FFCP PHASE1:Hg19::chr12:108523556..108523585,+: Difference between revisions
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|id=chr12:108523556..108523585,+
|short_description=p6@WSCD2
|description=CAGE_peak_6_at_WSCD2_5end
|association_with_transcript=0bp_to_ENST00000551638_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9671 | |EntrezGene=9671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29117 | |HGNC=29117 | ||
|TSSclassifier=strong | |||
|UniProt=F8W030 | |UniProt=F8W030 | ||
|association_with_transcript=0bp_to_ENST00000551638_5end | |||
|cluster_id=chr12:108523556..108523585,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_6_at_WSCD2_5end | |||
|id=chr12:108523556..108523585,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.86e-30;3!UBERON:0004874;5.30e-11;1!UBERON:0005754;1.05e-10;1!UBERON:0007123;8.34e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-45!115;UBERON:0001049!7.40e-31!57;UBERON:0005068!7.40e-31!57;UBERON:0006241!7.40e-31!57;UBERON:0007135!7.40e-31!57;UBERON:0001017!1.86e-29!82;UBERON:0005743!2.62e-29!86;UBERON:0000073!1.14e-26!94;UBERON:0001016!1.14e-26!94;UBERON:0002616!1.26e-25!59;UBERON:0002780!1.42e-25!41;UBERON:0001890!1.42e-25!41;UBERON:0006240!1.42e-25!41;UBERON:0003080!8.74e-25!42;UBERON:0003075!7.00e-24!86;UBERON:0007284!7.00e-24!86;UBERON:0002346!8.09e-24!90;UBERON:0002619!4.38e-23!22;UBERON:0000955!4.98e-23!69;UBERON:0006238!4.98e-23!69;UBERON:0001893!9.08e-23!34;UBERON:0001869!1.64e-22!32;UBERON:0002791!2.47e-21!33;UBERON:0002020!1.27e-20!34;UBERON:0003528!1.27e-20!34;UBERON:0001950!8.03e-20!20;UBERON:0000956!8.57e-20!25;UBERON:0000203!8.57e-20!25;UBERON:0003056!3.10e-16!61;UBERON:0000153!1.30e-14!129;UBERON:0007811!1.30e-14!129;UBERON:0000924!3.79e-14!173;UBERON:0006601!3.79e-14!173;UBERON:0004121!6.71e-14!169;UBERON:0000033!9.95e-14!123;UBERON:0001871!5.66e-11!7;UBERON:0000922!1.04e-08!612;UBERON:0000200!4.73e-08!6;UBERON:0003076!2.60e-07!15;UBERON:0003057!2.60e-07!15;UBERON:0002021!6.56e-07!5;UBERON:0000468!7.41e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.84e-20;2!UBERON:0002037;2.64e-15;6!UBERON:0000989;5.30e-11;1!UBERON:0008811;5.30e-11;1!UBERON:0000998;1.05e-10;1!UBERON:0006868;1.05e-10;1!UBERON:0002680;2.19e-10;9!UBERON:0001895;2.19e-10;9!UBERON:0002046;8.34e-09;5!UBERON:0002021;2.00e-08;5!UBERON:0004733;6.56e-08;12!UBERON:0002028;6.56e-08;12!UBERON:0004732;2.46e-07;13!UBERON:0000974;2.57e-07;6!UBERON:0007023;9.55e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.45e-20,2;UBERON:0002037,2.71e-15,6;UBERON:0006215,2.71e-15,6;UBERON:0007023,5.57e-12,114;UBERON:0000989,5.57e-11,1;UBERON:0008811,5.57e-11,1;UBERON:0006258,5.57e-11,1;UBERON:0005876,5.57e-11,1;UBERON:0004874,5.57e-11,1;UBERON:0000998,6.14e-11,1;UBERON:0006868,6.14e-11,1;UBERON:0002680,2.23e-10,9;UBERON:0001895,2.23e-10,9;UBERON:0010092,2.23e-10,9;UBERON:0002046,8.34e-09,5;UBERON:0004117,8.34e-09,5;UBERON:0007689,8.34e-09,5;UBERON:0007123,8.34e-09,5;UBERON:0003091,8.34e-09,5;UBERON:0002021,2.08e-08,5;UBERON:0004733,6.64e-08,12;UBERON:0002028,6.64e-08,12;UBERON:0007277,6.64e-08,12;UBERON:0004732,2.48e-07,13 | |||
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| ||
|short_description=p6@WSCD2 | |||
}} | }} |
Latest revision as of 04:07, 16 September 2015
Short description: | p6@WSCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WSCD2_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 0bp_to_ENST00000551638_5end |
EntrezGene: | WSCD2 |
HGNC: | 29117 |
UniProt: | F8W030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.45e-20 | 2 |
cerebellum | 2.71e-15 | 6 |
rhombic lip | 2.71e-15 | 6 |
adult organism | 5.57e-12 | 114 |
penis | 5.57e-11 | 1 |
intromittent organ | 5.57e-11 | 1 |
lateral plate mesenchyme | 5.57e-11 | 1 |
undifferentiated genital tubercle | 5.57e-11 | 1 |
somatopleure | 5.57e-11 | 1 |
seminal vesicle | 6.14e-11 | 1 |
seminal fluid secreting gland | 6.14e-11 | 1 |
regional part of metencephalon | 2.23e-10 | 9 |
metencephalon | 2.23e-10 | 9 |
future metencephalon | 2.23e-10 | 9 |
thyroid gland | 8.34e-09 | 5 |
pharyngeal pouch | 8.34e-09 | 5 |
thyroid diverticulum | 8.34e-09 | 5 |
pharyngeal pouch 2 | 8.34e-09 | 5 |
thyroid primordium | 8.34e-09 | 5 |
occipital lobe | 2.08e-08 | 5 |
segmental subdivision of hindbrain | 6.64e-08 | 12 |
hindbrain | 6.64e-08 | 12 |
presumptive hindbrain | 6.64e-08 | 12 |
segmental subdivision of nervous system | 2.48e-07 | 13 |