FFCP PHASE1:Hg19::chr6:149805982..149805989,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340152 | |EntrezGene=340152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21175 | |HGNC=21175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_uc003qmm.2,uc010kid.2_5end | |association_with_transcript=40bp_to_uc003qmm.2,uc010kid.2_5end | ||
|cluster_id=chr6:149805982..149805989,- | |||
|coexpression_cluster_id=C901 | |||
|description=CAGE_peak_9_at_ZC3H12D_5end | |description=CAGE_peak_9_at_ZC3H12D_5end | ||
|id=chr6:149805982..149805989,- | |id=chr6:149805982..149805989,- | ||
|ontology_enrichment_celltype=CL:0000838!5.85e-50!52;CL:0000542!7.98e-49!53;CL:0000051!7.98e-49!53;CL:0002031!1.36e-35!124;CL:0002087!1.85e-35!119;CL:0000738!5.54e-35!140;CL:0000988!1.67e-31!182;CL:0000945!7.31e-31!24;CL:0000826!7.31e-31!24;CL:0002032!2.41e-30!165;CL:0000837!2.41e-30!165;CL:0000037!5.83e-30!172;CL:0000566!5.83e-30!172;CL:0000624!4.57e-17!6;CL:0000791!4.46e-16!18;CL:0000789!4.46e-16!18;CL:0002420!4.46e-16!18;CL:0002419!4.46e-16!18;CL:0000790!4.46e-16!18;CL:0000084!2.54e-15!25;CL:0000827!2.54e-15!25;CL:0000236!3.35e-14!14;CL:0000898!2.05e-09!3;CL:0000623!1.64e-08!3;CL:0000825!1.64e-08!3;CL:0000134!4.79e-08!358;CL:0002320!1.19e-07!365;CL:0000840!2.76e-07!5;CL:0001029!2.76e-07!5;CL:0001014!7.20e-07!2;CL:0001016!7.20e-07!2;CL:0000815!8.97e-07!2;CL:0000792!8.97e-07!2;CL:0002677!8.97e-07!2 | |ontology_enrichment_celltype=CL:0000838!5.85e-50!52;CL:0000542!7.98e-49!53;CL:0000051!7.98e-49!53;CL:0002031!1.36e-35!124;CL:0002087!1.85e-35!119;CL:0000738!5.54e-35!140;CL:0000988!1.67e-31!182;CL:0000945!7.31e-31!24;CL:0000826!7.31e-31!24;CL:0002032!2.41e-30!165;CL:0000837!2.41e-30!165;CL:0000037!5.83e-30!172;CL:0000566!5.83e-30!172;CL:0000624!4.57e-17!6;CL:0000791!4.46e-16!18;CL:0000789!4.46e-16!18;CL:0002420!4.46e-16!18;CL:0002419!4.46e-16!18;CL:0000790!4.46e-16!18;CL:0000084!2.54e-15!25;CL:0000827!2.54e-15!25;CL:0000236!3.35e-14!14;CL:0000898!2.05e-09!3;CL:0000623!1.64e-08!3;CL:0000825!1.64e-08!3;CL:0000134!4.79e-08!358;CL:0002320!1.19e-07!365;CL:0000840!2.76e-07!5;CL:0001029!2.76e-07!5;CL:0001014!7.20e-07!2;CL:0001016!7.20e-07!2;CL:0000815!8.97e-07!2;CL:0000792!8.97e-07!2;CL:0002677!8.97e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000624;7.18e-63;6!CL:0000898;1.48e-32;3!CL:0001014;2.69e-22;2!CL:0001016;2.69e-22;2!CL:0000815;3.52e-22;2!CL:0000792;3.52e-22;2!CL:0002677;3.52e-22;2!CL:0000791;8.26e-21;18!CL:0000789;8.26e-21;18!CL:0002419;8.26e-21;18!CL:0000236;4.52e-20;13!CL:0000542;9.19e-20;53!CL:0000945;2.53e-15;24!CL:0000084;6.87e-15;25!CL:0000895;3.45e-12;1!CL:0000453;1.72e-09;5!CL:0000840;4.73e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.23e-62,6;CL:0000898,2.41e-32,3;CL:0000838,3.49e-32,52;CL:0000542,1.53e-31,53;CL:0000051,1.53e-31,53;CL:0001014,2.30e-22,2;CL:0001016,2.30e-22,2;CL:0000815,5.41e-22,2;CL:0000792,5.41e-22,2;CL:0002677,5.41e-22,2;CL:0000791,9.85e-21,18;CL:0000789,9.85e-21,18;CL:0002420,9.85e-21,18;CL:0002419,9.85e-21,18;CL:0000790,9.85e-21,18;CL:0000236,9.67e-19,14;CL:0002031,2.06e-17,120;CL:0000945,2.17e-15,24;CL:0000826,2.17e-15,24;CL:0000738,4.02e-15,136;CL:0000084,7.79e-15,25;CL:0000827,7.79e-15,25;CL:0002087,2.15e-13,115;CL:0002032,1.91e-12,161;CL:0000837,1.91e-12,161;CL:0000810,3.65e-12,1;CL:0000895,3.65e-12,1;CL:0002436,3.65e-12,1;CL:0002427,3.65e-12,1;CL:0002428,3.65e-12,1;CL:0002429,3.65e-12,1;CL:0002433,3.65e-12,1;CL:0002431,3.65e-12,1;CL:0002432,3.65e-12,1;CL:0000037,7.76e-12,168;CL:0000988,4.01e-11,177;CL:0000453,1.62e-09,5;CL:0000840,4.50e-08,5;CL:0001029,4.50e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000790;8.26e-21;18!CL:0000051;9.19e-20;53!CL:0002427;3.45e-12;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.32e-11!10 | |ontology_enrichment_disease=DOID:0060058!1.32e-11!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.87e-07!3;UBERON:0004854!1.87e-07!3;UBERON:0009034!1.87e-07!3;UBERON:0002095!1.87e-07!3;UBERON:0004782!1.87e-07!3;UBERON:0003281!1.87e-07!3;UBERON:0009664!1.87e-07!3;UBERON:0002296!1.87e-07!3;UBERON:0005602!1.87e-07!3;UBERON:0001179!1.87e-07!3;UBERON:0006293!1.87e-07!3;UBERON:0002384!4.09e-07!375 | |ontology_enrichment_uberon=UBERON:0002106!1.87e-07!3;UBERON:0004854!1.87e-07!3;UBERON:0009034!1.87e-07!3;UBERON:0002095!1.87e-07!3;UBERON:0004782!1.87e-07!3;UBERON:0003281!1.87e-07!3;UBERON:0009664!1.87e-07!3;UBERON:0002296!1.87e-07!3;UBERON:0005602!1.87e-07!3;UBERON:0001179!1.87e-07!3;UBERON:0006293!1.87e-07!3;UBERON:0002384!4.09e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.328402357799783,0.472264687882075,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0.217010870715852,0,0.32389366601898,0.515151135268373,0.290796477559129,0,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,1.09227722252426,2.66852776159066,0,0,0,1.32208974556972,1.90810750907073,0.569212969109448,0,0.764546456250458,0,0,0,1.180258620683,1.57204305099666,2.2616164889946,0.167186495390678,2.60737813306872,0.473447805734733,0,0.891283655081389,1.17842362989935,1.55073726208535,0.812411591295047,0.768547918354051,0.780356085359269,0,0,0,0.14828656316206,0,0,0,2.29932296161153,1.03088233644789,1.26509846009751,0,0,0,0,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.50939302401662,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52424285499351,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.328402357799783,0.472264687882075,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0.217010870715852,0,0.32389366601898,0.515151135268373,0.290796477559129,0,0,0,0,0,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,1.09227722252426,2.66852776159066,0,0,0,1.32208974556972,1.90810750907073,0.569212969109448,0,0.764546456250458,0,0,0,1.180258620683,1.57204305099666,2.2616164889946,0.167186495390678,2.60737813306872,0.473447805734733,0,0.891283655081389,1.17842362989935,1.55073726208535,0.812411591295047,0.768547918354051,0.780356085359269,0,0,0,0.14828656316206,0,0,0,2.29932296161153,1.03088233644789,1.26509846009751,0,0,0,0,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.50939302401662,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.547364367646998,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52424285499351,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p9@ZC3H12D | |short_description=p9@ZC3H12D | ||
}} | }} |
Latest revision as of 02:21, 16 September 2015
Short description: | p9@ZC3H12D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZC3H12D_5end |
Coexpression cluster: | C901_immature_CD4_Natural_CD19_CD8_lymphoma_tonsil |
Association with transcript: | 40bp_to_uc003qmm.2, uc010kid.2_5end |
EntrezGene: | ZC3H12D |
HGNC: | 21175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data