.03193433981611,2.03713980106683,0.753473828018764,1.50363650493128,0.915112692826091,0,0,0.276399947608848,0,0.316335993581135,0.813277868507395,1.51207477150522,0.627264888043406,2.18362563746178,1.21377911746339,0.578574190077352,1.30877970992015,0.648074866458964,0,0,0.299033092087958,0.330916980914195,0.777804753376191,0.774958940866387,1.68956125490778,1.76035857968631,1.5624526181274,0.419437377702843,0.724752362478018,0.864090018773596,0.948033361884535,0.202725215290164,1.1298205288131,0.909445760844565,0.537080087002444,0.79472541912506,1.08175904567972,0.738447635872886,0.908698049533329,0.762068066549998,0.806609481094724,1.46186821109629,0.865906574762965,1.05189211963412,1.13365191807606,0.665957860122194,0.179427713218951,0.503653849092235,1.9318959403219,1.68914227906064,0.915758121336325,0.428736758158132,2.00628841614145,0,0.920650473014354,0,1.54667864109319,0,1.5107877947794,0,0,0.453142408984205,0,0.207574695168353,0.798049746802062,0,0.972426868273176,0,0.183843508450014,1.11123363900808,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.34461281373368,0.952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| |||
|short_description=p@chr16:33726757..33726774,+ | |||
}} |
Latest revision as of 08:22, 6 August 2015
Short description: | p@chr16:33726757..33726774, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:33726757..33726774, + |
Coexpression cluster: | MCL_coexpression_mm9:1693 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.67e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.30e-17 | 23 |
circulatory system | 1.30e-17 | 23 |
splanchnic layer of lateral plate mesoderm | 9.34e-16 | 33 |
primary circulatory organ | 8.70e-14 | 18 |
heart | 8.70e-14 | 18 |
primitive heart tube | 8.70e-14 | 18 |
primary heart field | 8.70e-14 | 18 |
anterior lateral plate mesoderm | 8.70e-14 | 18 |
heart tube | 8.70e-14 | 18 |
heart primordium | 8.70e-14 | 18 |
cardiac mesoderm | 8.70e-14 | 18 |
cardiogenic plate | 8.70e-14 | 18 |
heart rudiment | 8.70e-14 | 18 |
lung | 5.06e-09 | 14 |
respiratory tube | 5.06e-09 | 14 |
respiration organ | 5.06e-09 | 14 |
pair of lungs | 5.06e-09 | 14 |
lung primordium | 5.06e-09 | 14 |
lung bud | 5.06e-09 | 14 |
anatomical conduit | 2.13e-08 | 122 |
tube | 2.55e-08 | 114 |
compound organ | 5.32e-08 | 43 |
thoracic cavity element | 1.36e-07 | 17 |
thoracic segment organ | 1.36e-07 | 17 |
thoracic cavity | 1.36e-07 | 17 |
thoracic segment of trunk | 1.36e-07 | 17 |
respiratory primordium | 1.36e-07 | 17 |
endoderm of foregut | 1.36e-07 | 17 |
epithelial bud | 9.87e-07 | 17 |