FFCP PHASE1:Hg19::chr10:101542384..101542406,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:101542384..101542406,+
|short_description=p2@ABCC2
|description=CAGE_peak_2_at_ABCC2_5end
|association_with_transcript=-56bp_to_NM_000392,uc001kqf.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1244 | |EntrezGene=1244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=53 | |HGNC=53 | ||
|TSSclassifier=strong | |||
|UniProt=Q92887 | |UniProt=Q92887 | ||
|association_with_transcript=-56bp_to_NM_000392,uc001kqf.2_5end | |||
|cluster_id=chr10:101542384..101542406,+ | |||
|coexpression_cluster_id=C2031 | |||
|description=CAGE_peak_2_at_ABCC2_5end | |||
|id=chr10:101542384..101542406,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.56e-16!254;CL:0000223!7.14e-12!59;CL:0000181!1.52e-09!12;CL:0000417!1.52e-09!12;CL:0000668!1.52e-09!12;CL:0000414!1.52e-09!12;CL:0000412!1.52e-09!12;CL:0000182!1.52e-09!12;CL:0000148!2.08e-08!10;CL:0000541!2.08e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.04e-16;12!CL:0000148;5.07e-11;10!CL:0000083;2.74e-10;4!CL:0002567;8.02e-08;3!CL:0000147;1.48e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.58e-18,253;CL:0000182,6.92e-16,12;CL:0000148,5.33e-11,10;CL:0000541,5.33e-11,10;CL:0000223,1.25e-10,58;CL:0000083,2.84e-10,4;CL:0002567,8.52e-08,3;CL:0000147,1.52e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.24e-18;13!UBERON:0004161;2.77e-17;11!UBERON:0008947;2.19e-14;29!UBERON:0003104;2.88e-14;31!UBERON:0001041;6.25e-12;30!UBERON:0006595;5.27e-08;86 | |||
|ontology_enrichment_disease=DOID:0050687!3.61e-24!143;DOID:305!5.73e-24!106;DOID:162!7.72e-13!235;DOID:14566!3.71e-12!239 | |||
|ontology_enrichment_disease_v019=DOID:1793;2.74e-10;4!DOID:305;4.87e-09;106!DOID:170;7.70e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.34e-29,106;DOID:0050687,4.78e-25,143;DOID:162,2.13e-14,235;DOID:14566,7.90e-14,239;DOID:1793,2.84e-10,4;DOID:7,8.21e-08,39;DOID:170,7.88e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.59e-14!9;UBERON:0004921!3.27e-12!129;UBERON:0004185!3.27e-12!129;UBERON:0001041!9.92e-12!98;UBERON:0001007!1.81e-11!155;UBERON:0001555!1.81e-11!155;UBERON:0007026!1.81e-11!155;UBERON:0004119!5.96e-11!169;UBERON:0000925!5.96e-11!169;UBERON:0006595!5.96e-11!169;UBERON:0000077!1.24e-10!130;UBERON:0009497!4.50e-09!25;UBERON:0000015!4.50e-09!25;UBERON:0002423!4.50e-09!25;UBERON:0006235!4.50e-09!25;UBERON:0004161!4.50e-09!25;UBERON:0002107!4.73e-08!19;UBERON:0006925!4.73e-08!19;UBERON:0008836!4.73e-08!19;UBERON:0008835!4.94e-08!22;UBERON:0003894!4.94e-08!22;UBERON:0009854!1.55e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.87e-22;9!UBERON:0001557;2.87e-22;9!UBERON:0002423;2.07e-14;25!UBERON:0002107;3.54e-14;19!UBERON:0006925;3.54e-14;19!UBERON:0000072;3.54e-09;37!UBERON:0002365;5.29e-09;31!UBERON:0002330;5.29e-09;31!UBERON:0000949;1.76e-07;43!UBERON:0000065;4.93e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.14e-22,9;UBERON:0004921,2.11e-16,118;UBERON:0009497,1.95e-14,25;UBERON:0000015,1.95e-14,25;UBERON:0002423,1.95e-14,25;UBERON:0006235,1.95e-14,25;UBERON:0004161,1.95e-14,25;UBERON:0008835,1.99e-14,22;UBERON:0003894,1.99e-14,22;UBERON:0001041,3.25e-14,87;UBERON:0002107,3.52e-14,19;UBERON:0006925,3.52e-14,19;UBERON:0008836,3.52e-14,19;UBERON:0009854,1.14e-13,23;UBERON:0001007,1.80e-13,145;UBERON:0001555,1.80e-13,145;UBERON:0007026,1.80e-13,145;UBERON:0007499,2.45e-12,25;UBERON:0009856,9.50e-12,26;UBERON:0004119,2.52e-11,160;UBERON:0000925,2.52e-11,160;UBERON:0006595,2.52e-11,160;UBERON:0008947,4.18e-10,38;UBERON:0003258,4.18e-10,38;UBERON:0001557,1.71e-09,19;UBERON:0003929,2.12e-09,54;UBERON:0002365,4.12e-09,31;UBERON:0002330,4.12e-09,31;UBERON:0000949,4.72e-09,45;UBERON:0005177,6.52e-09,101;UBERON:0005911,2.12e-08,82;UBERON:0005172,6.11e-08,54;UBERON:0005173,6.11e-08,54;UBERON:0000072,1.60e-07,47;UBERON:0002417,8.92e-07,60;UBERON:0000916,8.92e-07,60 | |||
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| ||
|short_description=p2@ABCC2 | |||
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Latest revision as of 19:16, 15 September 2015
Short description: | p2@ABCC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCC2_5end |
Coexpression cluster: | C2031_bile_lung_large_epitheloid_mesothelioma_hepatoma_maxillary |
Association with transcript: | -56bp_to_NM_000392, uc001kqf.2_5end |
EntrezGene: | ABCC2 |
HGNC: | 53 |
UniProt: | Q92887 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.58e-18 | 253 |
hepatocyte | 6.92e-16 | 12 |
melanocyte | 5.33e-11 | 10 |
melanoblast | 5.33e-11 | 10 |
endodermal cell | 1.25e-10 | 58 |
epithelial cell of pancreas | 2.84e-10 | 4 |
light melanocyte | 8.52e-08 | 3 |
pigment cell | 1.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.34e-29 | 106 |
cell type cancer | 4.78e-25 | 143 |
cancer | 2.13e-14 | 235 |
disease of cellular proliferation | 7.90e-14 | 239 |
pancreatic cancer | 2.84e-10 | 4 |
disease of anatomical entity | 8.21e-08 | 39 |
endocrine gland cancer | 7.88e-07 | 6 |