FFCP PHASE1:Hg19::chrX:48645010..48645015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2623 | |EntrezGene=2623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4170 | |HGNC=4170 | ||
|TSSclassifier=strong | |||
|UniProt=P15976 | |UniProt=P15976 | ||
|association_with_transcript=28bp_to_NM_002049,uc004dkq.3_5end | |association_with_transcript=28bp_to_NM_002049,uc004dkq.3_5end | ||
|cluster_id=chrX:48645010..48645015,+ | |||
|coexpression_cluster_id=C2846 | |coexpression_cluster_id=C2846 | ||
|description=CAGE_peak_3_at_GATA1_5end | |description=CAGE_peak_3_at_GATA1_5end | ||
|id=chrX:48645010..48645015,+ | |id=chrX:48645010..48645015,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.51e-22!5;CL:0000457!1.51e-22!5;CL:0002191!1.51e-22!5;CL:0000097!1.51e-22!5;CL:0000831!1.51e-22!5;CL:0002028!1.51e-22!5;CL:0000763!2.24e-20!112;CL:0000049!2.24e-20!112;CL:0000163!2.11e-12!9;CL:0000037!2.85e-12!172;CL:0000566!2.85e-12!172;CL:0002032!6.59e-12!165;CL:0000837!6.59e-12!165;CL:0000988!2.92e-11!182;CL:0000764!2.42e-10!2;CL:0000765!2.42e-10!2;CL:0000050!2.42e-10!2;CL:0000038!2.42e-10!2;CL:0000558!2.42e-10!2;CL:0000547!2.42e-10!2;CL:0000549!2.42e-10!2;CL:0000550!2.42e-10!2;CL:0000552!2.42e-10!2 | |ontology_enrichment_celltype=CL:0002274!1.51e-22!5;CL:0000457!1.51e-22!5;CL:0002191!1.51e-22!5;CL:0000097!1.51e-22!5;CL:0000831!1.51e-22!5;CL:0002028!1.51e-22!5;CL:0000763!2.24e-20!112;CL:0000049!2.24e-20!112;CL:0000163!2.11e-12!9;CL:0000037!2.85e-12!172;CL:0000566!2.85e-12!172;CL:0002032!6.59e-12!165;CL:0000837!6.59e-12!165;CL:0000988!2.92e-11!182;CL:0000764!2.42e-10!2;CL:0000765!2.42e-10!2;CL:0000050!2.42e-10!2;CL:0000038!2.42e-10!2;CL:0000558!2.42e-10!2;CL:0000547!2.42e-10!2;CL:0000549!2.42e-10!2;CL:0000550!2.42e-10!2;CL:0000552!2.42e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.06e-39;5!CL:0000163;4.68e-22;9!CL:0000764;1.83e-17;2!CL:0000558;1.83e-17;2!CL:0000763;3.52e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.06e-39,5;CL:0002028,1.06e-39,5;CL:0000163,4.68e-22,9;CL:0000763,7.11e-21,108;CL:0000049,7.11e-21,108;CL:0000764,1.76e-17,2;CL:0000765,1.76e-17,2;CL:0000050,1.76e-17,2;CL:0000038,1.76e-17,2;CL:0000558,1.76e-17,2;CL:0000547,1.76e-17,2;CL:0000549,1.76e-17,2;CL:0000550,1.76e-17,2;CL:0000552,1.76e-17,2;CL:0002032,5.48e-13,161;CL:0000837,5.48e-13,161;CL:0000037,2.58e-12,168;CL:0000988,1.59e-11,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.71e-27!8;DOID:8692!2.58e-25!31;DOID:1240!1.88e-19!39;DOID:2531!4.06e-14!51;DOID:0060083!4.06e-14!51 | |ontology_enrichment_disease=DOID:1036!1.71e-27!8;DOID:8692!2.58e-25!31;DOID:1240!1.88e-19!39;DOID:2531!4.06e-14!51;DOID:0060083!4.06e-14!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-36;8!DOID:8692;3.40e-24;31!DOID:1240;1.81e-15;39!DOID:2531;2.97e-10;51!DOID:0060083;2.97e-10;51!DOID:8552;1.69e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.08e-36,8;DOID:8692,8.89e-25,31;DOID:1240,2.26e-19,39;DOID:2531,1.94e-14,51;DOID:0060083,1.94e-14,51;DOID:8552,1.69e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.90e-10!15;UBERON:0000179!7.90e-10!15;UBERON:0000463!7.90e-10!15;UBERON:0002390!4.37e-08!102;UBERON:0003061!4.37e-08!102;UBERON:0002193!4.85e-08!112 | |ontology_enrichment_uberon=UBERON:0000178!7.90e-10!15;UBERON:0000179!7.90e-10!15;UBERON:0000463!7.90e-10!15;UBERON:0002390!4.37e-08!102;UBERON:0003061!4.37e-08!102;UBERON:0002193!4.85e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-08;15!UBERON:0000179;1.81e-08;15!UBERON:0000463;1.81e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.90e-08,15;UBERON:0000179,1.90e-08,15;UBERON:0000463,1.90e-08,15 | |||
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| ||
|short_description=p3@GATA1 | |short_description=p3@GATA1 | ||
}} | }} |
Latest revision as of 19:52, 15 September 2015
Short description: | p3@GATA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GATA1_5end |
Coexpression cluster: | C2846_Mast_chronic_leukemia_acute_blood_Reticulocytes_Whole |
Association with transcript: | 28bp_to_NM_002049, uc004dkq.3_5end |
EntrezGene: | GATA1 |
HGNC: | 4170 |
UniProt: | P15976 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.06e-39 | 5 |
basophil mast progenitor cell | 1.06e-39 | 5 |
endocrine cell | 4.68e-22 | 9 |
myeloid cell | 7.11e-21 | 108 |
common myeloid progenitor | 7.11e-21 | 108 |
erythroid lineage cell | 1.76e-17 | 2 |
erythroblast | 1.76e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 1.76e-17 | 2 |
erythroid progenitor cell | 1.76e-17 | 2 |
reticulocyte | 1.76e-17 | 2 |
proerythroblast | 1.76e-17 | 2 |
basophilic erythroblast | 1.76e-17 | 2 |
polychromatophilic erythroblast | 1.76e-17 | 2 |
orthochromatic erythroblast | 1.76e-17 | 2 |
hematopoietic oligopotent progenitor cell | 5.48e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.48e-13 | 161 |
hematopoietic stem cell | 2.58e-12 | 168 |
hematopoietic cell | 1.59e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.90e-08 | 15 |
haemolymphatic fluid | 1.90e-08 | 15 |
organism substance | 1.90e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.08e-36 | 8 |
myeloid leukemia | 8.89e-25 | 31 |
leukemia | 2.26e-19 | 39 |
hematologic cancer | 1.94e-14 | 51 |
immune system cancer | 1.94e-14 | 51 |
chronic myeloid leukemia | 1.69e-09 | 1 |