FFCP PHASE1:Hg19::chr7:11676048..11676067,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:11676048..11676067,-
|short_description=p23@THSD7A
|description=CAGE_peak_23_at_THSD7A_5end
|association_with_transcript=246bp_to_AB023177_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221981 | |EntrezGene=221981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22207 | |HGNC=22207 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPZ6 | |UniProt=Q9UPZ6 | ||
|association_with_transcript=246bp_to_AB023177_5end | |||
|cluster_id=chr7:11676048..11676067,- | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_23_at_THSD7A_5end | |||
|id=chr7:11676048..11676067,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.78e-14!57;UBERON:0005068!6.78e-14!57;UBERON:0006241!6.78e-14!57;UBERON:0007135!6.78e-14!57;UBERON:0007023!2.12e-11!115;UBERON:0002616!2.35e-11!59;UBERON:0001871!3.00e-10!7;UBERON:0002780!3.34e-10!41;UBERON:0001890!3.34e-10!41;UBERON:0006240!3.34e-10!41;UBERON:0002020!4.32e-10!34;UBERON:0003528!4.32e-10!34;UBERON:0003080!6.36e-10!42;UBERON:0002619!9.83e-10!22;UBERON:0003075!1.03e-09!86;UBERON:0007284!1.03e-09!86;UBERON:0000955!3.42e-09!69;UBERON:0006238!3.42e-09!69;UBERON:0002346!3.77e-09!90;UBERON:0001017!1.06e-08!82;UBERON:0001869!1.47e-08!32;UBERON:0000956!1.66e-08!25;UBERON:0000203!1.66e-08!25;UBERON:0002791!2.85e-08!33;UBERON:0005743!3.54e-08!86;UBERON:0001950!5.27e-08!20;UBERON:0001893!5.32e-08!34;UBERON:0002771!7.53e-08!3;UBERON:0000988!2.27e-07!3;UBERON:0000073!3.67e-07!94;UBERON:0001016!3.67e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;4.52e-50;2!UBERON:0006514;4.52e-50;2!UBERON:0009663;1.91e-15;7!UBERON:0002420;2.45e-12;9!UBERON:0000125;2.45e-12;9!UBERON:0007245;2.45e-12;9!UBERON:0002308;2.45e-12;9!UBERON:0010009;2.45e-12;9!UBERON:0010011;2.45e-12;9!UBERON:0000454;2.45e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,4.52e-50,2;UBERON:0006514,4.52e-50,2;UBERON:0009663,1.91e-15,7;UBERON:0002420,2.45e-12,9;UBERON:0000125,2.45e-12,9;UBERON:0007245,2.45e-12,9;UBERON:0002308,2.45e-12,9;UBERON:0010009,2.45e-12,9;UBERON:0010011,2.45e-12,9;UBERON:0000454,2.45e-12,9 | |||
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|short_description=p23@THSD7A | |||
}} | }} |
Latest revision as of 19:25, 15 September 2015
Short description: | p23@THSD7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_THSD7A_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 246bp_to_AB023177_5end |
EntrezGene: | THSD7A |
HGNC: | 22207 |
UniProt: | Q9UPZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
globus pallidus | 4.52e-50 | 2 |
pallidum | 4.52e-50 | 2 |
telencephalic nucleus | 1.91e-15 | 7 |
basal ganglion | 2.45e-12 | 9 |
neural nucleus | 2.45e-12 | 9 |
nuclear complex of neuraxis | 2.45e-12 | 9 |
nucleus of brain | 2.45e-12 | 9 |
aggregate regional part of brain | 2.45e-12 | 9 |
collection of basal ganglia | 2.45e-12 | 9 |
cerebral subcortex | 2.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |