FFCP PHASE1:Hg19::chr14:74892961..74892962,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646658 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32388 | |||
|TSSclassifier=strong | |||
|UniProt=A6NDD5,G3V402 | |||
|association_with_transcript=-156bp_to_ENST00000331628,ENST00000554953,NM_001105579,uc001xpx.2_5end | |||
|cluster_id=chr14:74892961..74892962,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_9_at_SYNDIG1L_5end | |||
|id=chr14:74892961..74892962,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.55e-98;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009663!6.12e-88!7;UBERON:0002308!1.51e-68!9;UBERON:0002420!1.51e-68!9;UBERON:0000125!1.51e-68!9;UBERON:0007245!1.51e-68!9;UBERON:0010009!1.51e-68!9;UBERON:0010011!1.51e-68!9;UBERON:0000454!1.51e-68!9;UBERON:0000369!2.60e-56!4;UBERON:0002435!2.60e-56!4;UBERON:0000204!2.60e-56!4;UBERON:0010082!2.60e-56!4;UBERON:0001875!6.61e-50!2;UBERON:0006514!6.61e-50!2;UBERON:0002780!1.56e-37!41;UBERON:0001890!1.56e-37!41;UBERON:0006240!1.56e-37!41;UBERON:0003080!1.15e-36!42;UBERON:0005383!3.33e-34!3;UBERON:0005382!3.33e-34!3;UBERON:0001049!3.07e-27!57;UBERON:0005068!3.07e-27!57;UBERON:0006241!3.07e-27!57;UBERON:0007135!3.07e-27!57;UBERON:0001869!5.03e-27!32;UBERON:0002616!2.45e-26!59;UBERON:0002791!3.08e-26!33;UBERON:0001874!3.58e-26!1;UBERON:0001882!5.93e-26!1;UBERON:0005403!5.93e-26!1;UBERON:0002022!1.26e-25!1;UBERON:0002020!1.70e-25!34;UBERON:0003528!1.70e-25!34;UBERON:0001893!1.70e-25!34;UBERON:0003056!1.71e-25!61;UBERON:0000955!2.79e-22!69;UBERON:0006238!2.79e-22!69;UBERON:0001017!7.53e-19!82;UBERON:0003075!3.34e-18!86;UBERON:0007284!3.34e-18!86;UBERON:0005743!5.37e-18!86;UBERON:0002346!2.09e-17!90;UBERON:0000073!2.48e-16!94;UBERON:0001016!2.48e-16!94;UBERON:0001894!3.53e-15!7;UBERON:0006222!3.53e-15!7;UBERON:0001873!6.43e-14!2;UBERON:0010122!6.43e-14!2;UBERON:0007023!8.82e-14!115;UBERON:0001897!1.21e-13!2;UBERON:0000033!1.12e-12!123;UBERON:0000153!4.26e-12!129;UBERON:0007811!4.26e-12!129;UBERON:0004121!3.38e-09!169;UBERON:0000924!5.50e-09!173;UBERON:0006601!5.50e-09!173;UBERON:0000025!4.25e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.55e-98;2!UBERON:0005383;2.39e-66;3!UBERON:0005382;2.39e-66;3!UBERON:0000369;3.10e-50;4!UBERON:0002435;3.10e-50;4!UBERON:0000204;3.10e-50;4!UBERON:0009663;1.78e-29;7!UBERON:0002420;2.62e-23;9!UBERON:0000125;2.62e-23;9!UBERON:0007245;2.62e-23;9!UBERON:0002308;2.62e-23;9!UBERON:0010009;2.62e-23;9!UBERON:0010011;2.62e-23;9!UBERON:0000454;2.62e-23;9!UBERON:0002780;4.53e-08;41!UBERON:0001890;4.53e-08;41!UBERON:0002791;2.32e-07;32!UBERON:0001869;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.55e-98,2;UBERON:0010122,1.55e-98,2;UBERON:0005383,2.39e-66,3;UBERON:0005382,2.39e-66,3;UBERON:0000369,3.10e-50,4;UBERON:0002435,3.10e-50,4;UBERON:0000204,3.10e-50,4;UBERON:0010082,3.10e-50,4;UBERON:0009663,1.78e-29,7;UBERON:0002420,2.62e-23,9;UBERON:0000125,2.62e-23,9;UBERON:0007245,2.62e-23,9;UBERON:0002308,2.62e-23,9;UBERON:0010009,2.62e-23,9;UBERON:0010011,2.62e-23,9;UBERON:0000454,2.62e-23,9;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5677537021303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@SYNDIG1L | |||
}} |
Latest revision as of 00:33, 16 September 2015
Short description: | p9@SYNDIG1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYNDIG1L_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -156bp_to_ENST00000331628, ENST00000554953, NM_001105579, uc001xpx.2_5end |
EntrezGene: | SYNDIG1L |
HGNC: | 32388 |
UniProt: | A6NDD5G3V402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.55e-98 | 2 |
future caudate nucleus | 1.55e-98 | 2 |
caudate-putamen | 2.39e-66 | 3 |
dorsal striatum | 2.39e-66 | 3 |
corpus striatum | 3.10e-50 | 4 |
striatum | 3.10e-50 | 4 |
ventral part of telencephalon | 3.10e-50 | 4 |
future corpus striatum | 3.10e-50 | 4 |
telencephalic nucleus | 1.78e-29 | 7 |
basal ganglion | 2.62e-23 | 9 |
neural nucleus | 2.62e-23 | 9 |
nuclear complex of neuraxis | 2.62e-23 | 9 |
nucleus of brain | 2.62e-23 | 9 |
aggregate regional part of brain | 2.62e-23 | 9 |
collection of basal ganglia | 2.62e-23 | 9 |
cerebral subcortex | 2.62e-23 | 9 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |