FFCP PHASE1:Hg19::chr10:102046417..102046465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=282991 | |EntrezGene=282991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20984 | |HGNC=20984 | ||
|TSSclassifier=strong | |||
|UniProt=Q6QNY1,F1T0F0 | |UniProt=Q6QNY1,F1T0F0 | ||
|association_with_transcript=0bp_to_ENST00000358848,ENST00000370372,NM_173809,uc001kqw.1_5end | |||
|cluster_id=chr10:102046417..102046465,- | |||
|description=CAGE_peak_1_at_BLOC1S2_5end | |||
|id=chr10:102046417..102046465,- | |||
|ontology_enrichment_celltype=CL:0000738!1.66e-37!140;CL:0002031!4.52e-34!124;CL:0002087!2.51e-33!119;CL:0000766!7.77e-28!76;CL:0002009!5.40e-26!65;CL:0000037!6.54e-26!172;CL:0000566!6.54e-26!172;CL:0002032!2.99e-25!165;CL:0000837!2.99e-25!165;CL:0002194!5.95e-25!63;CL:0000576!5.95e-25!63;CL:0000040!5.95e-25!63;CL:0000559!5.95e-25!63;CL:0000839!2.00e-24!70;CL:0000557!8.42e-24!71;CL:0002057!2.15e-23!42;CL:0000988!9.79e-23!182;CL:0000860!9.86e-23!45;CL:0000763!5.36e-16!112;CL:0000049!5.36e-16!112;CL:0000838!2.92e-09!52;CL:0000542!6.08e-09!53;CL:0000051!6.08e-09!53;CL:0000134!3.67e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.11e-18;33!CL:0002057;6.11e-18;33!CL:0000473;8.41e-18;39!CL:0000234;8.41e-18;39!CL:0000576;3.76e-15;48!CL:0000766;2.28e-12;69!CL:0002087;1.35e-09;104!CL:0000738;3.50e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.63e-38,136;CL:0002031,1.14e-34,120;CL:0002087,5.98e-34,115;CL:0000766,8.56e-29,72;CL:0002009,4.42e-27,61;CL:0000473,6.77e-27,48;CL:0000234,6.77e-27,48;CL:0000037,3.99e-26,168;CL:0002194,4.98e-26,59;CL:0000576,4.98e-26,59;CL:0000040,4.98e-26,59;CL:0000559,4.98e-26,59;CL:0002032,1.77e-25,161;CL:0000837,1.77e-25,161;CL:0000839,2.46e-25,66;CL:0000557,1.15e-24,67;CL:0000860,2.15e-23,42;CL:0002057,2.15e-23,42;CL:0000988,2.66e-23,177;CL:0000763,3.06e-16,108;CL:0000049,3.06e-16,108;CL:0000838,2.92e-09,52;CL:0000542,6.08e-09,53;CL:0000051,6.08e-09,53;CL:0000134,3.71e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.12e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-22!102;UBERON:0003061!1.70e-22!102;UBERON:0002371!3.65e-21!80;UBERON:0002193!2.90e-20!112;UBERON:0001474!1.97e-19!86;UBERON:0004765!1.18e-17!101;UBERON:0001434!1.18e-17!101;UBERON:0002405!1.57e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.75e-23,98;UBERON:0003061,5.75e-23,98;UBERON:0002371,8.62e-22,76;UBERON:0002193,1.30e-20,108;UBERON:0001474,6.19e-20,82;UBERON:0004765,7.85e-19,90;UBERON:0002405,8.27e-18,93;UBERON:0001434,1.10e-16,100 | |||
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| ||
|short_description=p1@BLOC1S2 | |||
}} | }} |
Latest revision as of 20:14, 15 September 2015
Short description: | p1@BLOC1S2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BLOC1S2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358848, ENST00000370372, NM_173809, uc001kqw.1_5end |
EntrezGene: | BLOC1S2 |
HGNC: | 20984 |
UniProt: | Q6QNY1F1T0F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.63e-38 | 136 |
hematopoietic lineage restricted progenitor cell | 1.14e-34 | 120 |
nongranular leukocyte | 5.98e-34 | 115 |
myeloid leukocyte | 8.56e-29 | 72 |
macrophage dendritic cell progenitor | 4.42e-27 | 61 |
defensive cell | 6.77e-27 | 48 |
phagocyte | 6.77e-27 | 48 |
hematopoietic stem cell | 3.99e-26 | 168 |
monopoietic cell | 4.98e-26 | 59 |
monocyte | 4.98e-26 | 59 |
monoblast | 4.98e-26 | 59 |
promonocyte | 4.98e-26 | 59 |
hematopoietic oligopotent progenitor cell | 1.77e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-25 | 161 |
myeloid lineage restricted progenitor cell | 2.46e-25 | 66 |
granulocyte monocyte progenitor cell | 1.15e-24 | 67 |
classical monocyte | 2.15e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.15e-23 | 42 |
hematopoietic cell | 2.66e-23 | 177 |
myeloid cell | 3.06e-16 | 108 |
common myeloid progenitor | 3.06e-16 | 108 |
lymphoid lineage restricted progenitor cell | 2.92e-09 | 52 |
lymphocyte | 6.08e-09 | 53 |
common lymphoid progenitor | 6.08e-09 | 53 |
mesenchymal cell | 3.71e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.75e-23 | 98 |
blood island | 5.75e-23 | 98 |
bone marrow | 8.62e-22 | 76 |
hemolymphoid system | 1.30e-20 | 108 |
bone element | 6.19e-20 | 82 |
skeletal element | 7.85e-19 | 90 |
immune system | 8.27e-18 | 93 |
skeletal system | 1.10e-16 | 100 |