FFCP PHASE1:Hg19::chr3:154797486..154797518,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=50bp_to_ENST00000460393,ENST00000491597,NM_000902,uc003fab.1_5end | |association_with_transcript=50bp_to_ENST00000460393,ENST00000491597,NM_000902,uc003fab.1_5end | ||
|cluster_id=chr3:154797486..154797518,+ | |||
|coexpression_cluster_id=C1513 | |coexpression_cluster_id=C1513 | ||
|description=CAGE_peak_10_at_MME_5end | |description=CAGE_peak_10_at_MME_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.72e-25!180;CL:0000057!1.29e-14!75;CL:0002620!3.02e-12!23;CL:0000680!3.38e-10!57;CL:0000056!3.38e-10!57;CL:0000355!3.38e-10!57;CL:0000048!1.80e-09!430;CL:0000187!6.55e-09!54;CL:0000034!6.94e-09!444;CL:0000723!1.00e-08!436;CL:0000393!2.81e-07!60;CL:0000211!2.81e-07!60;CL:0000183!5.88e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.72e-25!180;CL:0000057!1.29e-14!75;CL:0002620!3.02e-12!23;CL:0000680!3.38e-10!57;CL:0000056!3.38e-10!57;CL:0000355!3.38e-10!57;CL:0000048!1.80e-09!430;CL:0000187!6.55e-09!54;CL:0000034!6.94e-09!444;CL:0000723!1.00e-08!436;CL:0000393!2.81e-07!60;CL:0000211!2.81e-07!60;CL:0000183!5.88e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.50e-18;23!CL:0000188;7.93e-09;9!CL:0000723;1.63e-08;61!CL:0000134;4.12e-08;55!CL:0000680;1.00e-07;7!CL:0000048;1.10e-07;58!CL:0000034;2.62e-07;69!CL:0000057;4.33e-07;73!CL:0002551;5.63e-07;6 | |ontology_enrichment_celltype_v019=CL:0002620;2.50e-18;23!CL:0000188;7.93e-09;9!CL:0000723;1.63e-08;61!CL:0000134;4.12e-08;55!CL:0000680;1.00e-07;7!CL:0000048;1.10e-07;58!CL:0000034;2.62e-07;69!CL:0000057;4.33e-07;73!CL:0002551;5.63e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.13e-18,23;CL:0000057,1.58e-16,76;CL:0000048,5.44e-15,427;CL:0000723,3.11e-14,433;CL:0000034,3.93e-14,441;CL:0000219,1.15e-09,386;CL:0000680,9.28e-09,58;CL:0000056,9.28e-09,58;CL:0000355,9.28e-09,58;CL:0000188,1.07e-08,9;CL:0000134,2.13e-08,354;CL:0002320,4.87e-08,361;CL:0000187,3.26e-07,55;CL:0002551,6.89e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.37e-16!83;UBERON:0002329!4.37e-16!83;UBERON:0003077!4.37e-16!83;UBERON:0003059!4.37e-16!83;UBERON:0007282!4.37e-16!83;UBERON:0009618!4.37e-16!83;UBERON:0007285!4.37e-16!83;UBERON:0004290!1.88e-13!70;UBERON:0000486!5.31e-11!82;UBERON:0002199!5.39e-11!45;UBERON:0002416!5.39e-11!45;UBERON:0003102!1.95e-10!95;UBERON:0001134!1.14e-09!61;UBERON:0002036!1.14e-09!61;UBERON:0003082!1.14e-09!61;UBERON:0002385!2.03e-09!63;UBERON:0001015!2.03e-09!63;UBERON:0000383!2.03e-09!63;UBERON:0005256!2.24e-09!143;UBERON:0002097!2.86e-09!40;UBERON:0002100!5.67e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!4.37e-16!83;UBERON:0002329!4.37e-16!83;UBERON:0003077!4.37e-16!83;UBERON:0003059!4.37e-16!83;UBERON:0007282!4.37e-16!83;UBERON:0009618!4.37e-16!83;UBERON:0007285!4.37e-16!83;UBERON:0004290!1.88e-13!70;UBERON:0000486!5.31e-11!82;UBERON:0002199!5.39e-11!45;UBERON:0002416!5.39e-11!45;UBERON:0003102!1.95e-10!95;UBERON:0001134!1.14e-09!61;UBERON:0002036!1.14e-09!61;UBERON:0003082!1.14e-09!61;UBERON:0002385!2.03e-09!63;UBERON:0001015!2.03e-09!63;UBERON:0000383!2.03e-09!63;UBERON:0005256!2.24e-09!143;UBERON:0002097!2.86e-09!40;UBERON:0002100!5.67e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.80e-11;41!UBERON:0002199;6.29e-10;46!UBERON:0002416;6.29e-10;46!UBERON:0003102;1.45e-09;50!UBERON:0001134;1.02e-08;16!UBERON:0002036;1.02e-08;16!UBERON:0002067;1.51e-08;9!UBERON:0002385;3.03e-07;31!UBERON:0001015;3.03e-07;31!UBERON:0000383;3.03e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.80e-11;41!UBERON:0002199;6.29e-10;46!UBERON:0002416;6.29e-10;46!UBERON:0003102;1.45e-09;50!UBERON:0001134;1.02e-08;16!UBERON:0002036;1.02e-08;16!UBERON:0002067;1.51e-08;9!UBERON:0002385;3.03e-07;31!UBERON:0001015;3.03e-07;31!UBERON:0000383;3.03e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.22e-16,46;UBERON:0002416,3.22e-16,46;UBERON:0002097,2.50e-15,41;UBERON:0007524,3.54e-13,73;UBERON:0002329,5.82e-13,71;UBERON:0003059,5.82e-13,71;UBERON:0007282,5.82e-13,71;UBERON:0004290,5.82e-13,71;UBERON:0009618,5.82e-13,71;UBERON:0003077,1.31e-12,72;UBERON:0007285,1.31e-12,72;UBERON:0003102,6.02e-12,99;UBERON:0007503,1.04e-10,78;UBERON:0000486,4.58e-10,83;UBERON:0002067,1.82e-08,9;UBERON:0004016,1.82e-08,9;UBERON:0010083,1.82e-08,9;UBERON:0001134,3.30e-08,62;UBERON:0002036,3.30e-08,62;UBERON:0003082,3.30e-08,62;UBERON:0002385,1.11e-07,64;UBERON:0001015,1.11e-07,64;UBERON:0000383,1.11e-07,64;UBERON:0002384,1.83e-07,371 | |||
|phase1_expression=9.81063248061006,10.4909256706582,1.55049844505568,3.00219895059391,0.446961094427288,0,7.59899634504932,3.79031924056099,2.35067065379855,0,0,0.436882744260345,0,0.37129905888014,0.331397375727916,1.34465029290355,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,5.26776963946051,1.70603078984906,0.293600439334847,0,0,0,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0,1.26584954976354,0,0,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,1.79007586580942,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.378139268656271,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0.516833518338658,1.42306505074684,0.33472061276467,0,0,0,0.367663080345869,0,0.357198913136319,0,0,0,0,0,15.8136500923276,50.4114343392823,0,0,0.759783069987479,3.04541115870403,4.30254931123221,0.354668382198357,0,0,0.24666754841716,2.48968828319813,0.67355336034844,1.79808093424805,0,0,1.87457145467037,7.17968176709737,2.2818872861778,4.03511437489863,9.51219439014496,7.28428249656592,7.86524517532592,1.83738754129404,2.94802361548243,1.85986406116378,35.6400857184616,9.64341024186372,0,0,4.71341119071385,3.00284447692714,6.37247465613621,3.5118209670467,0.30648779579902,6.46023653298366,0.226864366320042,3.58779271377724,15.5896893837554,13.1397778718928,2.10063767259082,4.94652140344507,15.7160729427834,8.74749224758472,3.54430297706659,8.08727142837949,1.51460264546469,7.36399189138395,1.2931684545505,3.55009592516614,2.21654616100809,1.3564847384839,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0,0,4.69348596989448,1.28648187638577,1.38134921352481,4.64367928031979,7.94067429836544,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,2.20731549707325,0,2.05881372358231,0,0,0,0.0925884451585296,1.62904152655162,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0.468008530278475,0,0.93733833986777,0.335964256397719,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0.12624243342638,11.3661230782983,4.96584953225761,1.17217447210047,0,2.36503233217644,18.020583470635,1.42913216315289,0.112131084345361,0,0.4400297149257,3.61960804121778,0,3.381211010224,5.31876233169741,5.2003718455683,0.257207374262142,0,0,3.28849385413739,7.5967024754802,9.87888404136923,4.88604276440603,1.06617584622764,24.5505080609363,0,0,0,0,0,0,0.239624855491583,0,4.27910715122155,6.80472141337622,1.43833425785268,15.5783038018709,0,0,0,0,0.508189248444927,0,0,0,0,44.9404214368309,59.832291840805,83.7119337140792,0.613457458595699,0,1.35632511849868,0,0.356857977594324,0.630809660135739,0,8.72743689210385,4.5481500811197,1.03473071292505,0,0.184369168541703,25.9782007259568,0,0,0,0,0,0.303127571446259,0,0.907170879989041,5.95458738765064,11.9700339164689,11.507063871756,0.256278298511402,4.60536524160033,0,0,0.771048469013278,0.710246901252508,0.98552587216571,0.519254429183621,0.464841513839837,0.120859449591622,0.200506470303285,0.368323955743585,1.60740227430449,0.728364672026868,2.62248829918848,0,0.924184045252977,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0,2.27764876265012,0.206082023295445,3.11336180382368,4.37300349579116,1.72279661398852,0,0,4.93020663289822,2.15668063960502,1.22802939780904,8.27019434907183,14.7165735469535,9.86113518616754,3.32383846922794,3.38321735457602,0,0,0.127612712494584,0.10115778085555,0.464845549297286,25.4998000932818,0.6970372701606,1.84820148105653,0.532306030317022,0,0.37064843820784,0.143124886741991,2.60510858551767,0.632758849437452,5.52827562379092,0.511795582622668,3.42351190427136,0.636406495851874,0,11.3319648277488,3.56898138656871,2.00281083987667,0.404364963146632,0,0.421258456238981,0,1.70599442741899,4.22600587027022,3.68549760801562,5.09059555033366,1.13008116620243,0.551365343546124,0,0,0,1.9676842561399,0.405820753925408,0.92947049429925,0.281695602532241,59.2288884602733,76.5360029492214,0,3.54761064070598,0.422215270595328,0.329294892959902,1.13841952129715,2.44954304171488,0,0,0,0.282431402330337,0,0,0,0,7.10426652925037,7.64637207142375,5.12682468456746,6.90872148827588,9.46133228098247,12.9694662238543,12.4207230564766,3.96562588147135,12.3915922507869,0,0,0,17.7451131961027,1.20941133692304,0,0,0,0,0,0,0,0,0,2.70866844482565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,2.79129200023881,0,0,2.3874448473769,0,2.15012491469462,0,0,7.5689919415576,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0.179736702294654,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0.508507300585533,0.472775363535873,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| ||
|short_description=p10@MME | |short_description=p10@MME | ||
}} | }} |
Latest revision as of 04:41, 16 September 2015
Short description: | p10@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MME_5end |
Coexpression cluster: | C1513_Smooth_Neutrophils_Eosinophils_Pancreatic_Mesenchymal_Skeletal_mesenchymal |
Association with transcript: | 50bp_to_ENST00000460393, ENST00000491597, NM_000902, uc003fab.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.13e-18 | 23 |
fibroblast | 1.58e-16 | 76 |
multi fate stem cell | 5.44e-15 | 427 |
somatic stem cell | 3.11e-14 | 433 |
stem cell | 3.93e-14 | 441 |
motile cell | 1.15e-09 | 386 |
muscle precursor cell | 9.28e-09 | 58 |
myoblast | 9.28e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.28e-09 | 58 |
cell of skeletal muscle | 1.07e-08 | 9 |
mesenchymal cell | 2.13e-08 | 354 |
connective tissue cell | 4.87e-08 | 361 |
muscle cell | 3.26e-07 | 55 |
fibroblast of dermis | 6.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 3.22e-16 | 46 |
integumental system | 3.22e-16 | 46 |
skin of body | 2.50e-15 | 41 |
dense mesenchyme tissue | 3.54e-13 | 73 |
somite | 5.82e-13 | 71 |
presomitic mesoderm | 5.82e-13 | 71 |
presumptive segmental plate | 5.82e-13 | 71 |
dermomyotome | 5.82e-13 | 71 |
trunk paraxial mesoderm | 5.82e-13 | 71 |
paraxial mesoderm | 1.31e-12 | 72 |
presumptive paraxial mesoderm | 1.31e-12 | 72 |
surface structure | 6.02e-12 | 99 |
epithelial vesicle | 1.04e-10 | 78 |
multilaminar epithelium | 4.58e-10 | 83 |
dermis | 1.82e-08 | 9 |
dermatome | 1.82e-08 | 9 |
future dermis | 1.82e-08 | 9 |
skeletal muscle tissue | 3.30e-08 | 62 |
striated muscle tissue | 3.30e-08 | 62 |
myotome | 3.30e-08 | 62 |
muscle tissue | 1.11e-07 | 64 |
musculature | 1.11e-07 | 64 |
musculature of body | 1.11e-07 | 64 |
connective tissue | 1.83e-07 | 371 |