FFCP PHASE1:Hg19::chr8:126010783..126010808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6713 | |EntrezGene=6713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11279 | |HGNC=11279 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJH9 | |UniProt=E5RJH9 | ||
|association_with_transcript=0bp_to_ENST00000521232_5end | |association_with_transcript=0bp_to_ENST00000521232_5end | ||
|cluster_id=chr8:126010783..126010808,+ | |||
|description=CAGE_peak_2_at_SQLE_5end | |description=CAGE_peak_2_at_SQLE_5end | ||
|id=chr8:126010783..126010808,+ | |id=chr8:126010783..126010808,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.67e-24!679;CL:0000004!1.67e-24!679;CL:0000255!1.67e-24!679;CL:0000012!1.51e-23!682;CL:0000144!9.17e-19!625;CL:0002371!1.57e-18!591;CL:0000220!1.91e-16!246;CL:0002321!6.22e-16!248;CL:0000055!4.44e-13!180;CL:0000003!1.57e-12!722;CL:0000066!1.76e-11!254;CL:0000063!1.31e-09!578;CL:0000221!2.00e-07!71;CL:0000183!4.69e-07!59;CL:0000680!7.94e-07!57;CL:0000056!7.94e-07!57;CL:0000355!7.94e-07!57 | |ontology_enrichment_celltype=CL:0000548!1.67e-24!679;CL:0000004!1.67e-24!679;CL:0000255!1.67e-24!679;CL:0000012!1.51e-23!682;CL:0000144!9.17e-19!625;CL:0002371!1.57e-18!591;CL:0000220!1.91e-16!246;CL:0002321!6.22e-16!248;CL:0000055!4.44e-13!180;CL:0000003!1.57e-12!722;CL:0000066!1.76e-11!254;CL:0000063!1.31e-09!578;CL:0000221!2.00e-07!71;CL:0000183!4.69e-07!59;CL:0000680!7.94e-07!57;CL:0000056!7.94e-07!57;CL:0000355!7.94e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.33e-16,250;CL:0000066,2.76e-11,253;CL:0000221,1.45e-07,72;CL:0000680,4.47e-07,58;CL:0000056,4.47e-07,58;CL:0000355,4.47e-07,58;CL:0000187,6.46e-07,55;CL:0000222,6.55e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.62e-13!143;UBERON:0000119!2.89e-12!312;UBERON:0000483!9.43e-12!309;UBERON:0000475!5.09e-11!365;UBERON:0002100!6.72e-11!216;UBERON:0000481!5.18e-10!347;UBERON:0000914!2.12e-09!83;UBERON:0002329!2.12e-09!83;UBERON:0003077!2.12e-09!83;UBERON:0003059!2.12e-09!83;UBERON:0007282!2.12e-09!83;UBERON:0009618!2.12e-09!83;UBERON:0007285!2.12e-09!83;UBERON:0000486!8.98e-09!82;UBERON:0003104!1.37e-08!238;UBERON:0009142!1.37e-08!238;UBERON:0004290!3.53e-07!70;UBERON:0001048!6.47e-07!168;UBERON:0005085!9.17e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;3.71e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,7.09e-13,309;UBERON:0000483,2.38e-12,306;UBERON:0003104,3.50e-10,160;UBERON:0009142,3.50e-10,160;UBERON:0005256,1.84e-09,122;UBERON:0000486,5.38e-09,83;UBERON:0002100,1.15e-08,199;UBERON:0001048,1.19e-08,160;UBERON:0000490,3.13e-08,148;UBERON:0007503,7.56e-08,78;UBERON:0002329,2.16e-07,71;UBERON:0003059,2.16e-07,71;UBERON:0007282,2.16e-07,71;UBERON:0004290,2.16e-07,71;UBERON:0009618,2.16e-07,71;UBERON:0007524,3.35e-07,73;UBERON:0003077,3.63e-07,72;UBERON:0007285,3.63e-07,72;UBERON:0005085,9.40e-07,31 | |||
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| ||
|short_description=p2@SQLE | |short_description=p2@SQLE | ||
}} | }} |
Latest revision as of 02:36, 16 September 2015
Short description: | p2@SQLE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SQLE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000521232_5end |
EntrezGene: | SQLE |
HGNC: | 11279 |
UniProt: | E5RJH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.33e-16 | 250 |
epithelial cell | 2.76e-11 | 253 |
ectodermal cell | 1.45e-07 | 72 |
muscle precursor cell | 4.47e-07 | 58 |
myoblast | 4.47e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.47e-07 | 58 |
muscle cell | 6.46e-07 | 55 |
mesodermal cell | 6.55e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell layer | 7.09e-13 | 309 |
epithelium | 2.38e-12 | 306 |
mesenchyme | 3.50e-10 | 160 |
entire embryonic mesenchyme | 3.50e-10 | 160 |
trunk mesenchyme | 1.84e-09 | 122 |
multilaminar epithelium | 5.38e-09 | 83 |
trunk | 1.15e-08 | 199 |
primordium | 1.19e-08 | 160 |
unilaminar epithelium | 3.13e-08 | 148 |
epithelial vesicle | 7.56e-08 | 78 |
somite | 2.16e-07 | 71 |
presomitic mesoderm | 2.16e-07 | 71 |
presumptive segmental plate | 2.16e-07 | 71 |
dermomyotome | 2.16e-07 | 71 |
trunk paraxial mesoderm | 2.16e-07 | 71 |
dense mesenchyme tissue | 3.35e-07 | 73 |
paraxial mesoderm | 3.63e-07 | 72 |
presumptive paraxial mesoderm | 3.63e-07 | 72 |
ectodermal placode | 9.40e-07 | 31 |