FFCP PHASE1:Hg19::chr11:117668248..117668250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57453 | |EntrezGene=57453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14656 | |HGNC=14656 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TD84 | |UniProt=Q8TD84 | ||
|association_with_transcript=-272bp_to_ENST00000321322,NM_020693,uc001prh.1_5end | |association_with_transcript=-272bp_to_ENST00000321322,NM_020693,uc001prh.1_5end | ||
|cluster_id=chr11:117668248..117668250,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_5_at_DSCAML1_5end | |description=CAGE_peak_5_at_DSCAML1_5end | ||
|id=chr11:117668248..117668250,- | |id=chr11:117668248..117668250,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-87;3!UBERON:0005425;1.71e-66;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@DSCAML1 | |short_description=p5@DSCAML1 | ||
}} | }} |
Latest revision as of 21:54, 15 September 2015
Short description: | p5@DSCAML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSCAML1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -272bp_to_ENST00000321322, NM_020693, uc001prh.1_5end |
EntrezGene: | DSCAML1 |
HGNC: | 14656 |
UniProt: | Q8TD84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.23e-66 | 1 |
cranial nerve | 1.23e-66 | 1 |
nerve trunk | 1.23e-66 | 1 |
nerve connecting eye with brain | 1.23e-66 | 1 |
nerve | 1.23e-66 | 1 |
retinal neural layer | 1.23e-66 | 1 |
presumptive neural retina | 1.23e-66 | 1 |
retina | 1.22e-44 | 6 |
photoreceptor array | 1.22e-44 | 6 |
posterior segment of eyeball | 1.22e-44 | 6 |
neural tissue | 3.61e-34 | 2 |
multi cell component structure | 3.61e-34 | 2 |
neuron projection bundle | 3.61e-34 | 2 |
eye | 3.84e-29 | 21 |
visual system | 3.84e-29 | 21 |
sense organ | 1.16e-25 | 24 |
sensory system | 1.16e-25 | 24 |
entire sense organ system | 1.16e-25 | 24 |
layer of retina | 7.35e-18 | 4 |
camera-type eye | 2.58e-14 | 20 |
simple eye | 2.58e-14 | 20 |
immature eye | 2.58e-14 | 20 |
ocular region | 2.58e-14 | 20 |
eyeball of camera-type eye | 2.58e-14 | 20 |
optic cup | 2.58e-14 | 20 |
optic vesicle | 2.58e-14 | 20 |
eye primordium | 2.58e-14 | 20 |
face | 4.01e-13 | 22 |
ectodermal placode | 1.20e-09 | 31 |
peripheral nervous system | 1.04e-08 | 8 |