FFCP PHASE1:Mm9::chr19:21812144..21812152,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:21812144..21812152,- | |||
|description=CAGE_peak_at_chr19:21812144..21812152,- | |description=CAGE_peak_at_chr19:21812144..21812152,- | ||
|id=chr19:21812144..21812152,- | |id=chr19:21812144..21812152,- | ||
|ontology_enrichment_celltype=CL:0000988!4.79e-18!32;CL:0002032!4.79e-18!32;CL:0000037!4.79e-18!32;CL:0000566!4.79e-18!32;CL:0000837!4.79e-18!32;CL:0000791!4.67e-14!9;CL:0000789!4.67e-14!9;CL:0002420!4.67e-14!9;CL:0002419!4.67e-14!9;CL:0000790!4.67e-14!9;CL:0000838!4.40e-13!12;CL:0002320!7.45e-13!46;CL:0000134!7.45e-13!46;CL:0000893!3.97e-12!6;CL:0002489!3.97e-12!6;CL:0000898!3.97e-12!6;CL:0000809!3.97e-12!6;CL:0000810!3.97e-12!6;CL:0000895!3.97e-12!6;CL:0000808!3.97e-12!6;CL:0000894!3.97e-12!6;CL:0000806!3.97e-12!6;CL:0000807!3.97e-12!6;CL:0000805!3.97e-12!6;CL:0002425!3.97e-12!6;CL:0002436!3.97e-12!6;CL:0002427!3.97e-12!6;CL:0002428!3.97e-12!6;CL:0002429!3.97e-12!6;CL:0002433!3.97e-12!6;CL:0002431!3.97e-12!6;CL:0002432!3.97e-12!6;CL:0000624!4.10e-12!8;CL:0000542!6.11e-12!13;CL:0000051!6.11e-12!13;CL:0000084!3.04e-11!11;CL:0000827!3.04e-11!11;CL:0000034!2.15e-10!97;CL:0000219!2.90e-10!54;CL:0002031!1.01e-09!25;CL:0000738!1.01e-08!17;CL:0002087!1.01e-08!17;CL:0000063!1.56e-08!66;CL:0000049!6.37e-08!19;CL:0000723!1.78e-07!91;CL:0000048!1.78e-07!91;CL:0000144!4.53e-07!121;CL:0000012!4.53e-07!121 | |ontology_enrichment_celltype=CL:0000988!4.79e-18!32;CL:0002032!4.79e-18!32;CL:0000037!4.79e-18!32;CL:0000566!4.79e-18!32;CL:0000837!4.79e-18!32;CL:0000791!4.67e-14!9;CL:0000789!4.67e-14!9;CL:0002420!4.67e-14!9;CL:0002419!4.67e-14!9;CL:0000790!4.67e-14!9;CL:0000838!4.40e-13!12;CL:0002320!7.45e-13!46;CL:0000134!7.45e-13!46;CL:0000893!3.97e-12!6;CL:0002489!3.97e-12!6;CL:0000898!3.97e-12!6;CL:0000809!3.97e-12!6;CL:0000810!3.97e-12!6;CL:0000895!3.97e-12!6;CL:0000808!3.97e-12!6;CL:0000894!3.97e-12!6;CL:0000806!3.97e-12!6;CL:0000807!3.97e-12!6;CL:0000805!3.97e-12!6;CL:0002425!3.97e-12!6;CL:0002436!3.97e-12!6;CL:0002427!3.97e-12!6;CL:0002428!3.97e-12!6;CL:0002429!3.97e-12!6;CL:0002433!3.97e-12!6;CL:0002431!3.97e-12!6;CL:0002432!3.97e-12!6;CL:0000624!4.10e-12!8;CL:0000542!6.11e-12!13;CL:0000051!6.11e-12!13;CL:0000084!3.04e-11!11;CL:0000827!3.04e-11!11;CL:0000034!2.15e-10!97;CL:0000219!2.90e-10!54;CL:0002031!1.01e-09!25;CL:0000738!1.01e-08!17;CL:0002087!1.01e-08!17;CL:0000063!1.56e-08!66;CL:0000049!6.37e-08!19;CL:0000723!1.78e-07!91;CL:0000048!1.78e-07!91;CL:0000144!4.53e-07!121;CL:0000012!4.53e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.29e-08,1;CL:0002078,6.29e-08,1;CL:0000115,6.29e-08,1;CL:0002262,6.29e-08,1;CL:1000398,6.29e-08,1;CL:0000945,2.37e-07,1;CL:0000236,2.37e-07,1;CL:0000826,2.37e-07,1;CL:0000625,3.16e-07,1;CL:0000355,5.43e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.06e-08!3;DOID:4045!4.06e-08!3 | |ontology_enrichment_disease=DOID:0060100!4.06e-08!3;DOID:4045!4.06e-08!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.19e-20,3;DOID:4045,7.19e-20,3;DOID:0050686,3.09e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.45e-13!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.29e-08,1;UBERON:0001281,6.29e-08,1;UBERON:0000353,6.29e-08,1;UBERON:0003497,6.29e-08,1;UBERON:0003909,6.29e-08,1;UBERON:0003928,6.29e-08,1;UBERON:0003835,6.29e-08,1;UBERON:0003513,6.29e-08,1;UBERON:0001280,6.29e-08,1;UBERON:0004647,6.29e-08,1;UBERON:0002294,6.29e-08,1;UBERON:0001173,6.29e-08,1;UBERON:0004912,6.29e-08,1;UBERON:0005171,6.29e-08,1;UBERON:0001134,5.43e-07,9;UBERON:0002036,5.43e-07,9;UBERON:0002385,5.43e-07,9;UBERON:0000486,5.43e-07,9;UBERON:0007503,5.43e-07,9;UBERON:0001015,5.43e-07,9;UBERON:0002329,5.43e-07,9;UBERON:0003082,5.43e-07,9;UBERON:0003059,5.43e-07,9;UBERON:0007282,5.43e-07,9;UBERON:0004290,5.43e-07,9;UBERON:0009618,5.43e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,1.54080656938085,0.786783621770977,0,0.404950534779652,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,1.5626706890476,2.61761871986899,17.0587131528994,9.56263678941824,3.88408282424923,0,0,0,0,0,0,0,0,0,1.34226084846189,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95674772884027,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.849892149969277,1.25956307091292,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,1.54080656938085,0.786783621770977,0,0.404950534779652,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,1.5626706890476,2.61761871986899,17.0587131528994,9.56263678941824,3.88408282424923,0,0,0,0,0,0,0,0,0,1.34226084846189,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95674772884027,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,1.79970819298022,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.849892149969277,1.25956307091292,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:21812144..21812152,- | |short_description=p@chr19:21812144..21812152,- | ||
}} | }} |
Latest revision as of 09:39, 6 August 2015
Short description: | p@chr19:21812144..21812152, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:21812144..21812152, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.29e-08 | 1 |
meso-epithelial cell | 6.29e-08 | 1 |
endothelial cell | 6.29e-08 | 1 |
endothelial cell of sinusoid | 6.29e-08 | 1 |
endothelial cell of hepatic sinusoid | 6.29e-08 | 1 |
lymphocyte of B lineage | 2.37e-07 | 1 |
B cell | 2.37e-07 | 1 |
pro-B cell | 2.37e-07 | 1 |
CD8-positive, alpha-beta T cell | 3.16e-07 | 1 |
multi-potent skeletal muscle stem cell | 5.43e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 6.29e-08 | 1 |
hepatic sinusoid | 6.29e-08 | 1 |
parenchyma | 6.29e-08 | 1 |
abdomen blood vessel | 6.29e-08 | 1 |
sinusoid | 6.29e-08 | 1 |
digestive system duct | 6.29e-08 | 1 |
abdominal segment blood vessel | 6.29e-08 | 1 |
trunk blood vessel | 6.29e-08 | 1 |
liver parenchyma | 6.29e-08 | 1 |
liver lobule | 6.29e-08 | 1 |
biliary system | 6.29e-08 | 1 |
biliary tree | 6.29e-08 | 1 |
biliary bud | 6.29e-08 | 1 |
hepatic duct | 6.29e-08 | 1 |
skeletal muscle tissue | 5.43e-07 | 9 |
striated muscle tissue | 5.43e-07 | 9 |
muscle tissue | 5.43e-07 | 9 |
multilaminar epithelium | 5.43e-07 | 9 |
epithelial vesicle | 5.43e-07 | 9 |
musculature | 5.43e-07 | 9 |
somite | 5.43e-07 | 9 |
myotome | 5.43e-07 | 9 |
presomitic mesoderm | 5.43e-07 | 9 |
presumptive segmental plate | 5.43e-07 | 9 |
dermomyotome | 5.43e-07 | 9 |
trunk paraxial mesoderm | 5.43e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.19e-20 | 3 |
muscle cancer | 7.19e-20 | 3 |
organ system cancer | 3.09e-10 | 6 |