FFCP PHASE1:Mm9::chr5:135465906..135465912,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135465906..135465912,+ | |||
|description=CAGE_peak_at_chr5:135465906..135465912,+ | |description=CAGE_peak_at_chr5:135465906..135465912,+ | ||
|id=chr5:135465906..135465912,+ | |id=chr5:135465906..135465912,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.41e-25!25;CL:0002563!6.17e-25!9;CL:0002251!6.17e-25!9;CL:0000075!3.98e-19!7;CL:0000223!2.17e-18!20;CL:0002076!1.92e-17!15;CL:0000239!3.24e-17!6;CL:0000677!3.24e-17!6;CL:0000212!3.24e-17!6;CL:0000584!3.24e-17!6;CL:0002250!2.75e-09!3;CL:0000473!5.42e-09!3;CL:0000627!5.42e-09!3;CL:0000682!5.42e-09!3;CL:0000063!2.21e-07!66 | |ontology_enrichment_celltype=CL:0000066!1.41e-25!25;CL:0002563!6.17e-25!9;CL:0002251!6.17e-25!9;CL:0000075!3.98e-19!7;CL:0000223!2.17e-18!20;CL:0002076!1.92e-17!15;CL:0000239!3.24e-17!6;CL:0000677!3.24e-17!6;CL:0000212!3.24e-17!6;CL:0000584!3.24e-17!6;CL:0002250!2.75e-09!3;CL:0000473!5.42e-09!3;CL:0000627!5.42e-09!3;CL:0000682!5.42e-09!3;CL:0000063!2.21e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.43e-61,9;CL:0002251,2.43e-61,9;CL:0000239,5.18e-52,6;CL:0000677,5.18e-52,6;CL:0000584,5.18e-52,6;CL:0000075,1.30e-44,7;CL:0002076,8.92e-37,15;CL:0000223,4.93e-35,20;CL:0000066,1.48e-34,25;CL:0002250,1.24e-12,3;CL:0000213,1.63e-10,1;CL:0002078,1.63e-10,1;CL:0000115,1.63e-10,1;CL:0002262,1.63e-10,1;CL:1000398,1.63e-10,1;CL:0002321,1.01e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!6.17e-25!9;UBERON:0004808!6.17e-25!9;UBERON:0001277!6.17e-25!9;UBERON:0000344!6.33e-25!15;UBERON:0001242!9.60e-25!13;UBERON:0000060!9.60e-25!13;UBERON:0001262!9.60e-25!13;UBERON:0004786!9.60e-25!13;UBERON:0000485!3.07e-24!11;UBERON:0004923!4.46e-17!24;UBERON:0000160!8.28e-13!43;UBERON:0005409!9.47e-11!59;UBERON:0001007!1.24e-07!128;UBERON:0001555!1.24e-07!128;UBERON:0007026!1.24e-07!128;UBERON:0004119!1.98e-07!130;UBERON:0000925!1.98e-07!130;UBERON:0006595!1.98e-07!130;UBERON:0004921!5.21e-07!126;UBERON:0004185!5.21e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.43e-61,9;UBERON:0004808,2.43e-61,9;UBERON:0001277,2.43e-61,9;UBERON:0000485,3.50e-50,11;UBERON:0001242,1.89e-42,13;UBERON:0001262,1.89e-42,13;UBERON:0004786,1.89e-42,13;UBERON:0000344,8.92e-37,15;UBERON:0004923,6.45e-23,24;UBERON:0000160,1.11e-17,31;UBERON:0003929,1.63e-12,55;UBERON:0005409,1.53e-11,47;UBERON:0002394,1.63e-10,1;UBERON:0001281,1.63e-10,1;UBERON:0000353,1.63e-10,1;UBERON:0003497,1.63e-10,1;UBERON:0003909,1.63e-10,1;UBERON:0003928,1.63e-10,1;UBERON:0003835,1.63e-10,1;UBERON:0003513,1.63e-10,1;UBERON:0001280,1.63e-10,1;UBERON:0004647,1.63e-10,1;UBERON:0002294,1.63e-10,1;UBERON:0001173,1.63e-10,1;UBERON:0004912,1.63e-10,1;UBERON:0005171,1.63e-10,1;UBERON:0000490,2.41e-10,66;UBERON:0005911,7.15e-10,69 | |||
|phase1_expression=0,4.18770489167233,2.72999543633722,9.67885476181856,6.01074875935617,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,2.8711598205751,0.86152399231815,0.646413698057667,0,0,0.443461021310609,0,0,0,4.33277429626912,0.997407872150954,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148505706638,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.18770489167233,2.72999543633722,9.67885476181856,6.01074875935617,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,2.8711598205751,0.86152399231815,0.646413698057667,0,0,0.443461021310609,0,0,0,4.33277429626912,0.997407872150954,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0148505706638,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:135465906..135465912,+ | |short_description=p@chr5:135465906..135465912,+ | ||
}} | }} |
Latest revision as of 10:01, 6 August 2015
Short description: | p@chr5:135465906..135465912, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135465906..135465912, + |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.43e-61 | 9 |
epithelial cell of alimentary canal | 2.43e-61 | 9 |
brush border epithelial cell | 5.18e-52 | 6 |
gut absorptive cell | 5.18e-52 | 6 |
enterocyte | 5.18e-52 | 6 |
columnar/cuboidal epithelial cell | 1.30e-44 | 7 |
endo-epithelial cell | 8.92e-37 | 15 |
endodermal cell | 4.93e-35 | 20 |
epithelial cell | 1.48e-34 | 25 |
intestinal crypt stem cell | 1.24e-12 | 3 |
lining cell | 1.63e-10 | 1 |
meso-epithelial cell | 1.63e-10 | 1 |
endothelial cell | 1.63e-10 | 1 |
endothelial cell of sinusoid | 1.63e-10 | 1 |
endothelial cell of hepatic sinusoid | 1.63e-10 | 1 |
embryonic cell | 1.01e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.43e-61 | 9 |
gastrointestinal system epithelium | 2.43e-61 | 9 |
intestinal epithelium | 2.43e-61 | 9 |
simple columnar epithelium | 3.50e-50 | 11 |
intestinal mucosa | 1.89e-42 | 13 |
wall of intestine | 1.89e-42 | 13 |
gastrointestinal system mucosa | 1.89e-42 | 13 |
mucosa | 8.92e-37 | 15 |
organ component layer | 6.45e-23 | 24 |
intestine | 1.11e-17 | 31 |
gut epithelium | 1.63e-12 | 55 |
gastrointestinal system | 1.53e-11 | 47 |
bile duct | 1.63e-10 | 1 |
hepatic sinusoid | 1.63e-10 | 1 |
parenchyma | 1.63e-10 | 1 |
abdomen blood vessel | 1.63e-10 | 1 |
sinusoid | 1.63e-10 | 1 |
digestive system duct | 1.63e-10 | 1 |
abdominal segment blood vessel | 1.63e-10 | 1 |
trunk blood vessel | 1.63e-10 | 1 |
liver parenchyma | 1.63e-10 | 1 |
liver lobule | 1.63e-10 | 1 |
biliary system | 1.63e-10 | 1 |
biliary tree | 1.63e-10 | 1 |
biliary bud | 1.63e-10 | 1 |
hepatic duct | 1.63e-10 | 1 |
unilaminar epithelium | 2.41e-10 | 66 |
endo-epithelium | 7.15e-10 | 69 |