FFCP PHASE1:Hg19::chr2:238600789..238600925,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9208 | |EntrezGene=9208 | ||
| Line 8: | Line 8: | ||
|UniProt=E7EVD7,B4DPC0,Q32MZ4 | |UniProt=E7EVD7,B4DPC0,Q32MZ4 | ||
|association_with_transcript=0bp_to_ENST00000244815,ENST00000391999,NM_001137551,NM_001137552,NM_001137553,NM_004735,uc002vxd.2,uc002vxe.2,uc002vxf.2,uc010znm.1_5end | |association_with_transcript=0bp_to_ENST00000244815,ENST00000391999,NM_001137551,NM_001137552,NM_001137553,NM_004735,uc002vxd.2,uc002vxe.2,uc002vxf.2,uc010znm.1_5end | ||
|cluster_id=chr2:238600789..238600925,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_LRRFIP1_5end | |description=CAGE_peak_1_at_LRRFIP1_5end | ||
Latest revision as of 04:42, 16 September 2015
| Short description: | p1@LRRFIP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LRRFIP1_5end |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | 0bp_to_ENST00000244815, ENST00000391999, NM_001137551, NM_001137552, NM_001137553, NM_004735, uc002vxd.2, uc002vxe.2, uc002vxf.2, uc010znm.1_5end |
| EntrezGene: | LRRFIP1 |
| HGNC: | 6702 |
| UniProt: | E7EVD7B4DPC0Q32MZ4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@LRRFIP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 4.26e-54 | 136 |
| hematopoietic stem cell | 2.30e-52 | 168 |
| hematopoietic oligopotent progenitor cell | 2.12e-49 | 161 |
| hematopoietic multipotent progenitor cell | 2.12e-49 | 161 |
| hematopoietic cell | 1.48e-48 | 177 |
| hematopoietic lineage restricted progenitor cell | 2.38e-42 | 120 |
| nongranular leukocyte | 4.02e-42 | 115 |
| myeloid leukocyte | 3.00e-41 | 72 |
| myeloid cell | 8.48e-39 | 108 |
| common myeloid progenitor | 8.48e-39 | 108 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.00e-40 | 98 |
| blood island | 2.00e-40 | 98 |
| hemolymphoid system | 1.06e-38 | 108 |
| bone marrow | 2.58e-32 | 76 |
| immune system | 7.71e-32 | 93 |
| bone element | 8.32e-29 | 82 |
| skeletal element | 6.23e-24 | 90 |
| skeletal system | 2.64e-21 | 100 |
| lateral plate mesoderm | 4.53e-21 | 203 |
| connective tissue | 4.41e-19 | 371 |
Showing 1 to 10 of 16 entries
