FFCP PHASE1:Mm9::chrX:70739970..70739981,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:70739970..70739981,+ | |||
|description=CAGE_peak_at_chrX:70739970..70739981,+ | |description=CAGE_peak_at_chrX:70739970..70739981,+ | ||
|id=chrX:70739970..70739981,+ | |id=chrX:70739970..70739981,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.83e-12,6;CL:0000187,1.83e-12,6;CL:0000056,1.83e-12,6;CL:0000222,1.57e-10,7;CL:0000355,5.90e-08,9;CL:0002494,3.57e-07,3;CL:0000737,3.57e-07,3;CL:0000746,3.57e-07,3;CL:0000513,3.57e-07,3;CL:0000192,6.90e-07,3;CL:0000359,6.90e-07,3;CL:0002539,6.90e-07,3;CL:0000514,6.90e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.76e-08,4;UBERON:0001637,1.76e-08,4;UBERON:0004573,1.76e-08,4;UBERON:0003509,1.76e-08,4;UBERON:0004571,1.76e-08,4;UBERON:0010191,1.76e-08,4;UBERON:0004572,1.76e-08,4;UBERON:0002204,2.11e-08,32;UBERON:0001134,5.90e-08,9;UBERON:0002036,5.90e-08,9;UBERON:0002385,5.90e-08,9;UBERON:0000486,5.90e-08,9;UBERON:0007503,5.90e-08,9;UBERON:0001015,5.90e-08,9;UBERON:0002329,5.90e-08,9;UBERON:0003082,5.90e-08,9;UBERON:0003059,5.90e-08,9;UBERON:0007282,5.90e-08,9;UBERON:0004290,5.90e-08,9;UBERON:0009618,5.90e-08,9;UBERON:0000383,4.67e-07,10;UBERON:0001135,6.90e-07,3;UBERON:0004237,6.90e-07,3;UBERON:0004695,6.90e-07,3;UBERON:0002111,6.90e-07,3;UBERON:0004178,6.90e-07,3;UBERON:0000055,9.69e-07,5;UBERON:0007500,9.69e-07,5;UBERON:0001981,9.69e-07,5;UBERON:0002049,9.69e-07,5;UBERON:0007798,9.69e-07,5;UBERON:0004537,9.69e-07,5;UBERON:0006965,9.69e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,5.77848507951233,6.60768307782054,13.3006528539167,0.218025156380447,0.219686182734472,0.777719596297134,1.67983705950435,1.43752564364972,0,0,0,14.663787854049,8.5960031981627,11.3447860301037,0,0,0,3.38844532069132,2.66788438833342,5.39939830368839,3.9554654502679,2.1314403448383,2.99600110518405,1.15265491596466,0.311068836925433,0,0,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.711858403995515,0.186399445825301,0,0.0755715601067855,0.579728977403356,2.58127163094416,0,0,0,0,0.280888840263504,11.759692257886,10.6512261887176,6.36011234118612,0,2.56652954828636,0,0,0,0,0,0,0.517875767294343,0.593768556259299,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.628332956648377,0.741584903203122,2.74738778147832,0,1.45590164952668,1.32504911076236,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0,0,0.125654352112864,0,0,0,0,1.2220723662038,1.36847667671102,0.505445516867349,0.841767423545896,0,0.229902104433473,0,0.60281927134286,0.476255494059295,0.768682321709099,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.834141747676794,1.74126083261083,2.67516777330327,0.199034266818493,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0,0.462801338662135,0.697601834251224,0,0.467061369468678,0.822799249567402,0.985004784474571,0.56748166682099,0.730999937126662,0.658650345873152,0,0,0,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.738050739898011,0.784993639206874,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0,0.488894929326078,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,0.975668239288994,1.10344600874334,1.10732344824387,1.2756381492599,1.80249646187312,1.72684981865896,2.16973587872267,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,3.93443868904021,0.757412781613119,0.315508219416257,0,0,0,0,0.283076530788832,0.809621403349789,0,0,0,0.425820255624806,0.712262414669021,0.651547837414304,0.659880491890142,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.822745103010605,0.608929898229199,0,0,0.220528398054962,0.49465875882444,1.29171541356724,0.844380948994182,0.835606408021955,0.656563598980245,0.582961673259701,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0,0.139951452323658,0,4.77335309007557,0,0.609958401380546,0.216010681643603,0.627264888043406,0.655087691238533,0.944050424693745,0.578574190077352,0.785267825952089,0.259229946583586,0.621339313086926,0,0.149516546043979,0.330916980914195,0.583353565032143,0.904118764344118,1.18269287843545,1.29092962510329,1.17183946359555,0.209718688851422,0.241584120826006,0,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.35232715822533,1.68914227906064,0.36630324853453,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.187283014939765,0.640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,1.47198920134397,0.342869252385415,0.70990322463735,0.476872379894642,0.726732083161643,0.376437521661322,0.25384382367503,0.73171189149109,0.263069711437843,0.543216455383447,1.68342681497322,0.949080144993393,0.689531376628944,0.409231043169689,0.619747364743864,1.15743966588685,1.24905288968973,1.16965804222704,0.859484216193193,0.382576664137687,1.54413993383661,1.15933917810211 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,5.77848507951233,6.60768307782054,13.3006528539167,0.218025156380447,0.219686182734472,0.777719596297134,1.67983705950435,1.43752564364972,0,0,0,14.663787854049,8.5960031981627,11.3447860301037,0,0,0,3.38844532069132,2.66788438833342,5.39939830368839,3.9554654502679,2.1314403448383,2.99600110518405,1.15265491596466,0.311068836925433,0,0,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.711858403995515,0.186399445825301,0,0.0755715601067855,0.579728977403356,2.58127163094416,0,0,0,0,0.280888840263504,11.759692257886,10.6512261887176,6.36011234118612,0,2.56652954828636,0,0,0,0,0,0,0.517875767294343,0.593768556259299,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.628332956648377,0.741584903203122,2.74738778147832,0,1.45590164952668,1.32504911076236,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0,0,0.125654352112864,0,0,0,0,1.2220723662038,1.36847667671102,0.505445516867349,0.841767423545896,0,0.229902104433473,0,0.60281927134286,0.476255494059295,0.768682321709099,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.834141747676794,1.74126083261083,2.67516777330327,0.199034266818493,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0,0.462801338662135,0.697601834251224,0,0.467061369468678,0.822799249567402,0.985004784474571,0.56748166682099,0.730999937126662,0.658650345873152,0,0,0,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.738050739898011,0.784993639206874,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.47802552133284,0,0.488894929326078,0.169745085775188,0.704070744865506,0.335012514883631,0.714130922658041,0.975668239288994,1.10344600874334,1.10732344824387,1.2756381492599,1.80249646187312,1.72684981865896,2.16973587872267,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,3.93443868904021,0.757412781613119,0.315508219416257,0,0,0,0,0.283076530788832,0.809621403349789,0,0,0,0.425820255624806,0.712262414669021,0.651547837414304,0.659880491890142,0,0,0.302323556964751,0.565815239267694,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.535106452806212,0.822745103010605,0.608929898229199,0,0,0.220528398054962,0.49465875882444,1.29171541356724,0.844380948994182,0.835606408021955,0.656563598980245,0.582961673259701,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.27338845544205,0.228778173206523,0,0.139951452323658,0,4.77335309007557,0,0.609958401380546,0.216010681643603,0.627264888043406,0.655087691238533,0.944050424693745,0.578574190077352,0.785267825952089,0.259229946583586,0.621339313086926,0,0.149516546043979,0.330916980914195,0.583353565032143,0.904118764344118,1.18269287843545,1.29092962510329,1.17183946359555,0.209718688851422,0.241584120826006,0,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.35232715822533,1.68914227906064,0.36630324853453,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.187283014939765,0.640251524048693,0.402048282689293,0.476293691283074,0.115884325944855,0.578727661391115,0.412085900803307,1.47198920134397,0.342869252385415,0.70990322463735,0.476872379894642,0.726732083161643,0.376437521661322,0.25384382367503,0.73171189149109,0.263069711437843,0.543216455383447,1.68342681497322,0.949080144993393,0.689531376628944,0.409231043169689,0.619747364743864,1.15743966588685,1.24905288968973,1.16965804222704,0.859484216193193,0.382576664137687,1.54413993383661,1.15933917810211 | ||
|short_description=p@chrX:70739970..70739981,+ | |short_description=p@chrX:70739970..70739981,+ | ||
}} | }} |
Latest revision as of 09:57, 6 August 2015
Short description: | p@chrX:70739970..70739981, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:70739970..70739981, + |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.83e-12 | 6 |
muscle cell | 1.83e-12 | 6 |
myoblast | 1.83e-12 | 6 |
mesodermal cell | 1.57e-10 | 7 |
multi-potent skeletal muscle stem cell | 5.90e-08 | 9 |
cardiocyte | 3.57e-07 | 3 |
striated muscle cell | 3.57e-07 | 3 |
cardiac muscle cell | 3.57e-07 | 3 |
cardiac muscle myoblast | 3.57e-07 | 3 |
smooth muscle cell | 6.90e-07 | 3 |
vascular associated smooth muscle cell | 6.90e-07 | 3 |
aortic smooth muscle cell | 6.90e-07 | 3 |
smooth muscle myoblast | 6.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.76e-08 | 4 |
artery | 1.76e-08 | 4 |
systemic artery | 1.76e-08 | 4 |
arterial blood vessel | 1.76e-08 | 4 |
systemic arterial system | 1.76e-08 | 4 |
aortic system | 1.76e-08 | 4 |
arterial system | 1.76e-08 | 4 |
musculoskeletal system | 2.11e-08 | 32 |
skeletal muscle tissue | 5.90e-08 | 9 |
striated muscle tissue | 5.90e-08 | 9 |
muscle tissue | 5.90e-08 | 9 |
multilaminar epithelium | 5.90e-08 | 9 |
epithelial vesicle | 5.90e-08 | 9 |
musculature | 5.90e-08 | 9 |
somite | 5.90e-08 | 9 |
myotome | 5.90e-08 | 9 |
presomitic mesoderm | 5.90e-08 | 9 |
presumptive segmental plate | 5.90e-08 | 9 |
dermomyotome | 5.90e-08 | 9 |
trunk paraxial mesoderm | 5.90e-08 | 9 |
musculature of body | 4.67e-07 | 10 |
smooth muscle tissue | 6.90e-07 | 3 |
blood vessel smooth muscle | 6.90e-07 | 3 |
arterial system smooth muscle | 6.90e-07 | 3 |
artery smooth muscle tissue | 6.90e-07 | 3 |
aorta smooth muscle tissue | 6.90e-07 | 3 |
vessel | 9.69e-07 | 5 |
epithelial tube open at both ends | 9.69e-07 | 5 |
blood vessel | 9.69e-07 | 5 |
vasculature | 9.69e-07 | 5 |
vascular system | 9.69e-07 | 5 |
blood vasculature | 9.69e-07 | 5 |
vascular cord | 9.69e-07 | 5 |