FFCP PHASE1:Hg19::chr3:15469006..15469043,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131965 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28343 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCB7 | |||
|association_with_transcript=0bp_to_ENST00000383789,ENST00000383790,ENST00000443029,NM_152396,uc003bzs.1,uc003bzt.1,uc011avp.1_5end | |||
|cluster_id=chr3:15469006..15469043,- | |||
|description=CAGE_peak_1_at_METTL6_5end | |||
|id=chr3:15469006..15469043,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.63e-08!239;DOID:0050687!3.79e-08!143;DOID:162!1.53e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.66e-08,239;DOID:0050687,3.84e-08,143;DOID:162,1.54e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.34e-18!94;UBERON:0001016!9.34e-18!94;UBERON:0002780!7.41e-17!41;UBERON:0001890!7.41e-17!41;UBERON:0006240!7.41e-17!41;UBERON:0003080!2.55e-16!42;UBERON:0001049!3.87e-16!57;UBERON:0005068!3.87e-16!57;UBERON:0006241!3.87e-16!57;UBERON:0007135!3.87e-16!57;UBERON:0000924!2.39e-15!173;UBERON:0006601!2.39e-15!173;UBERON:0005743!3.78e-15!86;UBERON:0000955!5.49e-15!69;UBERON:0006238!5.49e-15!69;UBERON:0002346!6.19e-15!90;UBERON:0004121!7.64e-15!169;UBERON:0001017!9.45e-15!82;UBERON:0003075!1.71e-14!86;UBERON:0007284!1.71e-14!86;UBERON:0001893!3.67e-14!34;UBERON:0003056!9.02e-14!61;UBERON:0002791!1.29e-13!33;UBERON:0002616!1.64e-13!59;UBERON:0001869!3.37e-13!32;UBERON:0002020!7.28e-13!34;UBERON:0003528!7.28e-13!34;UBERON:0000153!7.36e-13!129;UBERON:0007811!7.36e-13!129;UBERON:0000033!7.63e-13!123;UBERON:0001950!1.58e-11!20;UBERON:0002619!2.97e-11!22;UBERON:0000956!6.14e-11!25;UBERON:0000203!6.14e-11!25;UBERON:0000475!5.82e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.63e-12;41!UBERON:0001890;1.63e-12;41!UBERON:0001893;7.78e-12;34!UBERON:0002791;1.18e-11;32!UBERON:0001869;1.20e-11;32!UBERON:0001950;2.78e-11;20!UBERON:0002619;5.74e-11;22!UBERON:0003528;8.54e-11;34!UBERON:0002020;8.54e-11;34!UBERON:0000956;1.05e-10;25!UBERON:0000203;1.05e-10;25!UBERON:0000073;3.00e-10;53!UBERON:0002616;3.00e-10;53!UBERON:0000955;3.49e-08;68!UBERON:0001016;2.54e-07;83!UBERON:0001017;6.41e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-17,89;UBERON:0002780,7.41e-17,41;UBERON:0001890,7.41e-17,41;UBERON:0003080,7.41e-17,41;UBERON:0006240,7.41e-17,41;UBERON:0001049,1.49e-16,56;UBERON:0005068,1.49e-16,56;UBERON:0006241,1.49e-16,56;UBERON:0007135,1.49e-16,56;UBERON:0000073,1.44e-15,53;UBERON:0002616,1.44e-15,53;UBERON:0002346,1.80e-15,86;UBERON:0000955,2.58e-15,68;UBERON:0006238,2.58e-15,68;UBERON:0004121,2.63e-15,171;UBERON:0000924,2.63e-15,171;UBERON:0006601,2.63e-15,171;UBERON:0003075,4.87e-15,82;UBERON:0007284,4.87e-15,82;UBERON:0001017,4.92e-15,81;UBERON:0003056,1.14e-14,61;UBERON:0001893,3.67e-14,34;UBERON:0010371,1.50e-13,104;UBERON:0001869,3.37e-13,32;UBERON:0002791,4.74e-13,32;UBERON:0010314,5.01e-13,132;UBERON:0003528,7.28e-13,34;UBERON:0002020,7.28e-13,34;UBERON:0011216,4.24e-12,223;UBERON:0001950,1.58e-11,20;UBERON:0002619,2.97e-11,22;UBERON:0000956,6.13e-11,25;UBERON:0000203,6.13e-11,25 | |||
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| |||
|short_description=p1@METTL6 | |||
}} |
Latest revision as of 04:21, 16 September 2015
Short description: | p1@METTL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_METTL6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000383789, ENST00000383790, ENST00000443029, NM_152396, uc003bzs.1, uc003bzt.1, uc011avp.1_5end |
EntrezGene: | METTL6 |
HGNC: | 28343 |
UniProt: | Q8TCB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.19e-17 | 89 |
regional part of forebrain | 7.41e-17 | 41 |
forebrain | 7.41e-17 | 41 |
anterior neural tube | 7.41e-17 | 41 |
future forebrain | 7.41e-17 | 41 |
neural tube | 1.49e-16 | 56 |
neural rod | 1.49e-16 | 56 |
future spinal cord | 1.49e-16 | 56 |
neural keel | 1.49e-16 | 56 |
regional part of nervous system | 1.44e-15 | 53 |
regional part of brain | 1.44e-15 | 53 |
neurectoderm | 1.80e-15 | 86 |
brain | 2.58e-15 | 68 |
future brain | 2.58e-15 | 68 |
ectoderm-derived structure | 2.63e-15 | 171 |
ectoderm | 2.63e-15 | 171 |
presumptive ectoderm | 2.63e-15 | 171 |
neural plate | 4.87e-15 | 82 |
presumptive neural plate | 4.87e-15 | 82 |
central nervous system | 4.92e-15 | 81 |
pre-chordal neural plate | 1.14e-14 | 61 |
telencephalon | 3.67e-14 | 34 |
ecto-epithelium | 1.50e-13 | 104 |
cerebral hemisphere | 3.37e-13 | 32 |
regional part of telencephalon | 4.74e-13 | 32 |
structure with developmental contribution from neural crest | 5.01e-13 | 132 |
brain grey matter | 7.28e-13 | 34 |
gray matter | 7.28e-13 | 34 |
organ system subdivision | 4.24e-12 | 223 |
neocortex | 1.58e-11 | 20 |
regional part of cerebral cortex | 2.97e-11 | 22 |
cerebral cortex | 6.13e-11 | 25 |
pallium | 6.13e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.66e-08 | 239 |
cell type cancer | 3.84e-08 | 143 |
cancer | 1.54e-07 | 235 |