FFCP PHASE1:Hg19::chr2:233404395..233404408,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1967 | |||
|TSSclassifier=strong | |||
|UniProt=P07510,Q14DU4 | |||
|association_with_transcript=-28bp_to_ENST00000389494,ENST00000485094,ENST00000541596,NM_005199,uc002vsx.1,uc010fyd.2,uc010fye.1_5end | |||
|cluster_id=chr2:233404395..233404408,+ | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_2_at_CHRNG_5end | |||
|id=chr2:233404395..233404408,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.74e-28!9;CL:0000594!8.80e-13!3;CL:0002575!4.79e-09!2;CL:0000680!5.27e-09!57;CL:0000056!5.27e-09!57;CL:0000355!5.27e-09!57;CL:0000183!1.06e-08!59;CL:0000187!7.75e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000188;8.22e-67;9!CL:0000594;1.45e-17;3!CL:0000187;2.04e-08;55!CL:0000680;4.66e-08;7!CL:0000393;8.10e-08;61!CL:0000211;8.10e-08;61!CL:0002575;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,8.22e-67,9;CL:0000594,1.39e-17,3;CL:0000187,1.57e-10,55;CL:0000680,5.89e-10,58;CL:0000056,5.89e-10,58;CL:0000355,5.89e-10,58;CL:0000393,1.95e-09,61;CL:0000211,1.95e-09,61;CL:0002575,1.05e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.95e-13;1!CL:0000355;1.02e-07;58!UBERON:0007297;1.54e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.80e-15!61;UBERON:0002036!3.80e-15!61;UBERON:0003082!3.80e-15!61;UBERON:0002385!1.55e-14!63;UBERON:0001015!1.55e-14!63;UBERON:0000383!1.55e-14!63;UBERON:0004290!1.13e-12!70;UBERON:0000914!2.10e-11!83;UBERON:0002329!2.10e-11!83;UBERON:0003077!2.10e-11!83;UBERON:0003059!2.10e-11!83;UBERON:0007282!2.10e-11!83;UBERON:0009618!2.10e-11!83;UBERON:0007285!2.10e-11!83;UBERON:0003104!4.51e-11!238;UBERON:0009142!4.51e-11!238;UBERON:0000486!3.09e-10!82;UBERON:0001630!1.54e-09!2;UBERON:0005090!1.54e-09!2;UBERON:0002100!3.17e-09!216;UBERON:0005256!3.23e-09!143;UBERON:0000341!4.99e-09!2;UBERON:0000490!1.19e-08!138;UBERON:0003127!1.24e-08!2;UBERON:0004177!1.55e-08!7;UBERON:0000475!7.44e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.97e-92;16!UBERON:0002036;1.97e-92;16!UBERON:0002385;2.95e-46;31!UBERON:0001015;2.95e-46;31!UBERON:0000383;2.95e-46;31!UBERON:0005090;6.35e-26;2!UBERON:0001630;6.35e-26;2!UBERON:0001389;4.53e-14;1!UBERON:0000026;4.53e-14;1!UBERON:0008784;4.53e-14;1!UBERON:0006058;4.53e-14;1!UBERON:0003663;4.53e-14;1!UBERON:0004256;4.53e-14;1!UBERON:0004708;4.53e-14;1!UBERON:0002101;4.53e-14;1!UBERON:0004709;4.53e-14;1!UBERON:0002529;4.53e-14;1!UBERON:0010538;4.53e-14;1!UBERON:0003661;4.53e-14;1!UBERON:0010890;4.53e-14;1!UBERON:0002471;4.53e-14;1!UBERON:0001383;4.53e-14;1!UBERON:0010758;4.53e-14;1!UBERON:0010707;4.53e-14;1!UBERON:0000978;4.53e-14;1!UBERON:0002103;4.53e-14;1!UBERON:0001665;4.53e-14;1!UBERON:0003823;4.53e-14;1!UBERON:0000154;4.53e-14;1!UBERON:0010709;4.53e-14;1!UBERON:0001301;8.58e-14;1!UBERON:0002426;1.18e-13;1!UBERON:0003831;1.18e-13;1!UBERON:0003898;1.18e-13;1!UBERON:0004830;1.18e-13;1!UBERON:0003830;1.18e-13;1!UBERON:0005175;1.18e-13;1!UBERON:0001774;1.18e-13;1!UBERON:0001103;1.18e-13;1!UBERON:0000989;1.95e-13;1!UBERON:0008811;1.95e-13;1!UBERON:0002204;8.88e-11;70!UBERON:0000341;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,5.96e-26,2;UBERON:0001630,5.96e-26,2;UBERON:0001134,5.30e-23,62;UBERON:0002036,5.30e-23,62;UBERON:0003082,5.30e-23,62;UBERON:0002385,3.04e-22,64;UBERON:0001015,3.04e-22,64;UBERON:0000383,3.04e-22,64;UBERON:0002329,6.34e-20,71;UBERON:0003059,6.34e-20,71;UBERON:0007282,6.34e-20,71;UBERON:0004290,6.34e-20,71;UBERON:0009618,6.34e-20,71;UBERON:0003077,1.25e-19,72;UBERON:0007285,1.25e-19,72;UBERON:0007524,2.42e-19,73;UBERON:0005256,2.61e-18,122;UBERON:0007503,5.09e-18,78;UBERON:0000486,7.44e-17,83;UBERON:0005418,4.53e-14,1;UBERON:0001389,4.53e-14,1;UBERON:0000026,4.53e-14,1;UBERON:0008784,4.53e-14,1;UBERON:0006058,4.53e-14,1;UBERON:0003663,4.53e-14,1;UBERON:0004256,4.53e-14,1;UBERON:0004708,4.53e-14,1;UBERON:0002101,4.53e-14,1;UBERON:0004709,4.53e-14,1;UBERON:0002529,4.53e-14,1;UBERON:0010538,4.53e-14,1;UBERON:0003661,4.53e-14,1;UBERON:0010890,4.53e-14,1;UBERON:0002471,4.53e-14,1;UBERON:0001383,4.53e-14,1;UBERON:0004357,4.53e-14,1;UBERON:0004347,4.53e-14,1;UBERON:0005420,4.53e-14,1;UBERON:0005732,4.53e-14,1;UBERON:0010758,4.53e-14,1;UBERON:0010707,4.53e-14,1;UBERON:0000978,4.53e-14,1;UBERON:0002103,4.53e-14,1;UBERON:0001665,4.53e-14,1;UBERON:0003823,4.53e-14,1;UBERON:0000154,4.53e-14,1;UBERON:0010709,4.53e-14,1;UBERON:0005733,4.53e-14,1;UBERON:0005730,4.53e-14,1;UBERON:0001301,8.58e-14,1;UBERON:0002426,1.10e-13,1;UBERON:0003831,1.10e-13,1;UBERON:0003898,1.10e-13,1;UBERON:0004830,1.10e-13,1;UBERON:0003830,1.10e-13,1;UBERON:0005175,1.10e-13,1;UBERON:0001774,1.10e-13,1;UBERON:0001103,1.10e-13,1;UBERON:0010084,1.10e-13,1;UBERON:0003104,1.47e-13,160;UBERON:0009142,1.47e-13,160;UBERON:0000989,1.83e-13,1;UBERON:0008811,1.83e-13,1;UBERON:0006258,1.83e-13,1;UBERON:0005876,1.83e-13,1;UBERON:0004874,1.83e-13,1;UBERON:0000490,1.23e-10,148;UBERON:0002100,1.48e-10,199;UBERON:0002204,1.29e-07,167;UBERON:0000341,2.12e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,28.8240476001119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5038154767625,1.23238893691716,3.83759186815324,10.0620697913707,0.107420244868274,5.22060098091223,7.75562309486518,54.0424456375696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.30114790657,7.39172209364979,42.9131339595134,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,2.3806443146374,0.0645889098360061,0.434523000071005,0,0,0.202117188958219,0.653150243690884,0.684466602170562,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CHRNG | |||
}} |
Latest revision as of 21:49, 15 September 2015
Short description: | p2@CHRNG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHRNG_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | -28bp_to_ENST00000389494, ENST00000485094, ENST00000541596, NM_005199, uc002vsx.1, uc010fyd.2, uc010fye.1_5end |
EntrezGene: | CHRNG |
HGNC: | 1967 |
UniProt: | P07510Q14DU4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 8.22e-67 | 9 |
skeletal muscle satellite cell | 1.39e-17 | 3 |
muscle cell | 1.57e-10 | 55 |
muscle precursor cell | 5.89e-10 | 58 |
myoblast | 5.89e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.89e-10 | 58 |
electrically responsive cell | 1.95e-09 | 61 |
electrically active cell | 1.95e-09 | 61 |
central nervous system pericyte | 1.05e-07 | 2 |