FFCP PHASE1:Hg19::chrX:48644976..48644983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2623 | |EntrezGene=2623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4170 | |HGNC=4170 | ||
|TSSclassifier=strong | |||
|UniProt=B7WNQ9,P15976 | |UniProt=B7WNQ9,P15976 | ||
|association_with_transcript=0bp_to_ENST00000376665,NM_002049,uc004dkq.3_5end | |association_with_transcript=0bp_to_ENST00000376665,NM_002049,uc004dkq.3_5end | ||
|cluster_id=chrX:48644976..48644983,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_GATA1_5end | |description=CAGE_peak_2_at_GATA1_5end | ||
|id=chrX:48644976..48644983,+ | |id=chrX:48644976..48644983,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.02e-17!5;CL:0000457!1.02e-17!5;CL:0002191!1.02e-17!5;CL:0000097!1.02e-17!5;CL:0000831!1.02e-17!5;CL:0002028!1.02e-17!5;CL:0000763!9.73e-12!112;CL:0000049!9.73e-12!112;CL:0000767!1.61e-10!3;CL:0000163!1.12e-09!9;CL:0000037!1.89e-09!172;CL:0000566!1.89e-09!172;CL:0000764!1.22e-08!2;CL:0000765!1.22e-08!2;CL:0000050!1.22e-08!2;CL:0000038!1.22e-08!2;CL:0000558!1.22e-08!2;CL:0000547!1.22e-08!2;CL:0000549!1.22e-08!2;CL:0000550!1.22e-08!2;CL:0000552!1.22e-08!2;CL:0000988!1.46e-08!182;CL:0002032!1.27e-07!165;CL:0000837!1.27e-07!165 | |ontology_enrichment_celltype=CL:0002274!1.02e-17!5;CL:0000457!1.02e-17!5;CL:0002191!1.02e-17!5;CL:0000097!1.02e-17!5;CL:0000831!1.02e-17!5;CL:0002028!1.02e-17!5;CL:0000763!9.73e-12!112;CL:0000049!9.73e-12!112;CL:0000767!1.61e-10!3;CL:0000163!1.12e-09!9;CL:0000037!1.89e-09!172;CL:0000566!1.89e-09!172;CL:0000764!1.22e-08!2;CL:0000765!1.22e-08!2;CL:0000050!1.22e-08!2;CL:0000038!1.22e-08!2;CL:0000558!1.22e-08!2;CL:0000547!1.22e-08!2;CL:0000549!1.22e-08!2;CL:0000550!1.22e-08!2;CL:0000552!1.22e-08!2;CL:0000988!1.46e-08!182;CL:0002032!1.27e-07!165;CL:0000837!1.27e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.26e-31;5!CL:0000163;3.50e-17;9!CL:0000764;1.82e-14;2!CL:0000558;1.82e-14;2!CL:0000037;2.98e-07;1!CL:0001024;2.98e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.64e-31,5;CL:0002028,4.64e-31,5;CL:0000163,3.27e-17,9;CL:0000763,2.56e-15,108;CL:0000049,2.56e-15,108;CL:0000764,1.82e-14,2;CL:0000765,1.82e-14,2;CL:0000050,1.82e-14,2;CL:0000038,1.82e-14,2;CL:0000558,1.82e-14,2;CL:0000547,1.82e-14,2;CL:0000549,1.82e-14,2;CL:0000550,1.82e-14,2;CL:0000552,1.82e-14,2;CL:0000037,1.03e-09,168;CL:0002032,4.24e-09,161;CL:0000837,4.24e-09,161;CL:0000988,5.02e-09,177;CL:0001024,3.17e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.34e-21!8;DOID:8692!1.55e-16!31;DOID:1240!1.80e-14!39;DOID:2531!2.79e-10!51;DOID:0060083!2.79e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.77e-29;8!DOID:8692;1.10e-22;31!DOID:1240;3.69e-14;39!DOID:2531;6.75e-10;51!DOID:0060083;6.75e-10;51!DOID:8552;8.28e-08;1!DOID:9119;2.98e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.77e-29,8;DOID:8692,3.92e-23,31;DOID:1240,5.74e-18,39;DOID:2531,2.95e-13,51;DOID:0060083,2.95e-13,51;DOID:8552,8.28e-08,1;DOID:9119,2.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.46e-21!15;UBERON:0000179!7.46e-21!15;UBERON:0000463!7.46e-21!15;UBERON:0002390!3.21e-07!102;UBERON:0003061!3.21e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!7.46e-21!15;UBERON:0000179!7.46e-21!15;UBERON:0000463!7.46e-21!15;UBERON:0002390!3.21e-07!102;UBERON:0003061!3.21e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.16e-25;15!UBERON:0000179;6.16e-25;15!UBERON:0000463;6.16e-25;15!UBERON:0002390;2.12e-16;32!UBERON:0002193;2.19e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.58e-25,15;UBERON:0000179,6.58e-25,15;UBERON:0000463,6.58e-25,15;UBERON:0002390,6.95e-11,98;UBERON:0003061,6.95e-11,98;UBERON:0002193,1.28e-09,108 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,5.28685314316103,3.92355994087075,7.63813845847723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8826118063351,5.89924507888615,1.65862492432618,6.48539790376326,5.6809095041871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.343817302852,44.705462125258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,3.82318603571188,6.83576624608995,2.1440859791201,3.70226045777575,2.59389324477087,4.32025149790492,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92349595790849,14.0636952807511,1.33228787199128,14.098700508785,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,12.1334527787114,15.7916962432026,15.0968151424659,16.6143371106084,16.6983284797283,17.0062139509005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,9.686917448422,0,0,0,13.2506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,2.38494185502236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.639701945702943,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@GATA1 | |short_description=p2@GATA1 | ||
}} | }} |
Latest revision as of 19:49, 15 September 2015
Short description: | p2@GATA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATA1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000376665, NM_002049, uc004dkq.3_5end |
EntrezGene: | GATA1 |
HGNC: | 4170 |
UniProt: | B7WNQ9P15976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.64e-31 | 5 |
basophil mast progenitor cell | 4.64e-31 | 5 |
endocrine cell | 3.27e-17 | 9 |
myeloid cell | 2.56e-15 | 108 |
common myeloid progenitor | 2.56e-15 | 108 |
erythroid lineage cell | 1.82e-14 | 2 |
erythroblast | 1.82e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.82e-14 | 2 |
erythroid progenitor cell | 1.82e-14 | 2 |
reticulocyte | 1.82e-14 | 2 |
proerythroblast | 1.82e-14 | 2 |
basophilic erythroblast | 1.82e-14 | 2 |
polychromatophilic erythroblast | 1.82e-14 | 2 |
orthochromatic erythroblast | 1.82e-14 | 2 |
hematopoietic stem cell | 1.03e-09 | 168 |
hematopoietic oligopotent progenitor cell | 4.24e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-09 | 161 |
hematopoietic cell | 5.02e-09 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.17e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 6.58e-25 | 15 |
haemolymphatic fluid | 6.58e-25 | 15 |
organism substance | 6.58e-25 | 15 |
hematopoietic system | 6.95e-11 | 98 |
blood island | 6.95e-11 | 98 |
hemolymphoid system | 1.28e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.77e-29 | 8 |
myeloid leukemia | 3.92e-23 | 31 |
leukemia | 5.74e-18 | 39 |
hematologic cancer | 2.95e-13 | 51 |
immune system cancer | 2.95e-13 | 51 |
chronic myeloid leukemia | 8.28e-08 | 1 |
acute myeloid leukemia | 2.98e-07 | 1 |