FFCP PHASE1:Hg19::chr9:13165441..13165450,-: Difference between revisions
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|id=chr9:13165441..13165450,-
|short_description=p20@MPDZ
|description=CAGE_peak_20_at_MPDZ_5end
|association_with_transcript=0bp_to_uc011lmm.1_5end
|EntrezGene=87...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8777 | |EntrezGene=8777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7208 | |HGNC=7208 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011lmm.1_5end | |||
|cluster_id=chr9:13165441..13165450,- | |||
|coexpression_cluster_id=C735 | |||
|description=CAGE_peak_20_at_MPDZ_5end | |||
|id=chr9:13165441..13165450,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p20@MPDZ | |||
}} | }} |
Latest revision as of 21:03, 15 September 2015
Short description: | p20@MPDZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MPDZ_5end |
Coexpression cluster: | C735_hippocampus_medial_olfactory_amygdala_occipital_insula_middle |
Association with transcript: | 0bp_to_uc011lmm.1_5end |
EntrezGene: | MPDZ |
HGNC: | 7208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 3.30e-40 | 1 |
limbic system | 1.44e-32 | 5 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
Ammon's horn | 3.11e-21 | 2 |
lobe parts of cerebral cortex | 3.11e-21 | 2 |
hippocampal formation | 3.11e-21 | 2 |
limbic lobe | 3.11e-21 | 2 |
amygdala | 5.70e-21 | 2 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
neocortex | 1.10e-17 | 20 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
nervous system | 2.13e-11 | 89 |
pre-chordal neural plate | 6.84e-11 | 61 |
occipital lobe | 2.97e-09 | 5 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
neurectoderm | 6.09e-08 | 86 |
temporal lobe | 6.04e-07 | 6 |