FFCP PHASE1:Mm9::chr3:38784234..38784253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:38784234..38784253,+ | |||
|description=CAGE_peak_at_chr3:38784234..38784253,+ | |description=CAGE_peak_at_chr3:38784234..38784253,+ | ||
|id=chr3:38784234..38784253,+ | |id=chr3:38784234..38784253,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.22e-07!23;CL:0000337!5.22e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-12,23;CL:0000337,1.43e-12,23;CL:0002609,4.24e-09,6;CL:0000540,7.68e-08,33;CL:0000047,7.68e-08,33;CL:0000031,7.68e-08,33;CL:0000404,7.68e-08,33;CL:0000120,3.07e-07,3;CL:0002612,9.83e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,5.37e-14,7;UBERON:0004710,5.37e-14,7;UBERON:0005419,5.37e-14,7;UBERON:0005417,5.37e-14,7;UBERON:0005729,5.37e-14,7;UBERON:0010708,4.24e-12,8;UBERON:0003056,6.48e-08,49;UBERON:0002346,7.61e-08,64;UBERON:0003075,7.61e-08,64;UBERON:0007284,7.61e-08,64;UBERON:0000026,1.12e-07,12;UBERON:0004708,1.12e-07,12;UBERON:0002101,1.12e-07,12;UBERON:0004357,1.12e-07,12;UBERON:0004347,1.12e-07,12;UBERON:0005732,1.12e-07,12;UBERON:0005733,1.12e-07,12;UBERON:0010707,5.33e-07,13;UBERON:0002257,9.83e-07,3 | |||
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| ||
|short_description=p@chr3:38784234..38784253,+ | |short_description=p@chr3:38784234..38784253,+ | ||
}} | }} |
Latest revision as of 10:27, 6 August 2015
Short description: | p@chr3:38784234..38784253, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:38784234..38784253, + |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-12 | 23 |
neuron of cerebral cortex | 4.24e-09 | 6 |
neuron | 7.68e-08 | 33 |
neuronal stem cell | 7.68e-08 | 33 |
neuroblast | 7.68e-08 | 33 |
electrically signaling cell | 7.68e-08 | 33 |
granule cell | 3.07e-07 | 3 |
neuron of the ventral spinal cord | 9.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
forelimb | 5.37e-14 | 7 |
pectoral appendage | 5.37e-14 | 7 |
pectoral appendage bud | 5.37e-14 | 7 |
forelimb bud | 5.37e-14 | 7 |
forelimb/pectoral fin field | 5.37e-14 | 7 |
pectoral complex | 4.24e-12 | 8 |
pre-chordal neural plate | 6.48e-08 | 49 |
neurectoderm | 7.61e-08 | 64 |
neural plate | 7.61e-08 | 64 |
presumptive neural plate | 7.61e-08 | 64 |
appendage | 1.12e-07 | 12 |
paired limb/fin | 1.12e-07 | 12 |
limb | 1.12e-07 | 12 |
paired limb/fin bud | 1.12e-07 | 12 |
limb bud | 1.12e-07 | 12 |
limb/fin field | 1.12e-07 | 12 |
limb field | 1.12e-07 | 12 |
appendage girdle complex | 5.33e-07 | 13 |
ventral horn of spinal cord | 9.83e-07 | 3 |