FFCP PHASE1:Hg19::chr14:77227901..77227915,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19964 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L8A9 | |||
|association_with_transcript=-319bp_to_NM_014909,uc001xss.2,uc001xst.2_5end | |||
|cluster_id=chr14:77227901..77227915,+ | |||
|description=CAGE_peak_4_at_VASH1_5end | |||
|id=chr14:77227901..77227915,+ | |||
|ontology_enrichment_celltype=CL:0000071!5.05e-17!18;CL:0002546!5.05e-17!18;CL:0000115!4.09e-15!35;CL:0002139!4.54e-15!24;CL:0002078!1.82e-10!44;CL:1000413!1.72e-09!9;CL:0002544!5.73e-07!6;CL:0002543!7.93e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.26e-42;18!CL:0002139;2.34e-38;24!CL:0000115;1.96e-37;36!CL:1000413;1.10e-24;9!CL:0002078;1.70e-19;45!CL:0002544;2.70e-17;6!CL:0002543;5.56e-17;6!CL:0000213;2.85e-15;58!CL:0000215;2.85e-15;58!CL:0002618;2.82e-09;3!CL:0002188;3.79e-09;5!CL:0002545;4.13e-07;2!CL:0002262;9.47e-07;2!CL:1000398;9.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.79e-43,36;CL:0000071,1.72e-42,18;CL:0002546,1.72e-42,18;CL:0002139,2.30e-38,24;CL:0002078,8.41e-33,45;CL:1000413,9.25e-25,9;CL:0000213,7.72e-24,58;CL:0000215,7.72e-24,58;CL:0002544,2.17e-17,6;CL:0002543,5.59e-17,6;CL:0000222,1.09e-10,121;CL:0002618,2.83e-09,3;CL:0002188,5.18e-09,5;CL:0000076,6.89e-09,63;CL:0002545,3.96e-07,2;CL:0002262,8.60e-07,2;CL:1000398,8.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;2.26e-42;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.05e-17!18;UBERON:0004638!5.05e-17!18;UBERON:0004852!5.05e-17!18;UBERON:0000073!8.34e-16!94;UBERON:0001016!8.34e-16!94;UBERON:0005743!1.83e-15!86;UBERON:0001017!2.09e-15!82;UBERON:0007023!8.84e-14!115;UBERON:0000025!1.10e-13!194;UBERON:0001049!6.28e-13!57;UBERON:0005068!6.28e-13!57;UBERON:0006241!6.28e-13!57;UBERON:0007135!6.28e-13!57;UBERON:0000955!1.68e-12!69;UBERON:0006238!1.68e-12!69;UBERON:0000487!2.02e-12!22;UBERON:0003075!4.70e-12!86;UBERON:0007284!4.70e-12!86;UBERON:0002346!7.01e-12!90;UBERON:0002616!4.03e-11!59;UBERON:0006914!5.84e-11!25;UBERON:0002780!1.73e-10!41;UBERON:0001890!1.73e-10!41;UBERON:0006240!1.73e-10!41;UBERON:0003080!5.32e-10!42;UBERON:0001893!6.24e-10!34;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0003915!1.72e-09!9;UBERON:0004700!1.72e-09!9;UBERON:0001917!1.72e-09!9;UBERON:0004872!1.97e-09!84;UBERON:0002791!2.41e-09!33;UBERON:0004111!5.44e-09!241;UBERON:0001869!6.40e-09!32;UBERON:0004535!9.71e-09!110;UBERON:0000477!1.17e-08!286;UBERON:0001009!1.45e-08!113;UBERON:0003056!1.81e-08!61;UBERON:0000119!6.36e-08!312;UBERON:0002619!8.51e-08!22;UBERON:0000483!1.01e-07!309;UBERON:0000922!1.08e-07!612;UBERON:0000924!3.50e-07!173;UBERON:0006601!3.50e-07!173;UBERON:0000153!3.58e-07!129;UBERON:0007811!3.58e-07!129;UBERON:0004121!3.80e-07!169;UBERON:0002049!7.85e-07!79;UBERON:0007798!7.85e-07!79;UBERON:0000033!8.39e-07!123;UBERON:0002050!9.41e-07!605;UBERON:0005423!9.41e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.26e-42;18!UBERON:0001986;2.26e-42;18!UBERON:0004852;2.26e-42;18!UBERON:0000487;8.77e-34;22!UBERON:0006914;3.76e-29;25!UBERON:0003915;1.10e-24;9!UBERON:0004700;1.10e-24;9!UBERON:0001917;1.10e-24;9!UBERON:0000490;2.40e-19;33!UBERON:0001638;4.73e-11;9!UBERON:0003920;4.73e-11;9!UBERON:0004582;4.73e-11;9!UBERON:0007500;7.56e-09;56!UBERON:0001981;7.56e-09;56!UBERON:0004537;7.56e-09;56!UBERON:0000055;2.28e-08;65!UBERON:0003914;2.63e-07;74!UBERON:0005800;4.13e-07;2!UBERON:0001515;4.13e-07;2!UBERON:0001281;9.47e-07;2!UBERON:0003497;9.47e-07;2!UBERON:0003909;9.47e-07;2!UBERON:0003835;9.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.72e-42,18;UBERON:0001986,1.72e-42,18;UBERON:0004852,1.72e-42,18;UBERON:0000487,7.04e-34,22;UBERON:0006914,3.11e-29,25;UBERON:0003915,9.25e-25,9;UBERON:0004700,9.25e-25,9;UBERON:0001917,9.25e-25,9;UBERON:0004872,1.04e-15,83;UBERON:0000025,4.62e-15,192;UBERON:0003914,2.05e-14,117;UBERON:0000055,2.56e-14,68;UBERON:0007500,4.15e-14,59;UBERON:0001981,4.15e-14,59;UBERON:0004537,4.15e-14,59;UBERON:0006965,4.15e-14,59;UBERON:0004535,1.89e-12,109;UBERON:0001009,6.34e-12,112;UBERON:0002049,9.64e-12,78;UBERON:0007798,9.64e-12,78;UBERON:0004111,1.92e-11,240;UBERON:0001638,4.75e-11,9;UBERON:0003920,4.75e-11,9;UBERON:0004582,4.75e-11,9;UBERON:0003081,1.88e-10,203;UBERON:0000483,8.69e-08,306;UBERON:0000119,1.31e-07,309;UBERON:0001016,1.39e-07,89;UBERON:0005800,3.96e-07,2;UBERON:0001515,3.96e-07,2;UBERON:0001017,4.31e-07,81;UBERON:0001281,8.60e-07,2;UBERON:0003497,8.60e-07,2;UBERON:0003909,8.60e-07,2;UBERON:0003835,8.60e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,5.66813915533214,2.91100873425379,0,3.28934310417461,0,0,0,0,0,0,0,0,2.45615535052061,0,0.612167784741805,4.17207735198922,0,0,0.797854630486527,0.852449501065388,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0.419317291016752,0.112328631146495,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.80254281490768,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,4.87613732627923,0.670700859703636,1.02290049474824,0,0,0,0.795285947051099,0,0.472674085820339,0.665188192387692,0.702678285545008,0.589405839739707,0,0,1.29818957461873,2.26368658489047,3.45690697349049,0,0,0.74291500265913,4.57153536943422,6.02164216574287,13.1913390610886,1.69592382577203,3.35599548967925,3.02629846134074,3.9709043641994,0,1.06729878806013,4.68608857870538,3.62546385398232,0.760272105718513,4.88124115096339,5.8826092855339,10.5318453224629,5.80448233846518,4.71511682514957,2.59006405111641,3.06633274931766,5.69559395740877,4.946447086121,0,0,0,0,0,0,0,0,1.12135520028461,0,0.49333509683432,1.8672662123986,0.67355336034844,0.490385709340376,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0.348581828608555,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59602091012043,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0.936017060556951,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0,0.1466765716419,0.129271715757778,3.57656445851882,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.385029108839245,0.508189248444927,6.50699269288109,6.18631050222156,4.02039036802437,8.93114252314428,0,0,0.414415513436035,0,0,0,0,0,0,0,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,2.27466768141793,1.02056223165909,3.88648648983851,26.2186329573492,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,2.40386496246191,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,1.90506224451495,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,1.9488432172667,0,0,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,15.9691038400955,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.663475559587348,0.886642856860642,0.87754158861589,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.494255755786011,0.835375596043643,0.67401132980677,0.802577647298789,0.702793337176017,0,0,0.242780379534093,0.394584402849391,1.20990716048664,14.6914925582635,0.252746318513952,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,0.633107959558787,0,0,0.426905989478705,0.19980960958213,0,0,0.343189995723929,0,0,0,0.135904206073614,0.418411385249333,0,0.288950589901519,1.20084057741958,0.273810757783986,0,0,0,1.39641200636127,0.458320848023367,0,0,0.429226048136571,0,1.5452198671947,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0.449947783103001,0.77380195455795,1.39723980313457,0,0.157611414598396,0.577000469484979,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0.339936274560377,0.146552233678082,0,1.0342636508924,0.26446520348538,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0,0.665574309221114,0.745156835296601,1.24513771442608,0,0,0,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,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| |||
|short_description=p4@VASH1 | |||
}} |
Latest revision as of 04:52, 16 September 2015
Short description: | p4@VASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -319bp_to_NM_014909, uc001xss.2, uc001xst.2_5end |
EntrezGene: | VASH1 |
HGNC: | 19964 |
UniProt: | Q7L8A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.79e-43 | 36 |
blood vessel endothelial cell | 1.72e-42 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.72e-42 | 18 |
endothelial cell of vascular tree | 2.30e-38 | 24 |
meso-epithelial cell | 8.41e-33 | 45 |
endothelial cell of artery | 9.25e-25 | 9 |
lining cell | 7.72e-24 | 58 |
barrier cell | 7.72e-24 | 58 |
aortic endothelial cell | 2.17e-17 | 6 |
vein endothelial cell | 5.59e-17 | 6 |
mesodermal cell | 1.09e-10 | 121 |
endothelial cell of umbilical vein | 2.83e-09 | 3 |
glomerular endothelial cell | 5.18e-09 | 5 |
squamous epithelial cell | 6.89e-09 | 63 |
thoracic aorta endothelial cell | 3.96e-07 | 2 |
endothelial cell of sinusoid | 8.60e-07 | 2 |
endothelial cell of hepatic sinusoid | 8.60e-07 | 2 |